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The map label for this gene is yegD [H]

Identifier: 209695243

GI number: 209695243

Start: 1876072

End: 1877424

Strand: Reverse

Name: yegD [H]

Synonym: VSAL_I1764

Alternate gene names: 209695243

Gene position: 1877424-1876072 (Counterclockwise)

Preceding gene: 209695244

Following gene: 209695242

Centisome position: 56.46

GC content: 38.51

Gene sequence:

>1353_bases
ATGTTTATTGGATTTGACTACGGAACGGCAAATTGCTCAGTGGCAACCATTCAAAATAATCAAGCTAAACTGCTTAAACT
AGAAGGGGATAGTACTTTTATACCTTCCGCGTTATGCGCACCTACTCGAGAAGCTGTTTCTGAATATCTATTTCGTATTT
GGGGTGTTCAACCAAGTACGAATATTAATGAACGTTTACTTCATACGGCTATTGCTTATAACCGTGAAGAGGATATTGAT
GTTGATGCTGGATCTGTGACGTTTGGTCAAGCGGCTTTAAATGTTTATATTGATGATCCAGAAGACGTATATTACGTAAA
GTCACCTAAATCTTTCTTAGGTGTTTCTGGTTTACGTGATGTACAAGTTAGCTTGTTTGAAGATCTTGTAACTGCCATGA
TGAAAAACATCAAAAATAATGCAGAGCAAGAATTACAGGCTGATATTACATCTACCGTTATTGGGCGTCCTGTTAACTTC
CAAGGGGCAGAAAGTGATGAGGCAAACAGCCAAGCCATCTCTATTTTGTCACGTGCAGCGATGCGTGTTGGTTTTAAAAA
TATTGAATTTCAATTTGAACCAGTGGCCGCGGGTCTAGACTATGAGCAAACATTAACTGAAGACAAAACGGTTCTTATTG
TTGATATTGGCGGTGGTACGACTGATTGCTCGATGATCGAGATGGGACCATCTTGGAAAGGTAATCATGACCGCACAAAA
GGGATCTTAGCTCACAGTGGGTCTCGTATTGGTGGTAATGATTTAGATATTCATTTAGCACACCGTAAATTTATGCCAAT
GCTGGGATCTCAAAGTCGAACTCATAAAGGCTTAGAGTTACCAATGACTCAATTTTGGAATCCAATTGCTATTAATAATA
TTGTGGCACAATTGGATTTCTTTGGTTTTGCTAACCGTAAACATTTATTGCAAATGATGAATGAGACACAAGAGCCAGAA
AAATTAGCTCGATTGATTAAACTGTACGATGAAAAATTAAGTTATAAATTACTTCGTGACGCTGAACAAACAAAAATTGC
GCTATCAGAGCATTTAGAGCATTCGGTTGATCTCAGCTATCTTGATGAAGGCTTATCATTATCTATTGATCAACAAAGTC
TTACTGAGGCAATTGCGAAACCGCAAGAGAACATCAATAGACTTGTTAAAGAAGCCATTCAGCAAGCAGGTAAAACGCCA
GATATTATTTATGTCACCGGTGGTTCTGCTCGTTCACCAATTTTACAAGCAGCATTGCAGAAACAATTACCAAATATTGA
AATTGTAGGTGGTAATTACTTTGGTTCAGTGACAGCGGGCTTAGCTCACTGGGCAAATTACTGCTTCGCATAA

Upstream 100 bases:

>100_bases
AGATCATGTCGGAATTGCAGCATCTTTTTCATTTTGATTGGCAAATGGGTAGCAAGCGAGTAAAATCACCTCCCTTTTAT
TCGATGCTAGGTGTACAACA

Downstream 100 bases:

>100_bases
ATTCAGTGATTCACAATAAATTCGAGTATCAAGCGGCTGATAACGTCGCTTGGTTTTGTGAAATATTAAATAAATTTTAG
GTAAAATTAAATGACAAACA

Product: chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MFIGFDYGTANCSVATIQNNQAKLLKLEGDSTFIPSALCAPTREAVSEYLFRIWGVQPSTNINERLLHTAIAYNREEDID
VDAGSVTFGQAALNVYIDDPEDVYYVKSPKSFLGVSGLRDVQVSLFEDLVTAMMKNIKNNAEQELQADITSTVIGRPVNF
QGAESDEANSQAISILSRAAMRVGFKNIEFQFEPVAAGLDYEQTLTEDKTVLIVDIGGGTTDCSMIEMGPSWKGNHDRTK
GILAHSGSRIGGNDLDIHLAHRKFMPMLGSQSRTHKGLELPMTQFWNPIAINNIVAQLDFFGFANRKHLLQMMNETQEPE
KLARLIKLYDEKLSYKLLRDAEQTKIALSEHLEHSVDLSYLDEGLSLSIDQQSLTEAIAKPQENINRLVKEAIQQAGKTP
DIIYVTGGSARSPILQAALQKQLPNIEIVGGNYFGSVTAGLAHWANYCFA

Sequences:

>Translated_450_residues
MFIGFDYGTANCSVATIQNNQAKLLKLEGDSTFIPSALCAPTREAVSEYLFRIWGVQPSTNINERLLHTAIAYNREEDID
VDAGSVTFGQAALNVYIDDPEDVYYVKSPKSFLGVSGLRDVQVSLFEDLVTAMMKNIKNNAEQELQADITSTVIGRPVNF
QGAESDEANSQAISILSRAAMRVGFKNIEFQFEPVAAGLDYEQTLTEDKTVLIVDIGGGTTDCSMIEMGPSWKGNHDRTK
GILAHSGSRIGGNDLDIHLAHRKFMPMLGSQSRTHKGLELPMTQFWNPIAINNIVAQLDFFGFANRKHLLQMMNETQEPE
KLARLIKLYDEKLSYKLLRDAEQTKIALSEHLEHSVDLSYLDEGLSLSIDQQSLTEAIAKPQENINRLVKEAIQQAGKTP
DIIYVTGGSARSPILQAALQKQLPNIEIVGGNYFGSVTAGLAHWANYCFA
>Mature_450_residues
MFIGFDYGTANCSVATIQNNQAKLLKLEGDSTFIPSALCAPTREAVSEYLFRIWGVQPSTNINERLLHTAIAYNREEDID
VDAGSVTFGQAALNVYIDDPEDVYYVKSPKSFLGVSGLRDVQVSLFEDLVTAMMKNIKNNAEQELQADITSTVIGRPVNF
QGAESDEANSQAISILSRAAMRVGFKNIEFQFEPVAAGLDYEQTLTEDKTVLIVDIGGGTTDCSMIEMGPSWKGNHDRTK
GILAHSGSRIGGNDLDIHLAHRKFMPMLGSQSRTHKGLELPMTQFWNPIAINNIVAQLDFFGFANRKHLLQMMNETQEPE
KLARLIKLYDEKLSYKLLRDAEQTKIALSEHLEHSVDLSYLDEGLSLSIDQQSLTEAIAKPQENINRLVKEAIQQAGKTP
DIIYVTGGSARSPILQAALQKQLPNIEIVGGNYFGSVTAGLAHWANYCFA

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Escherichia coli, GI87082035, Length=449, Percent_Identity=55.6792873051225, Blast_Score=514, Evalue=1e-147,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 49712; Mature: 49712

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00329 HSP70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIGFDYGTANCSVATIQNNQAKLLKLEGDSTFIPSALCAPTREAVSEYLFRIWGVQPST
CEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCC
NINERLLHTAIAYNREEDIDVDAGSVTFGQAALNVYIDDPEDVYYVKSPKSFLGVSGLRD
CHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEEEEECCCCCEEEEECCHHHHCCCCCHH
VQVSLFEDLVTAMMKNIKNNAEQELQADITSTVIGRPVNFQGAESDEANSQAISILSRAA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
MRVGFKNIEFQFEPVAAGLDYEQTLTEDKTVLIVDIGGGTTDCSMIEMGPSWKGNHDRTK
HHHCCCCCEEEEEEEECCCCHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHC
GILAHSGSRIGGNDLDIHLAHRKFMPMLGSQSRTHKGLELPMTQFWNPIAINNIVAQLDF
CHHEECCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH
FGFANRKHLLQMMNETQEPEKLARLIKLYDEKLSYKLLRDAEQTKIALSEHLEHSVDLSY
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHH
LDEGLSLSIDQQSLTEAIAKPQENINRLVKEAIQQAGKTPDIIYVTGGSARSPILQAALQ
HCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
KQLPNIEIVGGNYFGSVTAGLAHWANYCFA
HHCCCEEEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFIGFDYGTANCSVATIQNNQAKLLKLEGDSTFIPSALCAPTREAVSEYLFRIWGVQPST
CEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCC
NINERLLHTAIAYNREEDIDVDAGSVTFGQAALNVYIDDPEDVYYVKSPKSFLGVSGLRD
CHHHHHHHHHHHCCCCCCCCCCCCCEEECCEEEEEEECCCCCEEEEECCHHHHCCCCCHH
VQVSLFEDLVTAMMKNIKNNAEQELQADITSTVIGRPVNFQGAESDEANSQAISILSRAA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
MRVGFKNIEFQFEPVAAGLDYEQTLTEDKTVLIVDIGGGTTDCSMIEMGPSWKGNHDRTK
HHHCCCCCEEEEEEEECCCCHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHC
GILAHSGSRIGGNDLDIHLAHRKFMPMLGSQSRTHKGLELPMTQFWNPIAINNIVAQLDF
CHHEECCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH
FGFANRKHLLQMMNETQEPEKLARLIKLYDEKLSYKLLRDAEQTKIALSEHLEHSVDLSY
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHH
LDEGLSLSIDQQSLTEAIAKPQENINRLVKEAIQQAGKTPDIIYVTGGSARSPILQAALQ
HCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
KQLPNIEIVGGNYFGSVTAGLAHWANYCFA
HHCCCEEEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]