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The map label for this gene is insI1 [C]

Identifier: 209694648

GI number: 209694648

Start: 1184217

End: 1185083

Strand: Reverse

Name: insI1 [C]

Synonym: VSAL_I1090

Alternate gene names: 209694648

Gene position: 1185083-1184217 (Counterclockwise)

Preceding gene: 209694649

Following gene: 209694647

Centisome position: 35.64

GC content: 39.79

Gene sequence:

>867_bases
ATGGGATACCAATATAAGCAACTGACACTAGGTGAAAGATACCAGATTGAAGCGTGGAATACACATAGTATTTCTGCTCG
TGAAATAGGACAAAAATTAAAACGGAGCAATGGCTCCATTTCAAAGGAACTACGACGTTGTCCTGCTGGAAGCTATTCTG
CCGAGCAAGCGCATAAACACGCTTTCCAAAAAAGAACACTTTCGATTAAGCACACAAAATGCAGCCAAAAGAATAAAAAA
ATAATTCACCTATATCTTCAGCTTGGTTGGAGCCCAGAGCAAATATCTGGACGAATGCGTAGAGAAAAAATAGAAAATAC
AATATGTTGCAGTACTATTTACAACGCAATTAAAAGAGAGCAGTGGCAAAGGATGCTTGCTCGAAAAGGCAAAAAATACA
AACAACGCAAAGGTGTAGAAGCAGGAGCAAGACTCATTCCTAACCGCATTGATATATCTCAACGCCCTGCTATTGTCGAT
GATAAATCTGAGGTTGGTCACTGGGAAGGTGACACTGTTTATGGTCAAGACGGGTATTTAGTAACGATGGTAGAACGAGT
GTCTAAGCTATTAGTTACGTGCAAAGTACGCAATAAATCCAAAAAGGCCGTTACTCGCGGGATAAATCGCATGATGAAGC
CCTTTAAAGAGCTTTGCAAAACAATCACATTTGATAATGGCGGAGAGTTCGCAGGTCATGCTAAGATAGCTAAGCATCTG
AACTGTGACATTTATTTTGCTAAACCTTACCATTCTTGGCAACGAGGTTTGAATGAAAATACCAATGGTTTACTAAGACG
TTTTTTCCCAAAGAGAATGGCCATTGGAGAACTTACTGCAAAAGAGATAAACAGGCAGAGTTTTTGA

Upstream 100 bases:

>100_bases
TAACCCTAGGTTCCAAGAATAACCGACACACTTTGGTATAGATTTGAGAGTCAGTTGCCTATAAGCTTCAAGCTCTCACA
CAATCAACTAAGGTAACCCC

Downstream 100 bases:

>100_bases
TTAATTCTCGACCTAGAAAGACATTAAATTTTCTGAGTCCGAGCGAGTTTTTAAACGGTAAGAGTGTGTCGGTTATTGTT
ACGATCTAGCAACTCGTTAT

Product: transposase

Products: NA

Alternate protein names: Transposon TN4551 [H]

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MGYQYKQLTLGERYQIEAWNTHSISAREIGQKLKRSNGSISKELRRCPAGSYSAEQAHKHAFQKRTLSIKHTKCSQKNKK
IIHLYLQLGWSPEQISGRMRREKIENTICCSTIYNAIKREQWQRMLARKGKKYKQRKGVEAGARLIPNRIDISQRPAIVD
DKSEVGHWEGDTVYGQDGYLVTMVERVSKLLVTCKVRNKSKKAVTRGINRMMKPFKELCKTITFDNGGEFAGHAKIAKHL
NCDIYFAKPYHSWQRGLNENTNGLLRRFFPKRMAIGELTAKEINRQSF

Sequences:

>Translated_288_residues
MGYQYKQLTLGERYQIEAWNTHSISAREIGQKLKRSNGSISKELRRCPAGSYSAEQAHKHAFQKRTLSIKHTKCSQKNKK
IIHLYLQLGWSPEQISGRMRREKIENTICCSTIYNAIKREQWQRMLARKGKKYKQRKGVEAGARLIPNRIDISQRPAIVD
DKSEVGHWEGDTVYGQDGYLVTMVERVSKLLVTCKVRNKSKKAVTRGINRMMKPFKELCKTITFDNGGEFAGHAKIAKHL
NCDIYFAKPYHSWQRGLNENTNGLLRRFFPKRMAIGELTAKEINRQSF
>Mature_287_residues
GYQYKQLTLGERYQIEAWNTHSISAREIGQKLKRSNGSISKELRRCPAGSYSAEQAHKHAFQKRTLSIKHTKCSQKNKKI
IHLYLQLGWSPEQISGRMRREKIENTICCSTIYNAIKREQWQRMLARKGKKYKQRKGVEAGARLIPNRIDISQRPAIVDD
KSEVGHWEGDTVYGQDGYLVTMVERVSKLLVTCKVRNKSKKAVTRGINRMMKPFKELCKTITFDNGGEFAGHAKIAKHLN
CDIYFAKPYHSWQRGLNENTNGLLRRFFPKRMAIGELTAKEINRQSF

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=300, Percent_Identity=32.3333333333333, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1790736, Length=300, Percent_Identity=32.3333333333333, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787671, Length=300, Percent_Identity=32.3333333333333, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 33351; Mature: 33220

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYQYKQLTLGERYQIEAWNTHSISAREIGQKLKRSNGSISKELRRCPAGSYSAEQAHKH
CCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH
AFQKRTLSIKHTKCSQKNKKIIHLYLQLGWSPEQISGRMRREKIENTICCSTIYNAIKRE
HHHHHHCEEEHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWQRMLARKGKKYKQRKGVEAGARLIPNRIDISQRPAIVDDKSEVGHWEGDTVYGQDGYL
HHHHHHHHCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCEE
VTMVERVSKLLVTCKVRNKSKKAVTRGINRMMKPFKELCKTITFDNGGEFAGHAKIAKHL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC
NCDIYFAKPYHSWQRGLNENTNGLLRRFFPKRMAIGELTAKEINRQSF
CCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GYQYKQLTLGERYQIEAWNTHSISAREIGQKLKRSNGSISKELRRCPAGSYSAEQAHKH
CCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH
AFQKRTLSIKHTKCSQKNKKIIHLYLQLGWSPEQISGRMRREKIENTICCSTIYNAIKRE
HHHHHHCEEEHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWQRMLARKGKKYKQRKGVEAGARLIPNRIDISQRPAIVDDKSEVGHWEGDTVYGQDGYL
HHHHHHHHCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCEE
VTMVERVSKLLVTCKVRNKSKKAVTRGINRMMKPFKELCKTITFDNGGEFAGHAKIAKHL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC
NCDIYFAKPYHSWQRGLNENTNGLLRRFFPKRMAIGELTAKEINRQSF
CCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2820936 [H]