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The map label for this gene is yeaY [C]

Identifier: 209694479

GI number: 209694479

Start: 1008683

End: 1009240

Strand: Reverse

Name: yeaY [C]

Synonym: VSAL_I0908

Alternate gene names: 209694479

Gene position: 1009240-1008683 (Counterclockwise)

Preceding gene: 209694480

Following gene: 209694478

Centisome position: 30.35

GC content: 39.43

Gene sequence:

>558_bases
GTGATTATGAAACGTTCATTATTTTTATTATGTGCTTTGTTTTTAGCTGGGTGTAGTTCTTTACCGACCGAGCTAGAGTC
AAACCAAGAAAATACGATTGTTACCTATACGCCATTTTCTGATGCGTCGGAATCAGGAAGCGTGGTTGCTGTTCGTTTAG
GGGGAGTGATTGCTCGTATTGATAATCAAGCAGAAAAAACTCGAATTGAAGTCGTTAACCTACCGATCTCATCGGCTGGA
AAACCCGATATATCAGAAGAACCGAATGGACGATTTGTTGTTTATATGGATGGTTTTGTTGATCTAATCGCTTACGCGAA
GGGACGACTTATTACTGTGTTAGGAAAAACAGCATCGATTGAAAAAGGGAATGTTGGTGACTATGAATATTCATTTCCTG
TGATTAATGGCAGTGCACTGCATTTATGGCAAATTCAAGAATACGTAGTAACGAATGATTTTGATATGGATTATATGCCA
TGTCGAGGAACGCGCTGTATGTATCAACGCAGTCATATTGATACTCGTCGTGGCAAAGTCGTTCAGGAAGTTCAATAA

Upstream 100 bases:

>100_bases
TGCGATGGAAGAATACATGGATATCATGTTGCAGAAACGTCGAGACGAACTTGCTCAATTAGTGGGTGTCGATCTTTATA
TCTAAATTAATAAGGAGAAA

Downstream 100 bases:

>100_bases
GCGATTATGCACGCATTTCATCAATATGACCTATCGCTTCATCACGGTTCGTTAGCGGTAATAGAGCTTGGACCTAACAA
TGCCGATAATGTAGTTTTAT

Product: outer membrane lipoprotein, Slp family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MIMKRSLFLLCALFLAGCSSLPTELESNQENTIVTYTPFSDASESGSVVAVRLGGVIARIDNQAEKTRIEVVNLPISSAG
KPDISEEPNGRFVVYMDGFVDLIAYAKGRLITVLGKTASIEKGNVGDYEYSFPVINGSALHLWQIQEYVVTNDFDMDYMP
CRGTRCMYQRSHIDTRRGKVVQEVQ

Sequences:

>Translated_185_residues
MIMKRSLFLLCALFLAGCSSLPTELESNQENTIVTYTPFSDASESGSVVAVRLGGVIARIDNQAEKTRIEVVNLPISSAG
KPDISEEPNGRFVVYMDGFVDLIAYAKGRLITVLGKTASIEKGNVGDYEYSFPVINGSALHLWQIQEYVVTNDFDMDYMP
CRGTRCMYQRSHIDTRRGKVVQEVQ
>Mature_185_residues
MIMKRSLFLLCALFLAGCSSLPTELESNQENTIVTYTPFSDASESGSVVAVRLGGVIARIDNQAEKTRIEVVNLPISSAG
KPDISEEPNGRFVVYMDGFVDLIAYAKGRLITVLGKTASIEKGNVGDYEYSFPVINGSALHLWQIQEYVVTNDFDMDYMP
CRGTRCMYQRSHIDTRRGKVVQEVQ

Specific function: Unknown

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788108, Length=156, Percent_Identity=25.6410256410256, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI87082278, Length=159, Percent_Identity=28.3018867924528, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 20557; Mature: 20557

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKRSLFLLCALFLAGCSSLPTELESNQENTIVTYTPFSDASESGSVVAVRLGGVIARI
CCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEC
DNQAEKTRIEVVNLPISSAGKPDISEEPNGRFVVYMDGFVDLIAYAKGRLITVLGKTASI
CCCCHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCEEEEECCCCCC
EKGNVGDYEYSFPVINGSALHLWQIQEYVVTNDFDMDYMPCRGTRCMYQRSHIDTRRGKV
CCCCCCCEEEECEEECCCEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCE
VQEVQ
EECCC
>Mature Secondary Structure
MIMKRSLFLLCALFLAGCSSLPTELESNQENTIVTYTPFSDASESGSVVAVRLGGVIARI
CCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEC
DNQAEKTRIEVVNLPISSAGKPDISEEPNGRFVVYMDGFVDLIAYAKGRLITVLGKTASI
CCCCHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCEEEEECCCCCC
EKGNVGDYEYSFPVINGSALHLWQIQEYVVTNDFDMDYMPCRGTRCMYQRSHIDTRRGKV
CCCCCCCEEEECEEECCCEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCE
VQEVQ
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]