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The map label for this gene is 209695281

Identifier: 209695281

GI number: 209695281

Start: 1928797

End: 1930368

Strand: Reverse

Name: 209695281

Synonym: VSAL_I1806

Alternate gene names: NA

Gene position: 1930368-1928797 (Counterclockwise)

Preceding gene: 209695286

Following gene: 209695280

Centisome position: 58.05

GC content: 40.52

Gene sequence:

>1572_bases
ATGAACGCCACCCCTTACCGTTTGCGACTCATTTTAGGTGACCAATTAAATGCCAGTCACTCTTGGTTTAGCCAAACCGA
TCCACAAACACTCTACGTCATTGCTGAAATGCATCAAGAGGCTGTCTACGTAAAACACCATGTTCAAAAGGTGTGCGCTT
TTTTTGCTGCAATGGCGCAATTTGCAACAGCGTTAGAAAGCGCGGGGCATCGGGTAATACAGTTAACCTTAGATGATACT
GAGCGATTTGAAAAAATAGACGATCTATTAAATTATCTTATTACTGAGCATCAAATTACTCACTTTGAATACCAACTCCC
TGATGAATATCGTTTACGTAACATGTTCGATAAATATTGCTTGTCGCTATCGATATCTTCTCAAGTTTATGAAAGCGAGC
ACTTCTTTCTCTCTGAAGCGCAAATTGAAAAAGAGTTTAAGCCGAACCATCATCATCGCATGGAACCCTTTTACCGTAAG
ATGAGAAAGCGCTTTAATATACTGATGGAAGAGGGGGAGCCCGTTGCAGGGAAGTGGAACTTTGACAATGCAAATCAAAA
TAAATTAAAGCGTACTGAATTTGATAGCGTGCCAACGCCCTTATTATTTGCTAACGATGTCTCTGATATTATTGAGCGTT
TAGATCGTCATAATATTGAGACGATAGGCCAAGCAGATAAGCAATTATTGTGGCCAGTGAATCGGCAGAAAGCGAGTGAA
TTGTTGGTGTTTTTCTGTCGTTATTGCTTGCCATTGTTTGGTCAGTTTCAAGATGCGATGACGTGCAAGCTTGATGATAT
GCTCACTCAAAAGCAATGGAGTTTGTTTCACAGCCGTTTATCCTTCGCATTAAACGCAAAAATACTCAGCCCTAAGCAAG
TAATAGATGCCGCCATTATGGAGTTTAACCAACGACCTGATGATATTAATATTGCACAGATAGAAGGCTTTGTGCGTCAG
ATATTAGGGTGGAGGGAGTTTGTACGTGGGATCTACTGGCGAAATATGCCAACCTATCAGAGTTTGAATAAACTCAACGC
TTCATTGTCATTGCCAAGTTGGTTTTGGACGGGTAATACAAAAATGAATTGTATGCACCATGCGATTAAACAATCACTTG
ATTTTGCCTATGCACACCATATTCAACGGTTAATGATTACCGGTAATTTTTGTTTATTAACGGGCATTAAGCCTGACGAA
GTAGATGAGTGGTATTTAGGCATTTATATTGATGCGATTGAATGGGTAGAAATGCCAAATACGCGTGGAATGAGCCAATT
TGCAGATGGTGGCATTGTTGCTTCTAAGGCTTACGCAGCCAGTGGAAACTACGTGAATAAAATGAGCGACTATTGCCCCG
ATTGTCACTATAACGTAAAGCAGGTGAGTGAAGAGACAGCGTGCCCATTAAATGCGCTGTATTGGCACTTTATGCATACA
CACATTGAGCAGTTTACTAATAATCCACGTACCAGAATGGTCTATGCGAATTGGAAGAAAAAATCAGCAGAGCAACAACA
AGCTATTTTAGATAAAGCGAAACTGTTGTTATTGGATATTGAGGGGCTGTAG

Upstream 100 bases:

>100_bases
GATTGGCCTATGGTTAAATATTGCTCCAAACGTTGTCAGTCTTTACGGCATCAACGTGAATAATAAATCTACAAACGAAG
ATTTAAGATAGAGGATGATT

Downstream 100 bases:

>100_bases
GCTTTTTTGAATAAAACTTTGAGTAATGTGACTTGTTTTTGTCTCGAAGTTTGTTTAAGCATATTCGCTTTAACAACCGT
TTAGCTGATTTTGCTATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MNATPYRLRLILGDQLNASHSWFSQTDPQTLYVIAEMHQEAVYVKHHVQKVCAFFAAMAQFATALESAGHRVIQLTLDDT
ERFEKIDDLLNYLITEHQITHFEYQLPDEYRLRNMFDKYCLSLSISSQVYESEHFFLSEAQIEKEFKPNHHHRMEPFYRK
MRKRFNILMEEGEPVAGKWNFDNANQNKLKRTEFDSVPTPLLFANDVSDIIERLDRHNIETIGQADKQLLWPVNRQKASE
LLVFFCRYCLPLFGQFQDAMTCKLDDMLTQKQWSLFHSRLSFALNAKILSPKQVIDAAIMEFNQRPDDINIAQIEGFVRQ
ILGWREFVRGIYWRNMPTYQSLNKLNASLSLPSWFWTGNTKMNCMHHAIKQSLDFAYAHHIQRLMITGNFCLLTGIKPDE
VDEWYLGIYIDAIEWVEMPNTRGMSQFADGGIVASKAYAASGNYVNKMSDYCPDCHYNVKQVSEETACPLNALYWHFMHT
HIEQFTNNPRTRMVYANWKKKSAEQQQAILDKAKLLLLDIEGL

Sequences:

>Translated_523_residues
MNATPYRLRLILGDQLNASHSWFSQTDPQTLYVIAEMHQEAVYVKHHVQKVCAFFAAMAQFATALESAGHRVIQLTLDDT
ERFEKIDDLLNYLITEHQITHFEYQLPDEYRLRNMFDKYCLSLSISSQVYESEHFFLSEAQIEKEFKPNHHHRMEPFYRK
MRKRFNILMEEGEPVAGKWNFDNANQNKLKRTEFDSVPTPLLFANDVSDIIERLDRHNIETIGQADKQLLWPVNRQKASE
LLVFFCRYCLPLFGQFQDAMTCKLDDMLTQKQWSLFHSRLSFALNAKILSPKQVIDAAIMEFNQRPDDINIAQIEGFVRQ
ILGWREFVRGIYWRNMPTYQSLNKLNASLSLPSWFWTGNTKMNCMHHAIKQSLDFAYAHHIQRLMITGNFCLLTGIKPDE
VDEWYLGIYIDAIEWVEMPNTRGMSQFADGGIVASKAYAASGNYVNKMSDYCPDCHYNVKQVSEETACPLNALYWHFMHT
HIEQFTNNPRTRMVYANWKKKSAEQQQAILDKAKLLLLDIEGL
>Mature_523_residues
MNATPYRLRLILGDQLNASHSWFSQTDPQTLYVIAEMHQEAVYVKHHVQKVCAFFAAMAQFATALESAGHRVIQLTLDDT
ERFEKIDDLLNYLITEHQITHFEYQLPDEYRLRNMFDKYCLSLSISSQVYESEHFFLSEAQIEKEFKPNHHHRMEPFYRK
MRKRFNILMEEGEPVAGKWNFDNANQNKLKRTEFDSVPTPLLFANDVSDIIERLDRHNIETIGQADKQLLWPVNRQKASE
LLVFFCRYCLPLFGQFQDAMTCKLDDMLTQKQWSLFHSRLSFALNAKILSPKQVIDAAIMEFNQRPDDINIAQIEGFVRQ
ILGWREFVRGIYWRNMPTYQSLNKLNASLSLPSWFWTGNTKMNCMHHAIKQSLDFAYAHHIQRLMITGNFCLLTGIKPDE
VDEWYLGIYIDAIEWVEMPNTRGMSQFADGGIVASKAYAASGNYVNKMSDYCPDCHYNVKQVSEETACPLNALYWHFMHT
HIEQFTNNPRTRMVYANWKKKSAEQQQAILDKAKLLLLDIEGL

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61224; Mature: 61224

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATPYRLRLILGDQLNASHSWFSQTDPQTLYVIAEMHQEAVYVKHHVQKVCAFFAAMAQ
CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
FATALESAGHRVIQLTLDDTERFEKIDDLLNYLITEHQITHFEYQLPDEYRLRNMFDKYC
HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHH
LSLSISSQVYESEHFFLSEAQIEKEFKPNHHHRMEPFYRKMRKRFNILMEEGEPVAGKWN
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
FDNANQNKLKRTEFDSVPTPLLFANDVSDIIERLDRHNIETIGQADKQLLWPVNRQKASE
CCCCCCHHCHHCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHCCCHHHCCCCCHHHHHH
LLVFFCRYCLPLFGQFQDAMTCKLDDMLTQKQWSLFHSRLSFALNAKILSPKQVIDAAIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHH
EFNQRPDDINIAQIEGFVRQILGWREFVRGIYWRNMPTYQSLNKLNASLSLPSWFWTGNT
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEECCC
KMNCMHHAIKQSLDFAYAHHIQRLMITGNFCLLTGIKPDEVDEWYLGIYIDAIEWVEMPN
CHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCCCEEEEEEEEHHHHHCCCC
TRGMSQFADGGIVASKAYAASGNYVNKMSDYCPDCHYNVKQVSEETACPLNALYWHFMHT
CCCHHHHCCCCEEEECCEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
HIEQFTNNPRTRMVYANWKKKSAEQQQAILDKAKLLLLDIEGL
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHEEEEEECCC
>Mature Secondary Structure
MNATPYRLRLILGDQLNASHSWFSQTDPQTLYVIAEMHQEAVYVKHHVQKVCAFFAAMAQ
CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
FATALESAGHRVIQLTLDDTERFEKIDDLLNYLITEHQITHFEYQLPDEYRLRNMFDKYC
HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHH
LSLSISSQVYESEHFFLSEAQIEKEFKPNHHHRMEPFYRKMRKRFNILMEEGEPVAGKWN
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
FDNANQNKLKRTEFDSVPTPLLFANDVSDIIERLDRHNIETIGQADKQLLWPVNRQKASE
CCCCCCHHCHHCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHCCCHHHCCCCCHHHHHH
LLVFFCRYCLPLFGQFQDAMTCKLDDMLTQKQWSLFHSRLSFALNAKILSPKQVIDAAIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHH
EFNQRPDDINIAQIEGFVRQILGWREFVRGIYWRNMPTYQSLNKLNASLSLPSWFWTGNT
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEECCC
KMNCMHHAIKQSLDFAYAHHIQRLMITGNFCLLTGIKPDEVDEWYLGIYIDAIEWVEMPN
CHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCCCEEEEEEEEHHHHHCCCC
TRGMSQFADGGIVASKAYAASGNYVNKMSDYCPDCHYNVKQVSEETACPLNALYWHFMHT
CCCHHHHCCCCEEEECCEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
HIEQFTNNPRTRMVYANWKKKSAEQQQAILDKAKLLLLDIEGL
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA