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The map label for this gene is yebS [H]

Identifier: 209695045

GI number: 209695045

Start: 1642790

End: 1644016

Strand: Reverse

Name: yebS [H]

Synonym: VSAL_I1540

Alternate gene names: 209695045

Gene position: 1644016-1642790 (Counterclockwise)

Preceding gene: 209695046

Following gene: 209695044

Centisome position: 49.44

GC content: 40.02

Gene sequence:

>1227_bases
GTGGAAGACGCTAAGTTTCGTCGCTGTCACGGTTGTGACCTTGTTGTAGAAGTAGCGAAGGTAGACAAAAAGCAAAATGC
TCACTGTCCTCGCTGCAATACGCAGCTTTATCGTGGTAATCGTATTTCACTAAACAGTGATTTGGCGATTGCCATTGCTG
CGTTGTTACTATTTATACCTTCGCATTTTTTCCCACTCGTCACCATTAAACTATTTGGTGTCATGATCCCTGCTACATTG
CCATCAGGTTCAATCACTCTGATGTCTGAAGGGTTCCCAATGCTTGGGTTATTGATTCTATTTTGCAGCTCTATTGCGCC
TCTGCTTGTATGTTCTTCCGTTGTCGCAGCACACCTTGCCCTTAGAAAAAAATGGTTTAATTTATTTCGTATAAGCGTTA
CTACAGTACAACACTTAAAAAATTGGATGATGTTAGATGTCCTTCTCGTCAGTTTAGCGATTGCTTGTTTTAAAATACAA
GACCATGCCGATATTTTTGTCGGCTCTGGATTATACGGATTAATCCTTTTGCAGTTTGTCACTTCTTTACTGCTCACTCA
TGTAAGTGCGAGACGCTACTGGCGAGCATGGCAAAGAAAAAATCAAACGAAGATTGAAGCTCCAATTACGGACCCTCTCA
ATTCAATACATTGTGAGCACTGCCATTTTACCCAACAAGATGGAACTCATTGTGTTCGATGTAAACGTGCGATTCACAAA
AGAAAACCAAGGTCCATACAAAAAACATGGGCTTATTTAATCGCTGCTAGTATTTTCATTATTCCTGCGAATATTATTTC
CATTTCAATTTTGTTAACAAATGGTAAGCGCCTTGAAGACACTATTTTTTCTGGGGTTGCAGGGCTCATTCAATCGAACA
TGTACGGTATTGCCATCATAATCTTTGTTGCCAGTATCATCGTACCTGTGGCGAAAATACTGGGGCTAGGTTACCTGCTC
CTTTGCATTCAATTTAAACGTACTATTTTTCATCGCCAGCGAATGTCTATCTATGTCGCGGTAAAATTGATAGGGAAATG
GTCAGTCATGGATTTATTCGTAATTTCAATTATGATGACCTTGATTGACCGTGGACAAATTTTAGATTTTACACCCGGAA
TGGGTGCAGTAGCCTTTGGCTTAGTTGTAGTTTTTACTATGCTAGCCGTAGAAAGTTTTGATTCTCGTCTAATTTGGGAT
AATTATGAACGCGCCAAAAACCGTTGA

Upstream 100 bases:

>100_bases
AAGTAACTCAATCAGGAACTCATCATGAACTCGTTACACAACAAGGACTCTATCAGACACTTTATGGATCAATACAAAGT
TAATCTCTTGGATAACCATC

Downstream 100 bases:

>100_bases
TTCTTCAATCGAAAAAGTAAACATCAAAACCGAACGTGGAATATCCCCACTTTGGATCTTGCCCTTACTTGCCCTTTGCT
TAGGCGGCTGGCTTGTATAT

Product: paraquat-inducible membrane protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MEDAKFRRCHGCDLVVEVAKVDKKQNAHCPRCNTQLYRGNRISLNSDLAIAIAALLLFIPSHFFPLVTIKLFGVMIPATL
PSGSITLMSEGFPMLGLLILFCSSIAPLLVCSSVVAAHLALRKKWFNLFRISVTTVQHLKNWMMLDVLLVSLAIACFKIQ
DHADIFVGSGLYGLILLQFVTSLLLTHVSARRYWRAWQRKNQTKIEAPITDPLNSIHCEHCHFTQQDGTHCVRCKRAIHK
RKPRSIQKTWAYLIAASIFIIPANIISISILLTNGKRLEDTIFSGVAGLIQSNMYGIAIIIFVASIIVPVAKILGLGYLL
LCIQFKRTIFHRQRMSIYVAVKLIGKWSVMDLFVISIMMTLIDRGQILDFTPGMGAVAFGLVVVFTMLAVESFDSRLIWD
NYERAKNR

Sequences:

>Translated_408_residues
MEDAKFRRCHGCDLVVEVAKVDKKQNAHCPRCNTQLYRGNRISLNSDLAIAIAALLLFIPSHFFPLVTIKLFGVMIPATL
PSGSITLMSEGFPMLGLLILFCSSIAPLLVCSSVVAAHLALRKKWFNLFRISVTTVQHLKNWMMLDVLLVSLAIACFKIQ
DHADIFVGSGLYGLILLQFVTSLLLTHVSARRYWRAWQRKNQTKIEAPITDPLNSIHCEHCHFTQQDGTHCVRCKRAIHK
RKPRSIQKTWAYLIAASIFIIPANIISISILLTNGKRLEDTIFSGVAGLIQSNMYGIAIIIFVASIIVPVAKILGLGYLL
LCIQFKRTIFHRQRMSIYVAVKLIGKWSVMDLFVISIMMTLIDRGQILDFTPGMGAVAFGLVVVFTMLAVESFDSRLIWD
NYERAKNR
>Mature_408_residues
MEDAKFRRCHGCDLVVEVAKVDKKQNAHCPRCNTQLYRGNRISLNSDLAIAIAALLLFIPSHFFPLVTIKLFGVMIPATL
PSGSITLMSEGFPMLGLLILFCSSIAPLLVCSSVVAAHLALRKKWFNLFRISVTTVQHLKNWMMLDVLLVSLAIACFKIQ
DHADIFVGSGLYGLILLQFVTSLLLTHVSARRYWRAWQRKNQTKIEAPITDPLNSIHCEHCHFTQQDGTHCVRCKRAIHK
RKPRSIQKTWAYLIAASIFIIPANIISISILLTNGKRLEDTIFSGVAGLIQSNMYGIAIIIFVASIIVPVAKILGLGYLL
LCIQFKRTIFHRQRMSIYVAVKLIGKWSVMDLFVISIMMTLIDRGQILDFTPGMGAVAFGLVVVFTMLAVESFDSRLIWD
NYERAKNR

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=409, Percent_Identity=37.1638141809291, Blast_Score=262, Evalue=4e-71,
Organism=Escherichia coli, GI1787183, Length=420, Percent_Identity=29.5238095238095, Blast_Score=159, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 45878; Mature: 45878

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDAKFRRCHGCDLVVEVAKVDKKQNAHCPRCNTQLYRGNRISLNSDLAIAIAALLLFIP
CCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEECCCCHHHHHHHHHHHHH
SHFFPLVTIKLFGVMIPATLPSGSITLMSEGFPMLGLLILFCSSIAPLLVCSSVVAAHLA
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKKWFNLFRISVTTVQHLKNWMMLDVLLVSLAIACFKIQDHADIFVGSGLYGLILLQFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHH
TSLLLTHVSARRYWRAWQRKNQTKIEAPITDPLNSIHCEHCHFTQQDGTHCVRCKRAIHK
HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHH
RKPRSIQKTWAYLIAASIFIIPANIISISILLTNGKRLEDTIFSGVAGLIQSNMYGIAII
CCCCHHHHHHHHHHHHHHHHEEHHHHEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHH
IFVASIIVPVAKILGLGYLLLCIQFKRTIFHRQRMSIYVAVKLIGKWSVMDLFVISIMMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCHHHHHHHHHHHHHH
LIDRGQILDFTPGMGAVAFGLVVVFTMLAVESFDSRLIWDNYERAKNR
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC
>Mature Secondary Structure
MEDAKFRRCHGCDLVVEVAKVDKKQNAHCPRCNTQLYRGNRISLNSDLAIAIAALLLFIP
CCCCCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEECCCCHHHHHHHHHHHHH
SHFFPLVTIKLFGVMIPATLPSGSITLMSEGFPMLGLLILFCSSIAPLLVCSSVVAAHLA
HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRKKWFNLFRISVTTVQHLKNWMMLDVLLVSLAIACFKIQDHADIFVGSGLYGLILLQFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHH
TSLLLTHVSARRYWRAWQRKNQTKIEAPITDPLNSIHCEHCHFTQQDGTHCVRCKRAIHK
HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHH
RKPRSIQKTWAYLIAASIFIIPANIISISILLTNGKRLEDTIFSGVAGLIQSNMYGIAII
CCCCHHHHHHHHHHHHHHHHEEHHHHEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHH
IFVASIIVPVAKILGLGYLLLCIQFKRTIFHRQRMSIYVAVKLIGKWSVMDLFVISIMMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCHHHHHHHHHHHHHH
LIDRGQILDFTPGMGAVAFGLVVVFTMLAVESFDSRLIWDNYERAKNR
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]