The gene/protein map for NC_010505 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695388

Identifier: 209695388

GI number: 209695388

Start: 2056403

End: 2058628

Strand: Reverse

Name: 209695388

Synonym: VSAL_I1922

Alternate gene names: NA

Gene position: 2058628-2056403 (Counterclockwise)

Preceding gene: 209695389

Following gene: 209695387

Centisome position: 61.91

GC content: 27.18

Gene sequence:

>2226_bases
ATGTTATCTAAATTATACTATTTACTACTTATAACTTATATTTATATTTCTCCAACTACAGTTGTGAATGCAGCTGCTAC
ATGTGGGTCGTGGAATGACTATCAAAACTGTATTGATGATAGGCCAAGGCCACCTAGTGGCGTCGATCAAGGAACATATT
CAAAAAAAAGAAAAAACATTTTCAAATCAGATATAATAAAACCATTCAATGATTATAAAATTCAATATAAAAAGATGTCA
GATGATAATAATTCTGTCTTAAATAACGATATTAATAATATTGAAAATATTTTCATAAAGCACTTTAATATATTAAACAC
ATGGGCATATAACTATCCTGACAGCTTTAATCTATATTTTAACAATAAAGATATAGATCATGTTATAAATGATGAAATTG
AATTAAATTCTACAGTATTAAATGAACTTATACGTGGTTCTGTTGAGCGAGCTATTCATCGTTATTCAAACTTAAATAAA
ACAGTAATTAATAGTATTCATTTTCACTATTGGGCAAAAGCATATGCTCCATTTATCTCTGGCATTTGGGGCTTTGAATC
AGAATGGTCTTATAGTGATAGAATTGATGAGCATGATAATTATTATATAATTACTGAAAGTACAGAAGATAATTCAGATA
TAAAAGAAATTAAATATACCGATTTGTGGAATAATGCCGCAACAGGACCAACAACAAAATCACAAACGCGTTATATATCT
TTACAACCGAATGAAGATTATATAAATGAAGTAAAAAAATCAATTATAGATAAGGCTCCTCAAAAGATTTCTATTTTAAA
TAATGAAATGAATGAAGTTGATTATATTTCAAAAGTAATAAATTTTGATTATGAAATAATCGCATTATTATCAATTAATT
TCAATTTAGAATTTAAAGATCAAATATTAAAAACAAACAGCTCAGACTTCATAAAAAATAAAAGTAGATTTTTAAATGAA
AATTTATATAAAGAAAAAAATACAGCACTATTATTTACATTCCCATTAATTAATCATTTAATTAACAACAATCAAGACCA
AAATTACATGGAAGAAATAAAATATACATTATTAAAAATACAAGATAACACTTGGTTTTCACAGTTGCCTGATGATAACA
TTTATAAGAAATTGATAAAAAGCATATTAAATGATGATAGTAAAGACACAATTCTAAGACTTTCCACTTCTAACGAATTT
TTAAAGTATCAAATAGATGAAATAGGAATAAACATCACCGATTGGGGGATTAATTTGGACGAAGGTGATATTGTACCATA
TTATAAAAATGATGAAATTCAATTATTTAAATCAAAATTTCATGGAAACGCAGCTAATAATAATTGGTATTTTCCAACAA
ATCATAAATCTAATGAAAGATGGGAATACTTAGGTATATTTATAACTAAAAATAATTATATAAATTATATAAGAAAACTA
AATATTTCATCTGAATGGAATGATTTCACATTCCCTGGTGACATTCATTACTATAATGGTATGTATTTTTCACCAACATT
CATAGGAAAAGCTAATGAAAATAATTATTACTACCCTACAACAAAGGAAAATAACGAACATTGGATATATATAGGTAGCG
ATGATAAACCATCTCCATTTTTTTACCATTACATACAGTATACTTTAAAACATTATGCTAATCGATTGCAATACAATAAC
CTTAGCATTAATAATGCAAGTAATAGTGATATAAATAAAAAAATACGCAATAAATTTCATGAACATTTAAGCGCCTTTTT
TGAGAGTGACTATAATACTAACAAATACCACGCTTTTTCAGCTATCGATCCTTCATTTACAATGATACTACACAACCAAT
ATGATTGGATAATTAAACGACTGACGACTTGGAATGACTGGATGGATGAACATTATCAACATCTTGTAGATATAAATGAT
GGATTCCAGCCAAGTGATGCAGAAATAATGGAGCACTGGATTAATGAGCAATGGGATGCACCTGAAGAATTTAGGGAATG
GTGGTTAGATACCTCATCTTATTTTGAAACTGATTCACCCAGTGAAGTAATAAGGCAGTTAAATATTTTTGAACAAGTGG
AAGAGTTAGATGAAGCATCCGTTGAGTTGACTAATGGGACGATGATAACGTTAATTAACAGTATGAATATTTCAGAAATT
GCTAATGTAGCTACAGCTTCTACTATAACAATATCAACTATTTTACCAATGTTCATTTTCTTATAA

Upstream 100 bases:

>100_bases
TAGCAAGTAATTTAACAAGACCAGGAAGAGTACTCAATAGAAGAGTGGAAATTAAACTTATTAAACTTATTAAACTTATT
AAAAATACTGAGAGGTAATT

Downstream 100 bases:

>100_bases
ATTAGTAAACCGTTATTTAAAAACACATAGAAAATTAAATTTAAGGCTGAGAATTCATCAACTTAGCCTTTTTCCGTAAC
CTATAAATAAAACTATCCAT

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 741; Mature: 741

Protein sequence:

>741_residues
MLSKLYYLLLITYIYISPTTVVNAAATCGSWNDYQNCIDDRPRPPSGVDQGTYSKKRKNIFKSDIIKPFNDYKIQYKKMS
DDNNSVLNNDINNIENIFIKHFNILNTWAYNYPDSFNLYFNNKDIDHVINDEIELNSTVLNELIRGSVERAIHRYSNLNK
TVINSIHFHYWAKAYAPFISGIWGFESEWSYSDRIDEHDNYYIITESTEDNSDIKEIKYTDLWNNAATGPTTKSQTRYIS
LQPNEDYINEVKKSIIDKAPQKISILNNEMNEVDYISKVINFDYEIIALLSINFNLEFKDQILKTNSSDFIKNKSRFLNE
NLYKEKNTALLFTFPLINHLINNNQDQNYMEEIKYTLLKIQDNTWFSQLPDDNIYKKLIKSILNDDSKDTILRLSTSNEF
LKYQIDEIGINITDWGINLDEGDIVPYYKNDEIQLFKSKFHGNAANNNWYFPTNHKSNERWEYLGIFITKNNYINYIRKL
NISSEWNDFTFPGDIHYYNGMYFSPTFIGKANENNYYYPTTKENNEHWIYIGSDDKPSPFFYHYIQYTLKHYANRLQYNN
LSINNASNSDINKKIRNKFHEHLSAFFESDYNTNKYHAFSAIDPSFTMILHNQYDWIIKRLTTWNDWMDEHYQHLVDIND
GFQPSDAEIMEHWINEQWDAPEEFREWWLDTSSYFETDSPSEVIRQLNIFEQVEELDEASVELTNGTMITLINSMNISEI
ANVATASTITISTILPMFIFL

Sequences:

>Translated_741_residues
MLSKLYYLLLITYIYISPTTVVNAAATCGSWNDYQNCIDDRPRPPSGVDQGTYSKKRKNIFKSDIIKPFNDYKIQYKKMS
DDNNSVLNNDINNIENIFIKHFNILNTWAYNYPDSFNLYFNNKDIDHVINDEIELNSTVLNELIRGSVERAIHRYSNLNK
TVINSIHFHYWAKAYAPFISGIWGFESEWSYSDRIDEHDNYYIITESTEDNSDIKEIKYTDLWNNAATGPTTKSQTRYIS
LQPNEDYINEVKKSIIDKAPQKISILNNEMNEVDYISKVINFDYEIIALLSINFNLEFKDQILKTNSSDFIKNKSRFLNE
NLYKEKNTALLFTFPLINHLINNNQDQNYMEEIKYTLLKIQDNTWFSQLPDDNIYKKLIKSILNDDSKDTILRLSTSNEF
LKYQIDEIGINITDWGINLDEGDIVPYYKNDEIQLFKSKFHGNAANNNWYFPTNHKSNERWEYLGIFITKNNYINYIRKL
NISSEWNDFTFPGDIHYYNGMYFSPTFIGKANENNYYYPTTKENNEHWIYIGSDDKPSPFFYHYIQYTLKHYANRLQYNN
LSINNASNSDINKKIRNKFHEHLSAFFESDYNTNKYHAFSAIDPSFTMILHNQYDWIIKRLTTWNDWMDEHYQHLVDIND
GFQPSDAEIMEHWINEQWDAPEEFREWWLDTSSYFETDSPSEVIRQLNIFEQVEELDEASVELTNGTMITLINSMNISEI
ANVATASTITISTILPMFIFL
>Mature_741_residues
MLSKLYYLLLITYIYISPTTVVNAAATCGSWNDYQNCIDDRPRPPSGVDQGTYSKKRKNIFKSDIIKPFNDYKIQYKKMS
DDNNSVLNNDINNIENIFIKHFNILNTWAYNYPDSFNLYFNNKDIDHVINDEIELNSTVLNELIRGSVERAIHRYSNLNK
TVINSIHFHYWAKAYAPFISGIWGFESEWSYSDRIDEHDNYYIITESTEDNSDIKEIKYTDLWNNAATGPTTKSQTRYIS
LQPNEDYINEVKKSIIDKAPQKISILNNEMNEVDYISKVINFDYEIIALLSINFNLEFKDQILKTNSSDFIKNKSRFLNE
NLYKEKNTALLFTFPLINHLINNNQDQNYMEEIKYTLLKIQDNTWFSQLPDDNIYKKLIKSILNDDSKDTILRLSTSNEF
LKYQIDEIGINITDWGINLDEGDIVPYYKNDEIQLFKSKFHGNAANNNWYFPTNHKSNERWEYLGIFITKNNYINYIRKL
NISSEWNDFTFPGDIHYYNGMYFSPTFIGKANENNYYYPTTKENNEHWIYIGSDDKPSPFFYHYIQYTLKHYANRLQYNN
LSINNASNSDINKKIRNKFHEHLSAFFESDYNTNKYHAFSAIDPSFTMILHNQYDWIIKRLTTWNDWMDEHYQHLVDIND
GFQPSDAEIMEHWINEQWDAPEEFREWWLDTSSYFETDSPSEVIRQLNIFEQVEELDEASVELTNGTMITLINSMNISEI
ANVATASTITISTILPMFIFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87704; Mature: 87704

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKLYYLLLITYIYISPTTVVNAAATCGSWNDYQNCIDDRPRPPSGVDQGTYSKKRKNI
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
FKSDIIKPFNDYKIQYKKMSDDNNSVLNNDINNIENIFIKHFNILNTWAYNYPDSFNLYF
HHHHHCCCCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEE
NNKDIDHVINDEIELNSTVLNELIRGSVERAIHRYSNLNKTVINSIHFHYWAKAYAPFIS
CCCCHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GIWGFESEWSYSDRIDEHDNYYIITESTEDNSDIKEIKYTDLWNNAATGPTTKSQTRYIS
HHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHEEEEECCCCCCCCCCCCCCEEEEE
LQPNEDYINEVKKSIIDKAPQKISILNNEMNEVDYISKVINFDYEIIALLSINFNLEFKD
ECCCHHHHHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHHHCCCEEEEEEEEEECCCEEHH
QILKTNSSDFIKNKSRFLNENLYKEKNTALLFTFPLINHLINNNQDQNYMEEIKYTLLKI
HHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHEEEEEE
QDNTWFSQLPDDNIYKKLIKSILNDDSKDTILRLSTSNEFLKYQIDEIGINITDWGINLD
ECCCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHCCEEEEECCCCCC
EGDIVPYYKNDEIQLFKSKFHGNAANNNWYFPTNHKSNERWEYLGIFITKNNYINYIRKL
CCCEECEEECCCHHEEHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEHHEE
NISSEWNDFTFPGDIHYYNGMYFSPTFIGKANENNYYYPTTKENNEHWIYIGSDDKPSPF
CCCCCCCCCCCCCCEEEECCEEECCEEEECCCCCCEECCCCCCCCCEEEEECCCCCCCCH
FYHYIQYTLKHYANRLQYNNLSINNASNSDINKKIRNKFHEHLSAFFESDYNTNKYHAFS
HHHHHHHHHHHHHHHHEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
AIDPSFTMILHNQYDWIIKRLTTWNDWMDEHYQHLVDINDGFQPSDAEIMEHWINEQWDA
ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCC
PEEFREWWLDTSSYFETDSPSEVIRQLNIFEQVEELDEASVELTNGTMITLINSMNISEI
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEEECCCHHHH
ANVATASTITISTILPMFIFL
HHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLSKLYYLLLITYIYISPTTVVNAAATCGSWNDYQNCIDDRPRPPSGVDQGTYSKKRKNI
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
FKSDIIKPFNDYKIQYKKMSDDNNSVLNNDINNIENIFIKHFNILNTWAYNYPDSFNLYF
HHHHHCCCCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEE
NNKDIDHVINDEIELNSTVLNELIRGSVERAIHRYSNLNKTVINSIHFHYWAKAYAPFIS
CCCCHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GIWGFESEWSYSDRIDEHDNYYIITESTEDNSDIKEIKYTDLWNNAATGPTTKSQTRYIS
HHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHEEEEECCCCCCCCCCCCCCEEEEE
LQPNEDYINEVKKSIIDKAPQKISILNNEMNEVDYISKVINFDYEIIALLSINFNLEFKD
ECCCHHHHHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHHHCCCEEEEEEEEEECCCEEHH
QILKTNSSDFIKNKSRFLNENLYKEKNTALLFTFPLINHLINNNQDQNYMEEIKYTLLKI
HHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHEEEEEE
QDNTWFSQLPDDNIYKKLIKSILNDDSKDTILRLSTSNEFLKYQIDEIGINITDWGINLD
ECCCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHCCEEEEECCCCCC
EGDIVPYYKNDEIQLFKSKFHGNAANNNWYFPTNHKSNERWEYLGIFITKNNYINYIRKL
CCCEECEEECCCHHEEHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEHHEE
NISSEWNDFTFPGDIHYYNGMYFSPTFIGKANENNYYYPTTKENNEHWIYIGSDDKPSPF
CCCCCCCCCCCCCCEEEECCEEECCEEEECCCCCCEECCCCCCCCCEEEEECCCCCCCCH
FYHYIQYTLKHYANRLQYNNLSINNASNSDINKKIRNKFHEHLSAFFESDYNTNKYHAFS
HHHHHHHHHHHHHHHHEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
AIDPSFTMILHNQYDWIIKRLTTWNDWMDEHYQHLVDINDGFQPSDAEIMEHWINEQWDA
ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCC
PEEFREWWLDTSSYFETDSPSEVIRQLNIFEQVEELDEASVELTNGTMITLINSMNISEI
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEEECCCHHHH
ANVATASTITISTILPMFIFL
HHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA