Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

Click here to switch to the map view.

The map label for this gene is zapB

Identifier: 209693894

GI number: 209693894

Start: 336692

End: 336934

Strand: Direct

Name: zapB

Synonym: VSAL_I0288

Alternate gene names: 209693894

Gene position: 336692-336934 (Clockwise)

Preceding gene: 209693892

Following gene: 209693895

Centisome position: 10.13

GC content: 38.68

Gene sequence:

>243_bases
ATGTCTTTAGAAATATTAGAACAACTAGAAGCTAAAGTTCAGATGGCAGTAGATACAATCGCACTGCTACAAATGGAAGT
TGAAGAATTAAAAGAAACGAACGCAGAGCTAACTCAAAATCTTGAGCAAGCAAATAACGGTCGTTCTGAAGTTGAGCAAG
AAGCTCAGAAAGCACGTGATGAGCAAGCTAGTTTTGAAGCTCGCATCCGTGGTTTATTAGGTAAGATGGAAGAAGTAGAG
TAA

Upstream 100 bases:

>100_bases
ATGGCAGAATTGCAATTGCTGAGTAGAATAGAAAACAAGTTTCGCAGGGAATCAATAATGCCCCTGCATTTCAATTAGAA
TTACAGTTAAGGTGGCAGGA

Downstream 100 bases:

>100_bases
TTCTATTTTTTCGTCATAGCTTTCATTATTTCTGCGTTGTCGATGCTCACTTACTATCGTAAGCGCGGTGTTTTCACTTT
GAACTAATGAAATCTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MSLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQANNGRSEVEQEAQKARDEQASFEARIRGLLGKMEEVE

Sequences:

>Translated_80_residues
MSLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQANNGRSEVEQEAQKARDEQASFEARIRGLLGKMEEVE
>Mature_79_residues
SLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQANNGRSEVEQEAQKARDEQASFEARIRGLLGKMEEVE

Specific function: Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. It

COG id: COG3074

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the septum at mid-cell, in a FtsZ-like pattern (By similarity)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ZapB family

Homologues:

Organism=Escherichia coli, GI1790363, Length=79, Percent_Identity=53.1645569620253, Blast_Score=82, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ZAPB_ALISL (B6EPL9)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002261822.1
- GeneID:   6988603
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I0288
- HOGENOM:   HBG681677
- OMA:   VWQERLR
- ProtClustDB:   CLSK2395980
- GO:   GO:0005737
- HAMAP:   MF_01196
- InterPro:   IPR009252

Pfam domain/function: PF06005 DUF904

EC number: NA

Molecular weight: Translated: 9076; Mature: 8945

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQANNGRSEVEQEAQKARD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EQASFEARIRGLLGKMEEVE
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQANNGRSEVEQEAQKARD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EQASFEARIRGLLGKMEEVE
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA