The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is insG [H]

Identifier: 209694878

GI number: 209694878

Start: 1465291

End: 1466616

Strand: Reverse

Name: insG [H]

Synonym: VSAL_I1349

Alternate gene names: 209694878

Gene position: 1466616-1465291 (Counterclockwise)

Preceding gene: 209694884

Following gene: 209694877

Centisome position: 44.11

GC content: 39.14

Gene sequence:

>1326_bases
ATGCACTTGGATTTTTTTATGGATGTTTCTCAAGCTCTAAACATAATCAATGACTGGAAACCTAGCAACGTAGAGACTCT
CGCTGATTTACTTCCAATCCATCTGATTGATGAGGCTTATTCTCTCACTGATACGGTGACGATGAGGAAGCGAAAGCTTA
CTCTTGAATCAATGGTATGGTTACTTGTTGGTATGGCTATCTATAACAATAAATCCATGAAGGATTTAGTTAATCAGCTT
GATATTGTAGACCGTACAGGTAAAGCTTTTGTCGCTCCTAGTGCCCTTACTCAGCGCCGAAAAAATCTAGGTGAAGCAGC
AATGAAAGCAGTCTTTGAGCGAATGACAAGTTCCTGGCTTAAGAGTGCTAATCTTCCTAAATGGAATGGACTAACTCTCT
TAGGCGTTGATGGTGTTGTATGGAGAGCACCTGATAACCAGAAAAATGAAGAGGCTTTTTCTCGCCAAAAAGGAACTCAA
TATCCACAGGTAAGAATGGTTTGCCAAATGGAGCTAAGCAGTCATCTTATTACAGCGAGCGCTTTCGATAATTACAATAC
AAATGAAATGATATTGGCAGAGAAGTTAATAGATAGTACACCTGACCATAGCGTAACTATGTTCGATAAGGGGTTCTATT
CATTAGGATTACTACATAAATGGCAGATGACAGGCTCAGAGCGTCACTGGCTTATTCCCCTTAAAAAAAATACTCAATAT
GAAATAATTCGATCGCTAGGTCGTAATGACAAACTTGTTATTCTTCGGAGTAACCCAAGAGCAAGAAAACTGTTTTCTAA
TTTACCTGAAACGATGACTGCTCGTCTCGTGACTCGAAAAATTAAAGGAAAAGATTATCAAGTTCTGACGTCAATGATTG
ACCCATTACGTTACCCATTGAAAGATATAGTCGGTCTTTATGAGCATCGTTGGGAAATAGAATTGGGTTACCGAGAGCAG
AAACAATACATGTTAGGAAATCGCTTAACACTACGAAGCCGTCTGCCTGAATTAGTGAAACAAGAACTATGGGGTATCTT
GTTGACTTATAATTTAATTCGCTACCAAATGGTAGAGCTTTGCTTTAATTTAAAAGGAAATTATCTCCCTTATCAATTGA
GTTTTAATGGGACACTTGCTCATGTATCTGCATTATTAGTTGGTTTACCATACTCAACGCCAGGAGCGATCCCTCGACAA
TTAAAAGGCTTCCACCAGATGGCTGAAAGCTTAATACTTGATAGGCGAAGGGAAAGAACATTCCCTCGAATGGTAAAACC
AAGACCTCAACGATATGCCAGAAACAAGAATGCCATTCACCCTTAA

Upstream 100 bases:

>100_bases
GCATAAAAAAAGCACTCAATAATTGAGTAATGCCGATCATTTAAGGTAAATATGATCGGTTGACCGATCCTTTTTAGATG
TCAAAATCCAAGTGTATTTT

Downstream 100 bases:

>100_bases
GTGAACGGCATTACTCAATAATTGAGTGCTTCTCATAAATTATAGAAACTATTTAACCTGAATTCTGGATAAGGCTGAAC
TAATTGCCCACCTAACGATC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MHLDFFMDVSQALNIINDWKPSNVETLADLLPIHLIDEAYSLTDTVTMRKRKLTLESMVWLLVGMAIYNNKSMKDLVNQL
DIVDRTGKAFVAPSALTQRRKNLGEAAMKAVFERMTSSWLKSANLPKWNGLTLLGVDGVVWRAPDNQKNEEAFSRQKGTQ
YPQVRMVCQMELSSHLITASAFDNYNTNEMILAEKLIDSTPDHSVTMFDKGFYSLGLLHKWQMTGSERHWLIPLKKNTQY
EIIRSLGRNDKLVILRSNPRARKLFSNLPETMTARLVTRKIKGKDYQVLTSMIDPLRYPLKDIVGLYEHRWEIELGYREQ
KQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVELCFNLKGNYLPYQLSFNGTLAHVSALLVGLPYSTPGAIPRQ
LKGFHQMAESLILDRRRERTFPRMVKPRPQRYARNKNAIHP

Sequences:

>Translated_441_residues
MHLDFFMDVSQALNIINDWKPSNVETLADLLPIHLIDEAYSLTDTVTMRKRKLTLESMVWLLVGMAIYNNKSMKDLVNQL
DIVDRTGKAFVAPSALTQRRKNLGEAAMKAVFERMTSSWLKSANLPKWNGLTLLGVDGVVWRAPDNQKNEEAFSRQKGTQ
YPQVRMVCQMELSSHLITASAFDNYNTNEMILAEKLIDSTPDHSVTMFDKGFYSLGLLHKWQMTGSERHWLIPLKKNTQY
EIIRSLGRNDKLVILRSNPRARKLFSNLPETMTARLVTRKIKGKDYQVLTSMIDPLRYPLKDIVGLYEHRWEIELGYREQ
KQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVELCFNLKGNYLPYQLSFNGTLAHVSALLVGLPYSTPGAIPRQ
LKGFHQMAESLILDRRRERTFPRMVKPRPQRYARNKNAIHP
>Mature_441_residues
MHLDFFMDVSQALNIINDWKPSNVETLADLLPIHLIDEAYSLTDTVTMRKRKLTLESMVWLLVGMAIYNNKSMKDLVNQL
DIVDRTGKAFVAPSALTQRRKNLGEAAMKAVFERMTSSWLKSANLPKWNGLTLLGVDGVVWRAPDNQKNEEAFSRQKGTQ
YPQVRMVCQMELSSHLITASAFDNYNTNEMILAEKLIDSTPDHSVTMFDKGFYSLGLLHKWQMTGSERHWLIPLKKNTQY
EIIRSLGRNDKLVILRSNPRARKLFSNLPETMTARLVTRKIKGKDYQVLTSMIDPLRYPLKDIVGLYEHRWEIELGYREQ
KQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVELCFNLKGNYLPYQLSFNGTLAHVSALLVGLPYSTPGAIPRQ
LKGFHQMAESLILDRRRERTFPRMVKPRPQRYARNKNAIHP

Specific function: Involved in the transposition of the insertion sequence IS4 [H]

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1790729, Length=432, Percent_Identity=48.3796296296296, Blast_Score=412, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 51146; Mature: 51146

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLDFFMDVSQALNIINDWKPSNVETLADLLPIHLIDEAYSLTDTVTMRKRKLTLESMVW
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVGMAIYNNKSMKDLVNQLDIVDRTGKAFVAPSALTQRRKNLGEAAMKAVFERMTSSWL
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSANLPKWNGLTLLGVDGVVWRAPDNQKNEEAFSRQKGTQYPQVRMVCQMELSSHLITAS
HHCCCCCCCCEEEEECCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEH
AFDNYNTNEMILAEKLIDSTPDHSVTMFDKGFYSLGLLHKWQMTGSERHWLIPLKKNTQY
HCCCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHEEEECCCCCCEEEEEECCCCHH
EIIRSLGRNDKLVILRSNPRARKLFSNLPETMTARLVTRKIKGKDYQVLTSMIDPLRYPL
HHHHHHCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCH
KDIVGLYEHRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVEL
HHHHHHHHHCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFNLKGNYLPYQLSFNGTLAHVSALLVGLPYSTPGAIPRQLKGFHQMAESLILDRRRERT
HHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
FPRMVKPRPQRYARNKNAIHP
CCHHCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MHLDFFMDVSQALNIINDWKPSNVETLADLLPIHLIDEAYSLTDTVTMRKRKLTLESMVW
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVGMAIYNNKSMKDLVNQLDIVDRTGKAFVAPSALTQRRKNLGEAAMKAVFERMTSSWL
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSANLPKWNGLTLLGVDGVVWRAPDNQKNEEAFSRQKGTQYPQVRMVCQMELSSHLITAS
HHCCCCCCCCEEEEECCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEH
AFDNYNTNEMILAEKLIDSTPDHSVTMFDKGFYSLGLLHKWQMTGSERHWLIPLKKNTQY
HCCCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHEEEECCCCCCEEEEEECCCCHH
EIIRSLGRNDKLVILRSNPRARKLFSNLPETMTARLVTRKIKGKDYQVLTSMIDPLRYPL
HHHHHHCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCH
KDIVGLYEHRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGILLTYNLIRYQMVEL
HHHHHHHHHCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFNLKGNYLPYQLSFNGTLAHVSALLVGLPYSTPGAIPRQLKGFHQMAESLILDRRRERT
HHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
FPRMVKPRPQRYARNKNAIHP
CCHHCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6268937; 7610040; 9278503 [H]