Click here to switch to the map view.

The map label for this gene is 209695241

Identifier: 209695241

GI number: 209695241

Start: 1874557

End: 1875639

Strand: Reverse

Name: 209695241

Synonym: VSAL_I1762

Alternate gene names: NA

Gene position: 1875639-1874557 (Counterclockwise)

Preceding gene: 209695242

Following gene: 209695240

Centisome position: 56.41

GC content: 39.24

Gene sequence:

>1083_bases
ATGGAACTGTTATCCATTGATTTTCTTGGACAGCCATTGCGTTTAGAAGGCTCAATGGCTGGCTGGCAGCAAGTGTTTTG
GAGTAATACATTAGTTGCTCAACAGGCGGCATCCGCGGATCATCAAGATCTATTTATACACGAATTTAAATTGAATCAAG
GTGAGACGATAGTAACGTGTCGTTTAGAAGTGAAAGTTACTTGGCAACCATTTTTGATCGAGTATCGTGCAAGTGTTGAT
GACCAGTTGATCGCAGAAGGCTCTCGTAATACAAAAGACATTGAGCAACAAGTTCCACATGAGCCAATAAAAGCAGAGCG
CCGGTTTAGTTTGATCGGTCTTGTGTCACTAGGCATGAAAGCATTAAAAAGCGTTAAACTGGTTAAAGTTGTATTAGCGT
CAGCCAGTATCGCGGCTTACTCATGGTTATTTTCTATTGAATTTGCATTATCACTGATAGCTTGCCTAGTGTTTCATGAA
TACGGTCATATTCGTGCGATGAAATACTTTGGAATGAAGACGAAAGGGATTTATTTGATCCCATTTTTAGGCGGATTAGC
ACTCAGTGATGAGAAAATAAATACACGTTGGCAAGATGTTGTTATTTCGATTATGGGGCCATTTTTTGGTTTGATACTGT
CGCTGATTTTAATTGTCGTGTATTGGATAACAGGAGAGATGTTCTTTGCGGGTCTTGCTGTATTTAATGCATTCTTAAAC
CTCTTTAATTTACTGCCCATTTTGCCCTTAGACGGTGGACACGTATTAAAAAGTGTTAGCTTCTCTATGAACAGTAAAGT
TGGTATTGCATTGTGTGCTTTAGCCGCCATTGGTGGGATAATATTAAGTTACCAATTAGGCTTCGCTCTTTTTGGTTTCC
TACTTATTATGGGGAGCTTAGAAATCGTCTTTGAGTGGAAGCAACGTCATCATAGTCATTTGTTGCCTTTAGATAAATAT
GGACAAATTGTTTCATCGGCTTGGTATGTCGGGCTTGTAAGCTCGTTAGTTGGTATTATTTGGTATTTTGCAAGTAGCGG
AGATGCTTTATTACAACTGCCAATGCAGATTTTAGGAACGTAA

Upstream 100 bases:

>100_bases
TGAGTTAAAACAAATTATCGAAGAGATTTACGCAAACAAAGGTCAACTTTACGTAGTTTCTTACCATTTAGTTTAACGAT
TACTTAATATAGGATAAATA

Downstream 100 bases:

>100_bases
TAGTAAGAAGCCTATTTTAGAATATAAATGAGAAGCTCAAGAAGGGCGCACAGAAAGGATAAAAGGATGTTTAAGAAATT
AAAGGCGTCATTAGGTATAG

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MELLSIDFLGQPLRLEGSMAGWQQVFWSNTLVAQQAASADHQDLFIHEFKLNQGETIVTCRLEVKVTWQPFLIEYRASVD
DQLIAEGSRNTKDIEQQVPHEPIKAERRFSLIGLVSLGMKALKSVKLVKVVLASASIAAYSWLFSIEFALSLIACLVFHE
YGHIRAMKYFGMKTKGIYLIPFLGGLALSDEKINTRWQDVVISIMGPFFGLILSLILIVVYWITGEMFFAGLAVFNAFLN
LFNLLPILPLDGGHVLKSVSFSMNSKVGIALCALAAIGGIILSYQLGFALFGFLLIMGSLEIVFEWKQRHHSHLLPLDKY
GQIVSSAWYVGLVSSLVGIIWYFASSGDALLQLPMQILGT

