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The map label for this gene is yejB [H]

Identifier: 209694447

GI number: 209694447

Start: 972806

End: 973834

Strand: Reverse

Name: yejB [H]

Synonym: VSAL_I0871

Alternate gene names: 209694447

Gene position: 973834-972806 (Counterclockwise)

Preceding gene: 209694448

Following gene: 209694446

Centisome position: 29.29

GC content: 40.43

Gene sequence:

>1029_bases
ATGATATCTTATTTATTTAGACGGCTTTTATTGGTTGTCCCTACTTTCATCGGTATTACCTTACTCATTTTTGCGCTAAC
CCGATTTGTGCCTGGTGGACCAGTAGAAAGAATGCTGCTGAGTTTACAAATGCAAGGGAGTTCTGAAACTGGGGGAACCA
GCAGCGTTACTGATGGAAATAATGCATTATCTGAAGAGCAAATCGCAGAACTTAACGCCTTTTATGGATTAGATAAGCCC
GTGTTTGAAGCTTATTATGATTGGTTAACAAAATTGGTCGTTCTTGATCTCGGTGAATCCACCCGCTATTACGAACCCGT
ATGGGACATGATCTCTGAACGATTACCCGTGTCTTTATTTTATGGAGGAATGACCTTTTTACTCAGTTACCTTATTTCAA
TTCCTCTGGGTTACTTTAAAGCCTTAAAGCACGGTTCCATCCTCGATTCTATGTCCTCTGTCGCTATTTTTGTTGGCTTT
TCTTTGCCCGGTTATGTCATTGGCGTTTTCTTAATTAGTTTATTTAGTTATCAAATGGAGTGGTTCCCGATGGGGGGATT
TGTCAGTGATGATTTTGATGACTACGGTGCGATAGAACAAATAAAAGACATTATGTGGCATGCGGTTTTGCCTCTGTTTT
GTTATCTGATTGGCGATTTTGCATTGCTTACAATGACGATGAAAAACAATTTGATGGAAAATTTGACGGCCGATTATGTA
AGAACGGCCATTGCAAAAGGGTTGCCATTTAAAACGGCCGTACGTAAACACGCATTAAGAAACAGTCTAATTCCGGTCGC
GAGTCATTTTGGTAATTCGTTGATGTTTTTTATGACGGGATCATTTTTGATTGAGGTGATATTTAATATTGATGGTATTG
GGTTGCTGGGTTATGAAGCGATCATGGAGCGAGATTACCCGGTTGTGATGGGGTTGTTCGCTATTAACGCAATGATGCTG
ATGATAGGGAATATTTTATCTGATGTGTGTGTGGCGGTGGTTGATCCTCGCGTTAAGTTTGGAGCCTAA

Upstream 100 bases:

>100_bases
ATTGTGATTCTCTATTTATTGAGCTAACTTAATAAAACTATTATAAAAAATAATGATAAGCAGCGGAGTCTGCGCCTTGG
ACATGGAGTACTAATCACGG

Downstream 100 bases:

>100_bases
CTATGTCGTCTATCTTAAAAGTAAGTCCATTAACGCAGAAAAAAATACAGCGCTTTAAAGCGATAAAACGCAGTTATTGG
TCTTTCATTATTCTGCTCTT

Product: inner membrane ABC transporter permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MISYLFRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQGSSETGGTSSVTDGNNALSEEQIAELNAFYGLDKP
VFEAYYDWLTKLVVLDLGESTRYYEPVWDMISERLPVSLFYGGMTFLLSYLISIPLGYFKALKHGSILDSMSSVAIFVGF
SLPGYVIGVFLISLFSYQMEWFPMGGFVSDDFDDYGAIEQIKDIMWHAVLPLFCYLIGDFALLTMTMKNNLMENLTADYV
RTAIAKGLPFKTAVRKHALRNSLIPVASHFGNSLMFFMTGSFLIEVIFNIDGIGLLGYEAIMERDYPVVMGLFAINAMML
MIGNILSDVCVAVVDPRVKFGA

Sequences:

>Translated_342_residues
MISYLFRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQGSSETGGTSSVTDGNNALSEEQIAELNAFYGLDKP
VFEAYYDWLTKLVVLDLGESTRYYEPVWDMISERLPVSLFYGGMTFLLSYLISIPLGYFKALKHGSILDSMSSVAIFVGF
SLPGYVIGVFLISLFSYQMEWFPMGGFVSDDFDDYGAIEQIKDIMWHAVLPLFCYLIGDFALLTMTMKNNLMENLTADYV
RTAIAKGLPFKTAVRKHALRNSLIPVASHFGNSLMFFMTGSFLIEVIFNIDGIGLLGYEAIMERDYPVVMGLFAINAMML
MIGNILSDVCVAVVDPRVKFGA
>Mature_342_residues
MISYLFRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQGSSETGGTSSVTDGNNALSEEQIAELNAFYGLDKP
VFEAYYDWLTKLVVLDLGESTRYYEPVWDMISERLPVSLFYGGMTFLLSYLISIPLGYFKALKHGSILDSMSSVAIFVGF
SLPGYVIGVFLISLFSYQMEWFPMGGFVSDDFDDYGAIEQIKDIMWHAVLPLFCYLIGDFALLTMTMKNNLMENLTADYV
RTAIAKGLPFKTAVRKHALRNSLIPVASHFGNSLMFFMTGSFLIEVIFNIDGIGLLGYEAIMERDYPVVMGLFAINAMML
MIGNILSDVCVAVVDPRVKFGA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=361, Percent_Identity=37.3961218836565, Blast_Score=237, Evalue=6e-64,
Organism=Escherichia coli, GI1789965, Length=355, Percent_Identity=32.6760563380282, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1787497, Length=341, Percent_Identity=27.2727272727273, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1787053, Length=341, Percent_Identity=26.099706744868, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1789888, Length=340, Percent_Identity=27.0588235294118, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1787761, Length=354, Percent_Identity=26.271186440678, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1787550, Length=276, Percent_Identity=22.463768115942, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38148; Mature: 38148

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISYLFRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQGSSETGGTSSVTDGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
NALSEEQIAELNAFYGLDKPVFEAYYDWLTKLVVLDLGESTRYYEPVWDMISERLPVSLF
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHH
YGGMTFLLSYLISIPLGYFKALKHGSILDSMSSVAIFVGFSLPGYVIGVFLISLFSYQME
HCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
WFPMGGFVSDDFDDYGAIEQIKDIMWHAVLPLFCYLIGDFALLTMTMKNNLMENLTADYV
HEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTAIAKGLPFKTAVRKHALRNSLIPVASHFGNSLMFFMTGSFLIEVIFNIDGIGLLGYEA
HHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IMERDYPVVMGLFAINAMMLMIGNILSDVCVAVVDPRVKFGA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MISYLFRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQGSSETGGTSSVTDGN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
NALSEEQIAELNAFYGLDKPVFEAYYDWLTKLVVLDLGESTRYYEPVWDMISERLPVSLF
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHH
YGGMTFLLSYLISIPLGYFKALKHGSILDSMSSVAIFVGFSLPGYVIGVFLISLFSYQME
HCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
WFPMGGFVSDDFDDYGAIEQIKDIMWHAVLPLFCYLIGDFALLTMTMKNNLMENLTADYV
HEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTAIAKGLPFKTAVRKHALRNSLIPVASHFGNSLMFFMTGSFLIEVIFNIDGIGLLGYEA
HHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IMERDYPVVMGLFAINAMMLMIGNILSDVCVAVVDPRVKFGA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]