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The map label for this gene is vasQ-1

Identifier: 209694718

GI number: 209694718

Start: 1274890

End: 1275399

Strand: Direct

Name: vasQ-1

Synonym: VSAL_I1171

Alternate gene names: NA

Gene position: 1274890-1275399 (Clockwise)

Preceding gene: 209694717

Following gene: 209694719

Centisome position: 38.34

GC content: 35.29

Gene sequence:

>510_bases
ATGGCTTTGAATTCACAACATAAGCGTGTTAGTAAAAACCGTGTAAGTATTACTTATGATGTTGAAACAAACGGCGCGGT
AGAAACCAAAGAATTACCATTTGTTGTTGGTGTTATTGGCGATTTTTCTGGACATAAATCAGAATCAGAAAAAGTTGATT
TAGAAGAGCGCGAATTTACAAGTATTGATAAAGATAATTTCGATATGGTAATGGGTCAAGTCGCCCCAACGCTCTCTTAT
AAAGTTGATAATAAATTAGCGAGTGATGAAAGCCAATTTGAAGTGAATATGAATTTCAGCTCAATGAAAGATTTTCATCC
TGAGAGCGTGGTAGAACAAATAGATCCATTGAAGAAGTTAGTAGAAACTCGTAATCAACTTAAAGTGCTATTAAGTAAAG
CGGATCGTTCTAGAGATCTTGAGCGATTACTAAAAGAAATCCTACAAAGTACAGATGCAATTCAAGGTTTAGCGCAAGAA
TTGGGTCTGAATAACGAAGGAGCTGAATAA

Upstream 100 bases:

>100_bases
AAGGTAAGTTATTGTCTGGCGCTCAGTAATTTTTATAATTAAGTACCTCGTAATGAGGTACTTAACTCTTGCTATTTAAT
TTATAAACGAGGGCACAGCT

Downstream 100 bases:

>100_bases
TGTCTACAGAGCAGCAAATAACACCAGAAGGTACTATAGAAGCGGGGATAACAATCAGTATTCTTGATCGTGCGATTACC
GCTACAGCTCAAACACCTGT

Product: type VI secretion protein VasQ-1

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; T6ss S; Intracellular Growth Locus Subunit A; Protein ImpB; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion Protein VasQ; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDFSGHKSESEKVDLEEREFTSIDKDNFDMVMGQVAPTLSY
KVDNKLASDESQFEVNMNFSSMKDFHPESVVEQIDPLKKLVETRNQLKVLLSKADRSRDLERLLKEILQSTDAIQGLAQE
LGLNNEGAE

Sequences:

>Translated_169_residues
MALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDFSGHKSESEKVDLEEREFTSIDKDNFDMVMGQVAPTLSY
KVDNKLASDESQFEVNMNFSSMKDFHPESVVEQIDPLKKLVETRNQLKVLLSKADRSRDLERLLKEILQSTDAIQGLAQE
LGLNNEGAE
>Mature_168_residues
ALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDFSGHKSESEKVDLEEREFTSIDKDNFDMVMGQVAPTLSYK
VDNKLASDESQFEVNMNFSSMKDFHPESVVEQIDPLKKLVETRNQLKVLLSKADRSRDLERLLKEILQSTDAIQGLAQEL
GLNNEGAE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19020; Mature: 18888

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDFSGHKSESEKVDLEEREFT
CCCCCHHHHHHCCCEEEEEEECCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHC
SIDKDNFDMVMGQVAPTLSYKVDNKLASDESQFEVNMNFSSMKDFHPESVVEQIDPLKKL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHH
VETRNQLKVLLSKADRSRDLERLLKEILQSTDAIQGLAQELGLNNEGAE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDFSGHKSESEKVDLEEREFT
CCCCHHHHHHCCCEEEEEEECCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHC
SIDKDNFDMVMGQVAPTLSYKVDNKLASDESQFEVNMNFSSMKDFHPESVVEQIDPLKKL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHH
VETRNQLKVLLSKADRSRDLERLLKEILQSTDAIQGLAQELGLNNEGAE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA