| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is grxB [H]
Identifier: 209695421
GI number: 209695421
Start: 2101503
End: 2102153
Strand: Reverse
Name: grxB [H]
Synonym: VSAL_I1961
Alternate gene names: 209695421
Gene position: 2102153-2101503 (Counterclockwise)
Preceding gene: 209695422
Following gene: 209695416
Centisome position: 63.22
GC content: 37.48
Gene sequence:
>651_bases ATGAAATTATTCATCTTTGATCACTGTCCGTTTTGCATGAAAGCAAAAATGGTCGCAGGAATAAAAAATCTTCCTGTTGA ATTTACTTACCTTCAAAATGATGATGTCGATACGCGTATCGAAATGGTGGGGGCAAATATGGTACCTATTTTAGAGAAAG ACGACGGCACCTACATGGCTGAAAGCCTTGATATTGCAAAATACCTCGACGAAAACGACCATTATCCGGTCATTGAACAA GGTACTTGTGCTGATGATATTTCAGAATGGTTAAGTAACGTTCGTCCTTTATTTAATAAATTGACCTTTCCTCGTTGGAC TAAATTTGATTTACCAGAGTTCGAACGTCCTGAAGCCGTTACTTGGTTTACGGACAAAAAAGAAGCATTTATTGGGATGA GTTTTGACGACGCTTTTGCCCAAAGCGATAAGTTTATTAATGAATTAACACCTTTATTGGTTGATGTTAACTTCATCACT TTACCTTCAGAGAAAGGAAATAAGATCACTTGGGATGACATCAATTTTTTCCCATTCCTGCGTAATCTGACGGTAGTAAA AGGATTGGACTTCCCTCCTCATCTAAAAAACTATTTAGAAGAGATCAGTGAGCTTACCGGTGTGAATCTATACTTAGATA TTGCGGTATAG
Upstream 100 bases:
>100_bases AGTAAAAATAAGCTAGCCCAAAATATTCATTCGCTCCCTATTTAATGATTTTGGTTATAGAACCATCGCTTATTTAAACG AGTATTATTGAGGAAATACA
Downstream 100 bases:
>100_bases CATTAATGCTAATCAGTAATTATAGGATCAAAAAAGAGCACATAAAAAGTGCTCTTTTCTTATCATTACGACTACAACCA GCGTTGATACCAAAGAATTT
Product: glutaredoxin 2
Products: NA
Alternate protein names: Grx2 [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKLFIFDHCPFCMKAKMVAGIKNLPVEFTYLQNDDVDTRIEMVGANMVPILEKDDGTYMAESLDIAKYLDENDHYPVIEQ GTCADDISEWLSNVRPLFNKLTFPRWTKFDLPEFERPEAVTWFTDKKEAFIGMSFDDAFAQSDKFINELTPLLVDVNFIT LPSEKGNKITWDDINFFPFLRNLTVVKGLDFPPHLKNYLEEISELTGVNLYLDIAV
Sequences:
>Translated_216_residues MKLFIFDHCPFCMKAKMVAGIKNLPVEFTYLQNDDVDTRIEMVGANMVPILEKDDGTYMAESLDIAKYLDENDHYPVIEQ GTCADDISEWLSNVRPLFNKLTFPRWTKFDLPEFERPEAVTWFTDKKEAFIGMSFDDAFAQSDKFINELTPLLVDVNFIT LPSEKGNKITWDDINFFPFLRNLTVVKGLDFPPHLKNYLEEISELTGVNLYLDIAV >Mature_216_residues MKLFIFDHCPFCMKAKMVAGIKNLPVEFTYLQNDDVDTRIEMVGANMVPILEKDDGTYMAESLDIAKYLDENDHYPVIEQ GTCADDISEWLSNVRPLFNKLTFPRWTKFDLPEFERPEAVTWFTDKKEAFIGMSFDDAFAQSDKFINELTPLLVDVNFIT LPSEKGNKITWDDINFFPFLRNLTVVKGLDFPPHLKNYLEEISELTGVNLYLDIAV
Specific function: Involved in reducing some disulfides in a coupled system with glutathione reductase. Does not act as hydrogen donor for ribonucleotide reductase [H]
COG id: COG2999
COG function: function code O; Glutaredoxin 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787303, Length=217, Percent_Identity=42.8571428571429, Blast_Score=181, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR007494 - InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR011901 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF04399 Glutaredoxin2_C [H]
EC number: NA
Molecular weight: Translated: 24971; Mature: 24971
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFIFDHCPFCMKAKMVAGIKNLPVEFTYLQNDDVDTRIEMVGANMVPILEKDDGTYMA CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCEEH ESLDIAKYLDENDHYPVIEQGTCADDISEWLSNVRPLFNKLTFPRWTKFDLPEFERPEAV HHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE TWFTDKKEAFIGMSFDDAFAQSDKFINELTPLLVDVNFITLPSEKGNKITWDDINFFPFL EEEECCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEEECCCCHHHHH RNLTVVKGLDFPPHLKNYLEEISELTGVNLYLDIAV HCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEC >Mature Secondary Structure MKLFIFDHCPFCMKAKMVAGIKNLPVEFTYLQNDDVDTRIEMVGANMVPILEKDDGTYMA CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCEEH ESLDIAKYLDENDHYPVIEQGTCADDISEWLSNVRPLFNKLTFPRWTKFDLPEFERPEAV HHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE TWFTDKKEAFIGMSFDDAFAQSDKFINELTPLLVDVNFITLPSEKGNKITWDDINFFPFL EEEECCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEEECCCCHHHHH RNLTVVKGLDFPPHLKNYLEEISELTGVNLYLDIAV HCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]