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The map label for this gene is yceB [H]

Identifier: 209695062

GI number: 209695062

Start: 1670230

End: 1670781

Strand: Reverse

Name: yceB [H]

Synonym: VSAL_I1559

Alternate gene names: 209695062

Gene position: 1670781-1670230 (Counterclockwise)

Preceding gene: 209695063

Following gene: 209695060

Centisome position: 50.25

GC content: 33.88

Gene sequence:

>552_bases
ATGAAAAATTTAAAGTTATTATTTTCTTTCCTGTTTGTACTCTCTTTATCTGGCTGTACTAGTTATTCGATTACAGAACA
AGAAATGACAGATTATCTAACTGATGAAATTAATGTCGATAAGTCTGTAGGTATTCCAGGCTTATTATACGCACAAGTGA
ATGTTGATAATGTCGATGTTAAGATTGGACGTGTTGATAAGGATCGAATCAGTGTTTATGCAAATACGACGGCTGACATT
CAAATGATGAACGAACCAAACCAAACTCTCGACTTGGTTTTAGAGTTCAGTGCGATTCCTGAATACCGTAAAGAATCAGG
TGAGATTTATTTAAAATCATTACGATTGGAAAAGTTTGAGGATAAAACTAATCAATTATCTCCGGAGTTAAGTTCACTCT
TAAAACCGGCGATTTCAATTATTGGCTATGGATTATCAAACCAACCAGCGTATAAGCTTAATGCGAATAAACTGAAAGAA
TCGCTTATCAAATCAGCAGAGCTTAATTTAGTTATAAAAAATAACCAGCTCGTGATCGAGCTTTTTGATTGA

Upstream 100 bases:

>100_bases
GGCTATAGAATTCGATTATCTTAAGTTACACTACGCGCATCCAGTTAACTGTTACATTGTCACGATTATATATGAAATCT
ATTAAGGCATATTTATACCT

Downstream 100 bases:

>100_bases
TATAAAGAATCAAGTTATAGTGCTTTAGGCCCATCGTGGATTTACATGACGTCTTATTTTAATAATTCATGTAAATCTGC
TTTTAATGATGACACTGTTT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKNLKLLFSFLFVLSLSGCTSYSITEQEMTDYLTDEINVDKSVGIPGLLYAQVNVDNVDVKIGRVDKDRISVYANTTADI
QMMNEPNQTLDLVLEFSAIPEYRKESGEIYLKSLRLEKFEDKTNQLSPELSSLLKPAISIIGYGLSNQPAYKLNANKLKE
SLIKSAELNLVIKNNQLVIELFD

Sequences:

>Translated_183_residues
MKNLKLLFSFLFVLSLSGCTSYSITEQEMTDYLTDEINVDKSVGIPGLLYAQVNVDNVDVKIGRVDKDRISVYANTTADI
QMMNEPNQTLDLVLEFSAIPEYRKESGEIYLKSLRLEKFEDKTNQLSPELSSLLKPAISIIGYGLSNQPAYKLNANKLKE
SLIKSAELNLVIKNNQLVIELFD
>Mature_183_residues
MKNLKLLFSFLFVLSLSGCTSYSITEQEMTDYLTDEINVDKSVGIPGLLYAQVNVDNVDVKIGRVDKDRISVYANTTADI
QMMNEPNQTLDLVLEFSAIPEYRKESGEIYLKSLRLEKFEDKTNQLSPELSSLLKPAISIIGYGLSNQPAYKLNANKLKE
SLIKSAELNLVIKNNQLVIELFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787302, Length=192, Percent_Identity=28.125, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010835 [H]

Pfam domain/function: PF07273 DUF1439 [H]

EC number: NA

Molecular weight: Translated: 20619; Mature: 20619

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLKLLFSFLFVLSLSGCTSYSITEQEMTDYLTDEINVDKSVGIPGLLYAQVNVDNVDV
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEE
KIGRVDKDRISVYANTTADIQMMNEPNQTLDLVLEFSAIPEYRKESGEIYLKSLRLEKFE
EEECCCCCCEEEEECCCEEEEEECCCCCCEEEEEEHHCCCHHHHCCCCEEEEEHHHHHHH
DKTNQLSPELSSLLKPAISIIGYGLSNQPAYKLNANKLKESLIKSAELNLVIKNNQLVIE
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHCEEEEEEECCEEEEE
LFD
EEC
>Mature Secondary Structure
MKNLKLLFSFLFVLSLSGCTSYSITEQEMTDYLTDEINVDKSVGIPGLLYAQVNVDNVDV
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEE
KIGRVDKDRISVYANTTADIQMMNEPNQTLDLVLEFSAIPEYRKESGEIYLKSLRLEKFE
EEECCCCCCEEEEECCCEEEEEECCCCCCEEEEEEHHCCCHHHHCCCCEEEEEHHHHHHH
DKTNQLSPELSSLLKPAISIIGYGLSNQPAYKLNANKLKESLIKSAELNLVIKNNQLVIE
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHCEEEEEEECCEEEEE
LFD
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2876892; 8905232; 9278503 [H]