Sequences:

>Translated_360_residues
MELLSIDFLGQPLRLEGSMAGWQQVFWSNTLVAQQAASADHQDLFIHEFKLNQGETIVTCRLEVKVTWQPFLIEYRASVD
DQLIAEGSRNTKDIEQQVPHEPIKAERRFSLIGLVSLGMKALKSVKLVKVVLASASIAAYSWLFSIEFALSLIACLVFHE
YGHIRAMKYFGMKTKGIYLIPFLGGLALSDEKINTRWQDVVISIMGPFFGLILSLILIVVYWITGEMFFAGLAVFNAFLN
LFNLLPILPLDGGHVLKSVSFSMNSKVGIALCALAAIGGIILSYQLGFALFGFLLIMGSLEIVFEWKQRHHSHLLPLDKY
GQIVSSAWYVGLVSSLVGIIWYFASSGDALLQLPMQILGT
>Mature_360_residues
MELLSIDFLGQPLRLEGSMAGWQQVFWSNTLVAQQAASADHQDLFIHEFKLNQGETIVTCRLEVKVTWQPFLIEYRASVD
DQLIAEGSRNTKDIEQQVPHEPIKAERRFSLIGLVSLGMKALKSVKLVKVVLASASIAAYSWLFSIEFALSLIACLVFHE
YGHIRAMKYFGMKTKGIYLIPFLGGLALSDEKINTRWQDVVISIMGPFFGLILSLILIVVYWITGEMFFAGLAVFNAFLN
LFNLLPILPLDGGHVLKSVSFSMNSKVGIALCALAAIGGIILSYQLGFALFGFLLIMGSLEIVFEWKQRHHSHLLPLDKY
GQIVSSAWYVGLVSSLVGIIWYFASSGDALLQLPMQILGT

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 40041; Mature: 40041

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLSIDFLGQPLRLEGSMAGWQQVFWSNTLVAQQAASADHQDLFIHEFKLNQGETIVTC
CCEEEEECCCCCCEECCCHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEE
RLEVKVTWQPFLIEYRASVDDQLIAEGSRNTKDIEQQVPHEPIKAERRFSLIGLVSLGMK
EEEEEEEECCEEHEECCCCCHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ALKSVKLVKVVLASASIAAYSWLFSIEFALSLIACLVFHEYGHIRAMKYFGMKTKGIYLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCEEEE
PFLGGLALSDEKINTRWQDVVISIMGPFFGLILSLILIVVYWITGEMFFAGLAVFNAFLN
EECCCEEECCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFNLLPILPLDGGHVLKSVSFSMNSKVGIALCALAAIGGIILSYQLGFALFGFLLIMGSL
HHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EIVFEWKQRHHSHLLPLDKYGQIVSSAWYVGLVSSLVGIIWYFASSGDALLQLPMQILGT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MELLSIDFLGQPLRLEGSMAGWQQVFWSNTLVAQQAASADHQDLFIHEFKLNQGETIVTC
CCEEEEECCCCCCEECCCHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEEE
RLEVKVTWQPFLIEYRASVDDQLIAEGSRNTKDIEQQVPHEPIKAERRFSLIGLVSLGMK
EEEEEEEECCEEHEECCCCCHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ALKSVKLVKVVLASASIAAYSWLFSIEFALSLIACLVFHEYGHIRAMKYFGMKTKGIYLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCEEEE
PFLGGLALSDEKINTRWQDVVISIMGPFFGLILSLILIVVYWITGEMFFAGLAVFNAFLN
EECCCEEECCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFNLLPILPLDGGHVLKSVSFSMNSKVGIALCALAAIGGIILSYQLGFALFGFLLIMGSL
HHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EIVFEWKQRHHSHLLPLDKYGQIVSSAWYVGLVSSLVGIIWYFASSGDALLQLPMQILGT
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]