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The map label for this gene is motA [H]

Identifier: 209694504

GI number: 209694504

Start: 1033690

End: 1034454

Strand: Direct

Name: motA [H]

Synonym: VSAL_I0936

Alternate gene names: 209694504

Gene position: 1033690-1034454 (Clockwise)

Preceding gene: 209694500

Following gene: 209694505

Centisome position: 31.09

GC content: 38.56

Gene sequence:

>765_bases
GTGGATTTAGCAACGTTAATAGGCTTAGTTGGTAGTTTTGCATTTATCATCATGGCAATGGTACTAGCGGGTGGCCTAGC
CATCTTTATGGATGTTACATCAGTTCTTATTGTATTTGGTGGTTCAATATTTGTTGTACTAATGAAGTTTACGGTAGGTC
AATTTTTTGGCGCAGGTAAAATTGCGGCTAAAGCTTTTATTTTTAAAACCGATGAACCCGTTGATTTAATTGTCACCATT
GTTGAAATGGCTGATGCTGCTCGAAAGGGAGGTTTTCTTGCACTAGAAGAAAAAGAGATCAGCAATTCATTTATGCAAAA
AGGCATTGATTTATTGGTTGATGGTCATGATGCGGAAGTCGTTAAAGCGACACTGCAAAAAGACATCGCATTGACGAATG
AGCGACATGAAAAAGGCATTGGTGTTTTTACCGCCTTTGGTGATGTAGCACCTGCAATGGGTATGATCGGTACACTAATC
GGCTTGGTCGGTATGTTATCAAACATGGATGATCCTAAGTCAATTGGTCCTGCCATGGCTGTCGCACTTTTAACGACGCT
TTATGGTTCAGTTATTTCAAATATGATTGCATTCCCTATTGCACATAAATTGGAATTACGTAAAGAACAAGAAAAACTAA
ACCGTCGTTTGATCCTTGATGGCATTCTTGCTATTCAAGATGGTCAAAATCCTCGTGTTATTGATAGTTATCTACGTAAT
TATTTAAACGAGAAAAAACGCGTTGTTGATACTGGCGAAGAATAG

Upstream 100 bases:

>100_bases
GATATAAAAAGAAGCGGTAAAAATCTGCCATATATTAGTGGCTTAATTTTTGCTTAGCACACTATACATAAACACAAGCA
GCAAGATAGGGGAGCGCTCT

Downstream 100 bases:

>100_bases
ACTAGGAGCTCATGATGGAAGATGAAGATAAGTGTAAATGTCCTCCTGGTTCCCCTATATGGATGGCAATATTTGCGGAT
TTAGCAACGCTATTGATGTG

Product: flagellar motor protein PomA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDVTSVLIVFGGSIFVVLMKFTVGQFFGAGKIAAKAFIFKTDEPVDLIVTI
VEMADAARKGGFLALEEKEISNSFMQKGIDLLVDGHDAEVVKATLQKDIALTNERHEKGIGVFTAFGDVAPAMGMIGTLI
GLVGMLSNMDDPKSIGPAMAVALLTTLYGSVISNMIAFPIAHKLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRN
YLNEKKRVVDTGEE

Sequences:

>Translated_254_residues
MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDVTSVLIVFGGSIFVVLMKFTVGQFFGAGKIAAKAFIFKTDEPVDLIVTI
VEMADAARKGGFLALEEKEISNSFMQKGIDLLVDGHDAEVVKATLQKDIALTNERHEKGIGVFTAFGDVAPAMGMIGTLI
GLVGMLSNMDDPKSIGPAMAVALLTTLYGSVISNMIAFPIAHKLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRN
YLNEKKRVVDTGEE
>Mature_254_residues
MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDVTSVLIVFGGSIFVVLMKFTVGQFFGAGKIAAKAFIFKTDEPVDLIVTI
VEMADAARKGGFLALEEKEISNSFMQKGIDLLVDGHDAEVVKATLQKDIALTNERHEKGIGVFTAFGDVAPAMGMIGTLI
GLVGMLSNMDDPKSIGPAMAVALLTTLYGSVISNMIAFPIAHKLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRN
YLNEKKRVVDTGEE

Specific function: PomA and PomB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi- pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 27399; Mature: 27399

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDVTSVLIVFGGSIFVVLMKFTVGQFFGAGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
IAAKAFIFKTDEPVDLIVTIVEMADAARKGGFLALEEKEISNSFMQKGIDLLVDGHDAEV
HHHHHHEEECCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCEEECCCHHHH
VKATLQKDIALTNERHEKGIGVFTAFGDVAPAMGMIGTLIGLVGMLSNMDDPKSIGPAMA
HHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VALLTTLYGSVISNMIAFPIAHKLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
YLNEKKRVVDTGEE
HHHHHHHHHCCCCC
>Mature Secondary Structure
MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDVTSVLIVFGGSIFVVLMKFTVGQFFGAGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
IAAKAFIFKTDEPVDLIVTIVEMADAARKGGFLALEEKEISNSFMQKGIDLLVDGHDAEV
HHHHHHEEECCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCEEECCCHHHH
VKATLQKDIALTNERHEKGIGVFTAFGDVAPAMGMIGTLIGLVGMLSNMDDPKSIGPAMA
HHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VALLTTLYGSVISNMIAFPIAHKLELRKEQEKLNRRLILDGILAIQDGQNPRVIDSYLRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHH
YLNEKKRVVDTGEE
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9260952 [H]