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The map label for this gene is yuxH [H]

Identifier: 209695400

GI number: 209695400

Start: 2072018

End: 2073220

Strand: Reverse

Name: yuxH [H]

Synonym: VSAL_I1937

Alternate gene names: 209695400

Gene position: 2073220-2072018 (Counterclockwise)

Preceding gene: 209695401

Following gene: 209695399

Centisome position: 62.35

GC content: 37.32

Gene sequence:

>1203_bases
ATGTATTCATACGTTGCTCGTCAACCTATTTTAGACCTAAAAAAGAACACGATTGGGTATGAACTCTTATTTAGAGACGG
GCCTAAAAATACATTTCCTGCAGTAGAAGCTGAAGAAGCAACGAGTCGTCTATTATCAGACCATTTTTTGAGTTCCCATT
GCAATGCGACCAATGACAAATTAGGTTTTGTAAACTTTCCACAACAAAGTTTATTAAACTTAGTGCCTACATTATTTAAT
GCTAGCAACCTCGTTATTGAAATTCTTGAAGATTGCATTCCTACCCCCGAATTGCTTGAAGCGATTAAAACGCTATCCGA
ACGAGGGTATAAGCTTGCTTTAGACGATTTTGAGCCAAGCCCTCAATGGACGCCTTTCTTACCTTATATCGACATCATAA
AGTTTGATATGCGTGTAACTCCGGTTCTAAAAGCAAAACTATTTATACGACACTGTGCAAAATACAACATTGTATTTTTG
GCTGAAAAAGTAGAAACATACGAAGAGTTCGAGCAAGCAAAAGAAGCTGGGTTTACGTATTTTCAGGGATATTTCTTTAG
TAAACCTGAAATGTTGCAACAACGTGCGATTCAACCCAATCAACTGTCAATAATACAGTTGTACCAAGAAATATCTGCTC
CTACTGTTAATTTTGTAGCGGTTGAAAAACACATTGCTCAAGATGTTTCGTTATCTTATAAATTGCTGAGATTTGTCAAC
TCATCATCAGTAATAGACAAGCCTATCACGTCATTCAAGCAAGCTTTAGTCTATCTTGGTGAAACCAAATTACGTCAATT
CGTATCTTTGGTTGCTGTCGCTCATGCAACCCAGCATAAGCCTCAATCTCTTTATACATTGTCGATCCATCGCGCTAAAT
TGTGCGAATTGATCGTTAATAAAACAAAAATCAACTTAGAACCAAGCCAAGCCTTTTTAGTCGGTTTATTTTCGTTATTA
GAGCCATTGTTAGATCAACCCTTAGAAGTATTGATCCAACATCTCCCTATTTCAGATGAAATAAAACACGCCCTAACATT
AAGAAAAGGCCCTCTTGGATCTCTTATCCTTGCGATAGAGAGCTACGAAAAAGCCAATTGGGACATTGTCGCTAAATGTT
GTTCTGATCTGCATATCACTGAACAAGAATTCTCAGCTTGTTATAATGAATCCGCTGAATGGGTTGATGATTTAACCCAC
TAA

Upstream 100 bases:

>100_bases
GTTCATTTGGTGCTTAATCATTATTGAGACATGGTTTTTTTGTGTAAATACGATTATCATTAAAACTCATTGATCCAGTA
TGCTGTAGAGAAAATAACTC

Downstream 100 bases:

>100_bases
ACGAGTGTAATAATGTCTAAAAGCAACCATTGCCCTTGTGGCACTAAAAAAAATTATTCAGTTTGTTGTGAACCTATTCA
TAATCAACATGAACTAGCAA

Product: signaling protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MYSYVARQPILDLKKNTIGYELLFRDGPKNTFPAVEAEEATSRLLSDHFLSSHCNATNDKLGFVNFPQQSLLNLVPTLFN
ASNLVIEILEDCIPTPELLEAIKTLSERGYKLALDDFEPSPQWTPFLPYIDIIKFDMRVTPVLKAKLFIRHCAKYNIVFL
AEKVETYEEFEQAKEAGFTYFQGYFFSKPEMLQQRAIQPNQLSIIQLYQEISAPTVNFVAVEKHIAQDVSLSYKLLRFVN
SSSVIDKPITSFKQALVYLGETKLRQFVSLVAVAHATQHKPQSLYTLSIHRAKLCELIVNKTKINLEPSQAFLVGLFSLL
EPLLDQPLEVLIQHLPISDEIKHALTLRKGPLGSLILAIESYEKANWDIVAKCCSDLHITEQEFSACYNESAEWVDDLTH

Sequences:

>Translated_400_residues
MYSYVARQPILDLKKNTIGYELLFRDGPKNTFPAVEAEEATSRLLSDHFLSSHCNATNDKLGFVNFPQQSLLNLVPTLFN
ASNLVIEILEDCIPTPELLEAIKTLSERGYKLALDDFEPSPQWTPFLPYIDIIKFDMRVTPVLKAKLFIRHCAKYNIVFL
AEKVETYEEFEQAKEAGFTYFQGYFFSKPEMLQQRAIQPNQLSIIQLYQEISAPTVNFVAVEKHIAQDVSLSYKLLRFVN
SSSVIDKPITSFKQALVYLGETKLRQFVSLVAVAHATQHKPQSLYTLSIHRAKLCELIVNKTKINLEPSQAFLVGLFSLL
EPLLDQPLEVLIQHLPISDEIKHALTLRKGPLGSLILAIESYEKANWDIVAKCCSDLHITEQEFSACYNESAEWVDDLTH
>Mature_400_residues
MYSYVARQPILDLKKNTIGYELLFRDGPKNTFPAVEAEEATSRLLSDHFLSSHCNATNDKLGFVNFPQQSLLNLVPTLFN
ASNLVIEILEDCIPTPELLEAIKTLSERGYKLALDDFEPSPQWTPFLPYIDIIKFDMRVTPVLKAKLFIRHCAKYNIVFL
AEKVETYEEFEQAKEAGFTYFQGYFFSKPEMLQQRAIQPNQLSIIQLYQEISAPTVNFVAVEKHIAQDVSLSYKLLRFVN
SSSVIDKPITSFKQALVYLGETKLRQFVSLVAVAHATQHKPQSLYTLSIHRAKLCELIVNKTKINLEPSQAFLVGLFSLL
EPLLDQPLEVLIQHLPISDEIKHALTLRKGPLGSLILAIESYEKANWDIVAKCCSDLHITEQEFSACYNESAEWVDDLTH

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 45534; Mature: 45534

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSYVARQPILDLKKNTIGYELLFRDGPKNTFPAVEAEEATSRLLSDHFLSSHCNATNDK
CCCHHHHCCHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
LGFVNFPQQSLLNLVPTLFNASNLVIEILEDCIPTPELLEAIKTLSERGYKLALDDFEPS
CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCC
PQWTPFLPYIDIIKFDMRVTPVLKAKLFIRHCAKYNIVFLAEKVETYEEFEQAKEAGFTY
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCHH
FQGYFFSKPEMLQQRAIQPNQLSIIQLYQEISAPTVNFVAVEKHIAQDVSLSYKLLRFVN
HCCEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHC
SSSVIDKPITSFKQALVYLGETKLRQFVSLVAVAHATQHKPQSLYTLSIHRAKLCELIVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHH
KTKINLEPSQAFLVGLFSLLEPLLDQPLEVLIQHLPISDEIKHALTLRKGPLGSLILAIE
HHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHEEH
SYEKANWDIVAKCCSDLHITEQEFSACYNESAEWVDDLTH
HHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MYSYVARQPILDLKKNTIGYELLFRDGPKNTFPAVEAEEATSRLLSDHFLSSHCNATNDK
CCCHHHHCCHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
LGFVNFPQQSLLNLVPTLFNASNLVIEILEDCIPTPELLEAIKTLSERGYKLALDDFEPS
CCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCC
PQWTPFLPYIDIIKFDMRVTPVLKAKLFIRHCAKYNIVFLAEKVETYEEFEQAKEAGFTY
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCHH
FQGYFFSKPEMLQQRAIQPNQLSIIQLYQEISAPTVNFVAVEKHIAQDVSLSYKLLRFVN
HCCEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHC
SSSVIDKPITSFKQALVYLGETKLRQFVSLVAVAHATQHKPQSLYTLSIHRAKLCELIVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHH
KTKINLEPSQAFLVGLFSLLEPLLDQPLEVLIQHLPISDEIKHALTLRKGPLGSLILAIE
HHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHEEH
SYEKANWDIVAKCCSDLHITEQEFSACYNESAEWVDDLTH
HHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]