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The map label for this gene is vasJ

Identifier: 209694676

GI number: 209694676

Start: 1226761

End: 1228302

Strand: Reverse

Name: vasJ

Synonym: VSAL_I1125

Alternate gene names: NA

Gene position: 1228302-1226761 (Counterclockwise)

Preceding gene: 209694677

Following gene: 209694675

Centisome position: 36.94

GC content: 32.23

Gene sequence:

>1542_bases
ATGTGTACGTATAAAACAATTCTTTCTGACTTATCAGGAGAGAATCACTTTGGCATAGATTTAAGTTATGAAACTGAATT
TGAATCTATTGAAAAAGAAGTCGTAAAATCAACCGACATTTTTGCAACGACTAAAACTGACTGGTCAGAAGTTAGATCTA
ACTCTTTGAATTTACTTCAATATAAAAGTAAAGACTATCGTTTACTTCATTGGTTGCTATTATCAATAAAAAAAGAAAAT
GACCATAATACGTTCATTATTATTCTTCCAATAATTAATCAATTTTTCATTAAATATAGCACGACTATTTATCCATTAAG
AGAGAAACAGCTTTACTCAACGATTAATAAAATAATAGTAATCATTGATGATATAGTCAAAAGTATAATTGATAATTCAA
TAGATACTAATGCATCAAATAATTTAATCGCATTATTATCAATATTAGATATAACGATTGATGAATCATTTAATGCCAAT
ACCGATAATTTATACTTAACAATTAATAAACTAAGTATAAATATAAAAAGAATATCATCAGAAAAAAAAGAAGGGAGTAC
TTCCTCATCTCCTTTAATTAATAATGAGGCTATCAAATCAATCGCATCCGTTTCTTTTTCTATCGATCCCATTACCAATG
ATCGCGATGCAAATAAAGCATTTCGACATTTGCAGGATATTGCCCGTAACTTATCAAAATTTTGGCTTACTCAACGAATT
AACAACGAAAAAGCCTATCAACTAAACCGTACATTAACATGGCTACACATCATCCAACTCCCTGCGAGTAACGATGAAAA
GATAACCATGTTAAAACCGATCCCACAAACACGACTTCAATATTTCATCAAATTGAAGAATGAATCTGATCACGAAACAT
TATTACTTGAAATAGAAGAAAGCTTGTCAAAGTCGCCTTTTTGGATAGATGGGCATCTTATCGCTTGGGAAAGCTTAATC
GCATTAAACCACCCAGAAGCAGCTCAAATCATTCTCGAGCAAATGGCATTATTAATTAAAAAGATCCCTGAAATTATCAC
ATTAAAATTTGATGATGGAACTGAATTTGCGAGTAATAGTGCAAAAAACTGGATCGCAGAACATTGCACCTCAGCAGCAC
CATCTCAAATAGCAGCAAATACTTACAATGAAATAAGTGATGGCACAGATTGGGAAGACGCTTTACAAGCTGCACAATCG
GTTCTCACTACCGACAATTTATCAGACGCAATTCTTCCTTTAATTACTGGACACAACCAATGCCGTTCAGACAGAGAAGT
TTTCTTTTGGAAGTTTTCACAAGCCAAATTGTTATATCAAGCTCATAAATTTGACTTAGTTTGTGCCTTAACAAGTTGGT
TAGATTCTCGCTACTCTCACTCAATCTTAATTCATTGGGATCCAGTACTAGAAGAACGATTATTAGAATTATGGCTTTCA
TCTCAAAACAAGCTACCCAATAAAGAACAAGACACTCATTTAATGAATACATTACGAGAAAGACTCTGTTGCTTAAATCC
AATGCGAGTTCTTAATTTTTAA

Upstream 100 bases:

>100_bases
ATCTCCCCCATAAATAAAAATACAACTATAAAATAAAACCATTATTACTAATTAATTTTAAATATTAACTTTCTTACAAT
GTTACTTTGCTAGGGTAATT

Downstream 100 bases:

>100_bases
ACTTAGGAGACATCATGTCAAAAGACGGATCTGTAGCGCCAAAAGAGCGCATAAATGTGACATTTAAACCATCGTCAGGT
GATGCGGCGGAGGCACTTGA

Product: type VI secretion protein VasJ

Products: NA

Alternate protein names: Type VI Secretion-Associated Protein; ImpA-Like; Type VI Secretion Protein VasJ; Protein ImpA; Type VI Secretion-Associated Protein Family

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MCTYKTILSDLSGENHFGIDLSYETEFESIEKEVVKSTDIFATTKTDWSEVRSNSLNLLQYKSKDYRLLHWLLLSIKKEN
DHNTFIIILPIINQFFIKYSTTIYPLREKQLYSTINKIIVIIDDIVKSIIDNSIDTNASNNLIALLSILDITIDESFNAN
TDNLYLTINKLSINIKRISSEKKEGSTSSSPLINNEAIKSIASVSFSIDPITNDRDANKAFRHLQDIARNLSKFWLTQRI
NNEKAYQLNRTLTWLHIIQLPASNDEKITMLKPIPQTRLQYFIKLKNESDHETLLLEIEESLSKSPFWIDGHLIAWESLI
ALNHPEAAQIILEQMALLIKKIPEIITLKFDDGTEFASNSAKNWIAEHCTSAAPSQIAANTYNEISDGTDWEDALQAAQS
VLTTDNLSDAILPLITGHNQCRSDREVFFWKFSQAKLLYQAHKFDLVCALTSWLDSRYSHSILIHWDPVLEERLLELWLS
SQNKLPNKEQDTHLMNTLRERLCCLNPMRVLNF

Sequences:

>Translated_513_residues
MCTYKTILSDLSGENHFGIDLSYETEFESIEKEVVKSTDIFATTKTDWSEVRSNSLNLLQYKSKDYRLLHWLLLSIKKEN
DHNTFIIILPIINQFFIKYSTTIYPLREKQLYSTINKIIVIIDDIVKSIIDNSIDTNASNNLIALLSILDITIDESFNAN
TDNLYLTINKLSINIKRISSEKKEGSTSSSPLINNEAIKSIASVSFSIDPITNDRDANKAFRHLQDIARNLSKFWLTQRI
NNEKAYQLNRTLTWLHIIQLPASNDEKITMLKPIPQTRLQYFIKLKNESDHETLLLEIEESLSKSPFWIDGHLIAWESLI
ALNHPEAAQIILEQMALLIKKIPEIITLKFDDGTEFASNSAKNWIAEHCTSAAPSQIAANTYNEISDGTDWEDALQAAQS
VLTTDNLSDAILPLITGHNQCRSDREVFFWKFSQAKLLYQAHKFDLVCALTSWLDSRYSHSILIHWDPVLEERLLELWLS
SQNKLPNKEQDTHLMNTLRERLCCLNPMRVLNF
>Mature_513_residues
MCTYKTILSDLSGENHFGIDLSYETEFESIEKEVVKSTDIFATTKTDWSEVRSNSLNLLQYKSKDYRLLHWLLLSIKKEN
DHNTFIIILPIINQFFIKYSTTIYPLREKQLYSTINKIIVIIDDIVKSIIDNSIDTNASNNLIALLSILDITIDESFNAN
TDNLYLTINKLSINIKRISSEKKEGSTSSSPLINNEAIKSIASVSFSIDPITNDRDANKAFRHLQDIARNLSKFWLTQRI
NNEKAYQLNRTLTWLHIIQLPASNDEKITMLKPIPQTRLQYFIKLKNESDHETLLLEIEESLSKSPFWIDGHLIAWESLI
ALNHPEAAQIILEQMALLIKKIPEIITLKFDDGTEFASNSAKNWIAEHCTSAAPSQIAANTYNEISDGTDWEDALQAAQS
VLTTDNLSDAILPLITGHNQCRSDREVFFWKFSQAKLLYQAHKFDLVCALTSWLDSRYSHSILIHWDPVLEERLLELWLS
SQNKLPNKEQDTHLMNTLRERLCCLNPMRVLNF

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59011; Mature: 59011

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTYKTILSDLSGENHFGIDLSYETEFESIEKEVVKSTDIFATTKTDWSEVRSNSLNLLQ
CCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCEEEE
YKSKDYRLLHWLLLSIKKENDHNTFIIILPIINQFFIKYSTTIYPLREKQLYSTINKIIV
ECCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHH
IIDDIVKSIIDNSIDTNASNNLIALLSILDITIDESFNANTDNLYLTINKLSINIKRISS
HHHHHHHHHHCCCCCCCCCCCHHHEEHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEECCC
EKKEGSTSSSPLINNEAIKSIASVSFSIDPITNDRDANKAFRHLQDIARNLSKFWLTQRI
HHHCCCCCCCCCCCHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NNEKAYQLNRTLTWLHIIQLPASNDEKITMLKPIPQTRLQYFIKLKNESDHETLLLEIEE
CCCHHEEHHCEEEEEEEEECCCCCCCEEEEECCCCHHHHHEEEEECCCCCCCEEEEEEHH
SLSKSPFWIDGHLIAWESLIALNHPEAAQIILEQMALLIKKIPEIITLKFDDGTEFASNS
HCCCCCEEECCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHCCC
AKNWIAEHCTSAAPSQIAANTYNEISDGTDWEDALQAAQSVLTTDNLSDAILPLITGHNQ
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHH
CRSDREVFFWKFSQAKLLYQAHKFDLVCALTSWLDSRYSHSILIHWDPVLEERLLELWLS
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHC
SQNKLPNKEQDTHLMNTLRERLCCLNPMRVLNF
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MCTYKTILSDLSGENHFGIDLSYETEFESIEKEVVKSTDIFATTKTDWSEVRSNSLNLLQ
CCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCEEEE
YKSKDYRLLHWLLLSIKKENDHNTFIIILPIINQFFIKYSTTIYPLREKQLYSTINKIIV
ECCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHH
IIDDIVKSIIDNSIDTNASNNLIALLSILDITIDESFNANTDNLYLTINKLSINIKRISS
HHHHHHHHHHCCCCCCCCCCCHHHEEHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEECCC
EKKEGSTSSSPLINNEAIKSIASVSFSIDPITNDRDANKAFRHLQDIARNLSKFWLTQRI
HHHCCCCCCCCCCCHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NNEKAYQLNRTLTWLHIIQLPASNDEKITMLKPIPQTRLQYFIKLKNESDHETLLLEIEE
CCCHHEEHHCEEEEEEEEECCCCCCCEEEEECCCCHHHHHEEEEECCCCCCCEEEEEEHH
SLSKSPFWIDGHLIAWESLIALNHPEAAQIILEQMALLIKKIPEIITLKFDDGTEFASNS
HCCCCCEEECCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHCCC
AKNWIAEHCTSAAPSQIAANTYNEISDGTDWEDALQAAQSVLTTDNLSDAILPLITGHNQ
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHH
CRSDREVFFWKFSQAKLLYQAHKFDLVCALTSWLDSRYSHSILIHWDPVLEERLLELWLS
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHC
SQNKLPNKEQDTHLMNTLRERLCCLNPMRVLNF
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA