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The map label for this gene is 209694590

Identifier: 209694590

GI number: 209694590

Start: 1126756

End: 1127472

Strand: Direct

Name: 209694590

Synonym: VSAL_I1029

Alternate gene names: NA

Gene position: 1126756-1127472 (Clockwise)

Preceding gene: 209694589

Following gene: 209694591

Centisome position: 33.89

GC content: 43.65

Gene sequence:

>717_bases
ATGCGCTTATCTCCAGGTATGAGAGACAACCTTGCAAAAAGAGCAAACAAAGAGCTTAACGCTGTAACCGTAAGCTCAAT
GGCTGACACCAACAGCTTACACATTAAGCTGATTGACTTCGAAGAAGACCGCAAGCATTTACGCTCTTTTAATGCAATTG
CCGATCGTGTTGAGCATAAGCGCAGCGTTTTAGTTCCGAAATACAAACCGTATGTTCAAGCCTATTTAGAAAGTGGCGAC
CAGTTTGAAAATCCTATTTTTACCAACTTAGTGATCTGGTTATTCGACATTAAAGAACTGGATACCGCAATTGATTGGTG
TATGAAGGCAATCGAACGAGATTTGCCAACGCCAGAGAATTTCCGCCGTGATTGGCCGACATTCTGCGCCGATGAAGTAT
TGGCATGGGCCGAGCGTGAATCAGAACGCGGCCACTCTATTCAACCGTACTTCTCGCAAATATTTGAGAAGGTTCACACT
GAATGGCGTTTGCACGAAAAAGTGCAAGCCAAATGGTACAAGTTTGCAGGGTTATCGCTTATTCGAAATGAAGATGGCAA
CCCACAAGCAACCGCCATTGGCAATGTAGAAACACTAGAAAAAGCATTAGCTTTATTGCAGCTCGCGCATGAGAAACATC
GTCATGCAGGCGTAGGTACGCAAGTTAAAAAAATAGAACAACGTATTCGTGCCATTAAAGATGGCAAGAATCTGTAG

Upstream 100 bases:

>100_bases
TACGAAGGTTATGCCGTGGGCGCTCATGAAGGTTATGCAGGTTTTAACGAAGCAAAAGTGCATTTCGGTGCTACCCCTGC
TTAATAAAAGGTAAATAACG

Downstream 100 bases:

>100_bases
TCAATAACGACAACGTTAAAAGACTCCCATGCCACCGTGCCTCAGCTGACAAGAAATACAAGTGATTTATCACCCTGTTA
TTTTCTGTGTTCAGTGGCTT

Product: phage terminase, endonuclease subunit

Products: NA

Alternate protein names: Phage Small Terminase Subunit; Phage Terminase Subunit; Terminase Endonuclease Subunit; Phage Terminase Endonuclease Subunit; Terminase Endonuclease Subunit Bacteriophage Origin; Phage Gene

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MRLSPGMRDNLAKRANKELNAVTVSSMADTNSLHIKLIDFEEDRKHLRSFNAIADRVEHKRSVLVPKYKPYVQAYLESGD
QFENPIFTNLVIWLFDIKELDTAIDWCMKAIERDLPTPENFRRDWPTFCADEVLAWAERESERGHSIQPYFSQIFEKVHT
EWRLHEKVQAKWYKFAGLSLIRNEDGNPQATAIGNVETLEKALALLQLAHEKHRHAGVGTQVKKIEQRIRAIKDGKNL

Sequences:

>Translated_238_residues
MRLSPGMRDNLAKRANKELNAVTVSSMADTNSLHIKLIDFEEDRKHLRSFNAIADRVEHKRSVLVPKYKPYVQAYLESGD
QFENPIFTNLVIWLFDIKELDTAIDWCMKAIERDLPTPENFRRDWPTFCADEVLAWAERESERGHSIQPYFSQIFEKVHT
EWRLHEKVQAKWYKFAGLSLIRNEDGNPQATAIGNVETLEKALALLQLAHEKHRHAGVGTQVKKIEQRIRAIKDGKNL
>Mature_238_residues
MRLSPGMRDNLAKRANKELNAVTVSSMADTNSLHIKLIDFEEDRKHLRSFNAIADRVEHKRSVLVPKYKPYVQAYLESGD
QFENPIFTNLVIWLFDIKELDTAIDWCMKAIERDLPTPENFRRDWPTFCADEVLAWAERESERGHSIQPYFSQIFEKVHT
EWRLHEKVQAKWYKFAGLSLIRNEDGNPQATAIGNVETLEKALALLQLAHEKHRHAGVGTQVKKIEQRIRAIKDGKNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27649; Mature: 27649

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSPGMRDNLAKRANKELNAVTVSSMADTNSLHIKLIDFEEDRKHLRSFNAIADRVEHK
CCCCCCHHHHHHHHHCCHHHHEEHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
RSVLVPKYKPYVQAYLESGDQFENPIFTNLVIWLFDIKELDTAIDWCMKAIERDLPTPEN
HHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FRRDWPTFCADEVLAWAERESERGHSIQPYFSQIFEKVHTEWRLHEKVQAKWYKFAGLSL
HHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
IRNEDGNPQATAIGNVETLEKALALLQLAHEKHRHAGVGTQVKKIEQRIRAIKDGKNL
EECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLSPGMRDNLAKRANKELNAVTVSSMADTNSLHIKLIDFEEDRKHLRSFNAIADRVEHK
CCCCCCHHHHHHHHHCCHHHHEEHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
RSVLVPKYKPYVQAYLESGDQFENPIFTNLVIWLFDIKELDTAIDWCMKAIERDLPTPEN
HHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FRRDWPTFCADEVLAWAERESERGHSIQPYFSQIFEKVHTEWRLHEKVQAKWYKFAGLSL
HHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
IRNEDGNPQATAIGNVETLEKALALLQLAHEKHRHAGVGTQVKKIEQRIRAIKDGKNL
EECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA