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The map label for this gene is ybjE [H]

Identifier: 209695484

GI number: 209695484

Start: 2181204

End: 2182037

Strand: Reverse

Name: ybjE [H]

Synonym: VSAL_I2034

Alternate gene names: 209695484

Gene position: 2182037-2181204 (Counterclockwise)

Preceding gene: 209695485

Following gene: 209695483

Centisome position: 65.62

GC content: 39.93

Gene sequence:

>834_bases
ATGCTTTCTGGAATGTTATTTGTATTTTTACCACTATTATTTGGGTATTTAATCCCTTTTCATAAAAAAAAGCCACTTGA
GCATATAAATACGGCAACAAGTCACTTAGTTACCATTATTCTTGCTTTAATGGGGCTAAGCTTAGCCGCGTTAGATAATC
TCGCTCAGAACCTTAATCAAATTATGATTATCGCCACCACCTTCTTCATTGCTATCAGTGCATGCAATTTGGCGATATTA
CCGGTAATGGATAAGCTTTTCCCACTAAATTCCGAAGGCAATAAAAACTCACTTCCTCTTTTCAAAATGATTTTAGAATC
GGCTAAGTTACTGCTTGCTGTCGCTGGCGGACTTATCGTAGGCCTACTTAGTGGTATCGACTTATCTTGGGTTGAAAATG
CCAGTGAACTCATTTTGTTGCTCTTACTTTTTCTGATTGGTATCCAACTGCGTAATAGTGGTTTATCTCTACGCCAAATC
TTATTAAATAAACACGGAATGATTATTGCGGCTGTCATTATGGCAACCTCATTAGTTGGCGGAATTATTGCGGCCTTGTT
TCTAGATATTCCACTTCAGCATGGGTTAGCAATGGCATCAGGATTTGGTTGGTATTCTCTTGCTGGTATCCTAATGGGGG
ATGCACTTGGTCCTGTTTATGGTGGTGCTTCTTTTCTTAATGAATTGATGCGCGAACTCGTCGCTTTAATCATGATACCT
ATATTGATTCATCGTTACCCCTATCGGCTATGCAGGGGCAACCGCAATGGACTTTACTCTACCCGTAATACAAAATTGCG
GTGGTATTCGGTGCGTACCAATTGCCATTGTTAG

Upstream 100 bases:

>100_bases
GTGGCTTGTAATAAATTTACACAATCGATAACATTTGATTGCTCAACTATTTAAGCCTTGATATTCTCAAGGCCTCTTCA
TGGACTGAGTAAAATTTATT

Downstream 100 bases:

>100_bases
TGGCTTTATTCTTAGCTTATCCGTTCCTTTTCTAATGCTATTTTTTGTTTCTTTATAAGAGTTCAGTGGGAAACATCACA
CTGTGAGTCGTTTACATTGC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLSGMLFVFLPLLFGYLIPFHKKKPLEHINTATSHLVTIILALMGLSLAALDNLAQNLNQIMIIATTFFIAISACNLAIL
PVMDKLFPLNSEGNKNSLPLFKMILESAKLLLAVAGGLIVGLLSGIDLSWVENASELILLLLLFLIGIQLRNSGLSLRQI
LLNKHGMIIAAVIMATSLVGGIIAALFLDIPLQHGLAMASGFGWYSLAGILMGDALGPVYGGASFLNELMRELVALIMIP
ILIHRYPYRLCRGNRNGLYSTRNTKLRWYSVRTNCHC

Sequences:

>Translated_277_residues
MLSGMLFVFLPLLFGYLIPFHKKKPLEHINTATSHLVTIILALMGLSLAALDNLAQNLNQIMIIATTFFIAISACNLAIL
PVMDKLFPLNSEGNKNSLPLFKMILESAKLLLAVAGGLIVGLLSGIDLSWVENASELILLLLLFLIGIQLRNSGLSLRQI
LLNKHGMIIAAVIMATSLVGGIIAALFLDIPLQHGLAMASGFGWYSLAGILMGDALGPVYGGASFLNELMRELVALIMIP
ILIHRYPYRLCRGNRNGLYSTRNTKLRWYSVRTNCHC
>Mature_277_residues
MLSGMLFVFLPLLFGYLIPFHKKKPLEHINTATSHLVTIILALMGLSLAALDNLAQNLNQIMIIATTFFIAISACNLAIL
PVMDKLFPLNSEGNKNSLPLFKMILESAKLLLAVAGGLIVGLLSGIDLSWVENASELILLLLLFLIGIQLRNSGLSLRQI
LLNKHGMIIAAVIMATSLVGGIIAALFLDIPLQHGLAMASGFGWYSLAGILMGDALGPVYGGASFLNELMRELVALIMIP
ILIHRYPYRLCRGNRNGLYSTRNTKLRWYSVRTNCHC

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=246, Percent_Identity=47.5609756097561, Blast_Score=201, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 30269; Mature: 30269

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGMLFVFLPLLFGYLIPFHKKKPLEHINTATSHLVTIILALMGLSLAALDNLAQNLNQ
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMIIATTFFIAISACNLAILPVMDKLFPLNSEGNKNSLPLFKMILESAKLLLAVAGGLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLLSGIDLSWVENASELILLLLLFLIGIQLRNSGLSLRQILLNKHGMIIAAVIMATSLVG
HHHHCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
GIIAALFLDIPLQHGLAMASGFGWYSLAGILMGDALGPVYGGASFLNELMRELVALIMIP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ILIHRYPYRLCRGNRNGLYSTRNTKLRWYSVRTNCHC
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MLSGMLFVFLPLLFGYLIPFHKKKPLEHINTATSHLVTIILALMGLSLAALDNLAQNLNQ
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMIIATTFFIAISACNLAILPVMDKLFPLNSEGNKNSLPLFKMILESAKLLLAVAGGLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GLLSGIDLSWVENASELILLLLLFLIGIQLRNSGLSLRQILLNKHGMIIAAVIMATSLVG
HHHHCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
GIIAALFLDIPLQHGLAMASGFGWYSLAGILMGDALGPVYGGASFLNELMRELVALIMIP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ILIHRYPYRLCRGNRNGLYSTRNTKLRWYSVRTNCHC
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]