Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694597

Identifier: 209694597

GI number: 209694597

Start: 1131428

End: 1131850

Strand: Direct

Name: 209694597

Synonym: VSAL_I1037

Alternate gene names: NA

Gene position: 1131428-1131850 (Clockwise)

Preceding gene: 209694596

Following gene: 209694598

Centisome position: 34.03

GC content: 42.32

Gene sequence:

>423_bases
ATGAAGTATTACACGTTAAAGCGTCGTTACTTTGATTTTGGTACTTATTCTTACTTGTTTCGACAAGATGGCAGCAAAGT
ATGTTGTTTTGTAGAACCTGTTTGGGCGAATAACCAACCGTTCAAATCGTGTGTACCTGAGGGGGATTATGATCTTGTCC
CTCATACCAGTGAGAAGTATGGCGAATGCTACGCTCTTGAATCTGAGTTCTTAGGTGTGACGGTTTATGGTCCAAGTATC
CGTGATGCGTGTTTATGGCATATCGCTAATAAACCTTCACAGCTTGTTGGTTGTGGTGCGCCAGGTGTGGATTTTGGTTT
TCTTAGCGGTGAATGGAGTGTCAAAAGTTCTGGCGTTGCGTTCAAAGCATTAATGAAAGAATTGGGCGGTAAGCCTGCCC
GTTTAACAATAATGAAGGATTAA

Upstream 100 bases:

>100_bases
GCATTGAATGTGAAAAGGCTATTCCCAAGGCTCGACAAGAAGCAGTAAAAGGCTGCCAATATTGTGTGAACTGCCAAGAG
TTAGCGGATAAGGGGAAGTT

Downstream 100 bases:

>100_bases
CTATGAATTTTCTCATCGGAATTTTTGGAAAAAGTTTGTTGGATATTGCCAAAGGCATTTTTTTACAAATCACTTGGAAG
GTTATTGTCGAGCGTTTTGC

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKYYTLKRRYFDFGTYSYLFRQDGSKVCCFVEPVWANNQPFKSCVPEGDYDLVPHTSEKYGECYALESEFLGVTVYGPSI
RDACLWHIANKPSQLVGCGAPGVDFGFLSGEWSVKSSGVAFKALMKELGGKPARLTIMKD

Sequences:

>Translated_140_residues
MKYYTLKRRYFDFGTYSYLFRQDGSKVCCFVEPVWANNQPFKSCVPEGDYDLVPHTSEKYGECYALESEFLGVTVYGPSI
RDACLWHIANKPSQLVGCGAPGVDFGFLSGEWSVKSSGVAFKALMKELGGKPARLTIMKD
>Mature_140_residues
MKYYTLKRRYFDFGTYSYLFRQDGSKVCCFVEPVWANNQPFKSCVPEGDYDLVPHTSEKYGECYALESEFLGVTVYGPSI
RDACLWHIANKPSQLVGCGAPGVDFGFLSGEWSVKSSGVAFKALMKELGGKPARLTIMKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15695; Mature: 15695

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYYTLKRRYFDFGTYSYLFRQDGSKVCCFVEPVWANNQPFKSCVPEGDYDLVPHTSEKY
CCEEEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCC
GECYALESEFLGVTVYGPSIRDACLWHIANKPSQLVGCGAPGVDFGFLSGEWSVKSSGVA
CEEEEECCCEEEEEEECCCCCHHHHEEECCCCCEEEECCCCCCCEEEECCCCEECCCCCH
FKALMKELGGKPARLTIMKD
HHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MKYYTLKRRYFDFGTYSYLFRQDGSKVCCFVEPVWANNQPFKSCVPEGDYDLVPHTSEKY
CCEEEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCC
GECYALESEFLGVTVYGPSIRDACLWHIANKPSQLVGCGAPGVDFGFLSGEWSVKSSGVA
CEEEEECCCEEEEEEECCCCCHHHHEEECCCCCEEEECCCCCCCEEEECCCCEECCCCCH
FKALMKELGGKPARLTIMKD
HHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA