The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694580

Identifier: 209694580

GI number: 209694580

Start: 1116387

End: 1116746

Strand: Direct

Name: 209694580

Synonym: VSAL_I1019

Alternate gene names: NA

Gene position: 1116387-1116746 (Clockwise)

Preceding gene: 209694579

Following gene: 209694581

Centisome position: 33.57

GC content: 33.89

Gene sequence:

>360_bases
ATGAACATTGTAGATGACCGAGTGAAACCCCGTATCAGTTCTGTTAAAGATGTGTATGAACAGCTTTTTTCTTTGGCTAG
ATTACTAAAAAATAAAGATTCGTTATTACCAATTATTGGTTTTGAGCATTTTTGTTTTACATCAGATACCTTGTCATCTC
ACTGTTGTGATTATTTTGACTCGTTGAGTGATCCTGAGTTCTGTAGAGAGATAATTTATAAGGTTGATAATATTGTTAAT
CCATCAGAGCCTCATGTTTCTATTCAGATTCAATTAATGCCATTAGCTGAGAGGCTATTGCTCCATAAAATGTTCAAGAT
TAATACTGCTGGCCTCGATATTTCGGATATCCCGTTTTAA

Upstream 100 bases:

>100_bases
GTGTGCAATTGCAGTGCGAGCACATCACCAATGGTATGTTAGTTCGTGGCAATCACACGGGCGGTTTTATGATTTGTGAT
ACACAGGAGTTTGCAGCGTT

Downstream 100 bases:

>100_bases
TGGCAAAGCTTACATTTACCCCTCAAGAACAACGTGCAGCCACTAAAGCTTGTTTAAGCTTTGGTGGTTTGTGCGTATTC
CCTCAAAAGCCAAAAGCGAT

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNIVDDRVKPRISSVKDVYEQLFSLARLLKNKDSLLPIIGFEHFCFTSDTLSSHCCDYFDSLSDPEFCREIIYKVDNIVN
PSEPHVSIQIQLMPLAERLLLHKMFKINTAGLDISDIPF

Sequences:

>Translated_119_residues
MNIVDDRVKPRISSVKDVYEQLFSLARLLKNKDSLLPIIGFEHFCFTSDTLSSHCCDYFDSLSDPEFCREIIYKVDNIVN
PSEPHVSIQIQLMPLAERLLLHKMFKINTAGLDISDIPF
>Mature_119_residues
MNIVDDRVKPRISSVKDVYEQLFSLARLLKNKDSLLPIIGFEHFCFTSDTLSSHCCDYFDSLSDPEFCREIIYKVDNIVN
PSEPHVSIQIQLMPLAERLLLHKMFKINTAGLDISDIPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13705; Mature: 13705

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVDDRVKPRISSVKDVYEQLFSLARLLKNKDSLLPIIGFEHFCFTSDTLSSHCCDYFD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHH
SLSDPEFCREIIYKVDNIVNPSEPHVSIQIQLMPLAERLLLHKMFKINTAGLDISDIPF
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNIVDDRVKPRISSVKDVYEQLFSLARLLKNKDSLLPIIGFEHFCFTSDTLSSHCCDYFD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHH
SLSDPEFCREIIYKVDNIVNPSEPHVSIQIQLMPLAERLLLHKMFKINTAGLDISDIPF
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA