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The map label for this gene is ychJ [C]

Identifier: 209695399

GI number: 209695399

Start: 2071607

End: 2072005

Strand: Reverse

Name: ychJ [C]

Synonym: VSAL_I1936

Alternate gene names: 209695399

Gene position: 2072005-2071607 (Counterclockwise)

Preceding gene: 209695400

Following gene: 209695397

Centisome position: 62.31

GC content: 34.84

Gene sequence:

>399_bases
ATGTCTAAAAGCAACCATTGCCCTTGTGGCACTAAAAAAAATTATTCAGTTTGTTGTGAACCTATTCATAATCAACATGA
ACTAGCAAAAACACCCGAACTACTAATGCGTTCACGTTATTCAGCTCATGTTAAACAACTTGTTCAGTACATTATTGATA
CCTACCATCCCTCTTGTCATGCAGAAGAATTTAGAGACGGTATTGTCGAATCCACAGAATTAGAGTGGCGAAAGCTAAAA
GTACTATCAAGTCACTTATCAACAATGAGTCCTTATGAGGGTTTCGTTTCTTTTAAAGCAACATACTCAGAAAACAATCA
ACTTCATCAACTAAAAGAGCACTCTCGTTTTCTTAAAGAAAATGGCAAATGGTATTACATTGATGGTGAAATTGAATAA

Upstream 100 bases:

>100_bases
ATGTTGTTCTGATCTGCATATCACTGAACAAGAATTCTCAGCTTGTTATAATGAATCCGCTGAATGGGTTGATGATTTAA
CCCACTAAACGAGTGTAATA

Downstream 100 bases:

>100_bases
TTTAAGCTCAATAGTTCTTGTTAAAAGATAATAAAGACATAAAAAACGCCGCATTTATTTAAATGCGGCGTTTTTACTTT
TACTTTTTATATTTAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSKSNHCPCGTKKNYSVCCEPIHNQHELAKTPELLMRSRYSAHVKQLVQYIIDTYHPSCHAEEFRDGIVESTELEWRKLK
VLSSHLSTMSPYEGFVSFKATYSENNQLHQLKEHSRFLKENGKWYYIDGEIE

Sequences:

>Translated_132_residues
MSKSNHCPCGTKKNYSVCCEPIHNQHELAKTPELLMRSRYSAHVKQLVQYIIDTYHPSCHAEEFRDGIVESTELEWRKLK
VLSSHLSTMSPYEGFVSFKATYSENNQLHQLKEHSRFLKENGKWYYIDGEIE
>Mature_131_residues
SKSNHCPCGTKKNYSVCCEPIHNQHELAKTPELLMRSRYSAHVKQLVQYIIDTYHPSCHAEEFRDGIVESTELEWRKLKV
LSSHLSTMSPYEGFVSFKATYSENNQLHQLKEHSRFLKENGKWYYIDGEIE

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=127, Percent_Identity=45.6692913385827, Blast_Score=112, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 15497; Mature: 15365

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSNHCPCGTKKNYSVCCEPIHNQHELAKTPELLMRSRYSAHVKQLVQYIIDTYHPSCH
CCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AEEFRDGIVESTELEWRKLKVLSSHLSTMSPYEGFVSFKATYSENNQLHQLKEHSRFLKE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHH
NGKWYYIDGEIE
CCCEEEECCCCC
>Mature Secondary Structure 
SKSNHCPCGTKKNYSVCCEPIHNQHELAKTPELLMRSRYSAHVKQLVQYIIDTYHPSCH
CCCCCCCCCCCCCCHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AEEFRDGIVESTELEWRKLKVLSSHLSTMSPYEGFVSFKATYSENNQLHQLKEHSRFLKE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHH
NGKWYYIDGEIE
CCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]