Click here to switch to the map view.

The map label for this gene is 209695529

Identifier: 209695529

GI number: 209695529

Start: 2235303

End: 2235740

Strand: Reverse

Name: 209695529

Synonym: VSAL_I2083

Alternate gene names: NA

Gene position: 2235740-2235303 (Counterclockwise)

Preceding gene: 209695532

Following gene: 209695527

Centisome position: 67.24

GC content: 41.55

Gene sequence:

>438_bases
ATGGAGGCAAGTATGAAAAAAATAGGGATTGTTGCGTTATTCTCGTTTTCAGTGATGGCAACGGACTACTCTACAGAGAT
TGAATCTCGACAAGATAACTTTCAACACCTCGATGCAACGGTTGATTTACTCGATGACGCGTTTGATAAAGAGACGTTAG
ATTGGGATCGAATTATGCCGTTGGCGCAAAGTGCGCACTTAACAGTAGAAGAGCAAAAAACATTATTTCCAGAAGGCAGT
GCAGATAATAGTAGAGCACGAACTAAAATTTGGACTCAAAAATCCGAGTTTGAAGGAAAGTTTGATACCTTATCTCAGCA
ATTTATTTTGATCAGTGAAGCCGCTGTAGATCAAGATGAAGTGGCAGCACGAGCCGCGCTTGATAAAGCGTACGCTCAAT
GCCGTTCATGCCACATGAATTATCGTTCGTTGTGGTAA

Upstream 100 bases:

>100_bases
TCTAACAACCTATTTTCGTGTGTTTTTAAGAGTATTTTGCTAATGTTAATAAGTTCTCGTTAAATCGAAATCACCGCGAT
TTAACTGCATAAAGAAACGA

Downstream 100 bases:

>100_bases
TGGCATAATACCGTAAGATTACTCTTCAAAAATCTTATCGCGAATAGACCAAAACTTGCCTTGCTTACGAGCGATAACAA
AGCTTGGTGGACGGAATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MEASMKKIGIVALFSFSVMATDYSTEIESRQDNFQHLDATVDLLDDAFDKETLDWDRIMPLAQSAHLTVEEQKTLFPEGS
ADNSRARTKIWTQKSEFEGKFDTLSQQFILISEAAVDQDEVAARAALDKAYAQCRSCHMNYRSLW

Sequences:

>Translated_145_residues
MEASMKKIGIVALFSFSVMATDYSTEIESRQDNFQHLDATVDLLDDAFDKETLDWDRIMPLAQSAHLTVEEQKTLFPEGS
ADNSRARTKIWTQKSEFEGKFDTLSQQFILISEAAVDQDEVAARAALDKAYAQCRSCHMNYRSLW
>Mature_145_residues
MEASMKKIGIVALFSFSVMATDYSTEIESRQDNFQHLDATVDLLDDAFDKETLDWDRIMPLAQSAHLTVEEQKTLFPEGS
ADNSRARTKIWTQKSEFEGKFDTLSQQFILISEAAVDQDEVAARAALDKAYAQCRSCHMNYRSLW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16524; Mature: 16524

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS51009 CYTCII ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEASMKKIGIVALFSFSVMATDYSTEIESRQDNFQHLDATVDLLDDAFDKETLDWDRIMP
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LAQSAHLTVEEQKTLFPEGSADNSRARTKIWTQKSEFEGKFDTLSQQFILISEAAVDQDE
HHHCCCEEEECCHHCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHEEEEEHHHCCHHH
VAARAALDKAYAQCRSCHMNYRSLW
HHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MEASMKKIGIVALFSFSVMATDYSTEIESRQDNFQHLDATVDLLDDAFDKETLDWDRIMP
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LAQSAHLTVEEQKTLFPEGSADNSRARTKIWTQKSEFEGKFDTLSQQFILISEAAVDQDE
HHHCCCEEEECCHHCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHEEEEEHHHCCHHH
VAARAALDKAYAQCRSCHMNYRSLW
HHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA