Click here to switch to the map view.

The map label for this gene is yqfB [C]

Identifier: 209695242

GI number: 209695242

Start: 1875664

End: 1875981

Strand: Reverse

Name: yqfB [C]

Synonym: VSAL_I1763

Alternate gene names: 209695242

Gene position: 1875981-1875664 (Counterclockwise)

Preceding gene: 209695243

Following gene: 209695241

Centisome position: 56.42

GC content: 33.96

Gene sequence:

>318_bases
ATGACAAACATACCAACAACGATGACTTTTTTTGAGCGTTTTGAATCAGATATTATGTCGGGAAAAAAAGTAATTACGAT
TCGAGATGAATCAGAAGAAGATTATGCGGTAGGTTCTGAGGTTTCAGTCAGCACGTATGAAGACAATCGTCATTTTTGTC
GTTTAGCAATTGATAGCGTTACGCCCATTACGTTTGATGAATTAAACCAATATCATGCAGATCAAGAAAACATGACATTA
GATGAGTTAAAACAAATTATCGAAGAGATTTACGCAAACAAAGGTCAACTTTACGTAGTTTCTTACCATTTAGTTTAA

Upstream 100 bases:

>100_bases
CTTCGCATAAATTCAGTGATTCACAATAAATTCGAGTATCAAGCGGCTGATAACGTCGCTTGGTTTTGTGAAATATTAAA
TAAATTTTAGGTAAAATTAA

Downstream 100 bases:

>100_bases
CGATTACTTAATATAGGATAAATAATGGAACTGTTATCCATTGATTTTCTTGGACAGCCATTGCGTTTAGAAGGCTCAAT
GGCTGGCTGGCAGCAAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTNIPTTMTFFERFESDIMSGKKVITIRDESEEDYAVGSEVSVSTYEDNRHFCRLAIDSVTPITFDELNQYHADQENMTL
DELKQIIEEIYANKGQLYVVSYHLV

Sequences:

>Translated_105_residues
MTNIPTTMTFFERFESDIMSGKKVITIRDESEEDYAVGSEVSVSTYEDNRHFCRLAIDSVTPITFDELNQYHADQENMTL
DELKQIIEEIYANKGQLYVVSYHLV
>Mature_104_residues
TNIPTTMTFFERFESDIMSGKKVITIRDESEEDYAVGSEVSVSTYEDNRHFCRLAIDSVTPITFDELNQYHADQENMTLD
ELKQIIEEIYANKGQLYVVSYHLV

Specific function: Unknown

COG id: COG3097

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0267 family [H]

Homologues:

Organism=Escherichia coli, GI1789267, Length=101, Percent_Identity=43.5643564356436, Blast_Score=104, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007374
- InterPro:   IPR015947
- InterPro:   IPR008314 [H]

Pfam domain/function: PF04266 ASCH [H]

EC number: NA

Molecular weight: Translated: 12210; Mature: 12079

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNIPTTMTFFERFESDIMSGKKVITIRDESEEDYAVGSEVSVSTYEDNRHFCRLAIDSV
CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCC
TPITFDELNQYHADQENMTLDELKQIIEEIYANKGQLYVVSYHLV
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEC
>Mature Secondary Structure 
TNIPTTMTFFERFESDIMSGKKVITIRDESEEDYAVGSEVSVSTYEDNRHFCRLAIDSV
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCC
TPITFDELNQYHADQENMTLDELKQIIEEIYANKGQLYVVSYHLV
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA