| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is zapB
Identifier: 209693894
GI number: 209693894
Start: 336692
End: 336934
Strand: Direct
Name: zapB
Synonym: VSAL_I0288
Alternate gene names: 209693894
Gene position: 336692-336934 (Clockwise)
Preceding gene: 209693892
Following gene: 209693895
Centisome position: 10.13
GC content: 38.68
Gene sequence:
>243_bases ATGTCTTTAGAAATATTAGAACAACTAGAAGCTAAAGTTCAGATGGCAGTAGATACAATCGCACTGCTACAAATGGAAGT TGAAGAATTAAAAGAAACGAACGCAGAGCTAACTCAAAATCTTGAGCAAGCAAATAACGGTCGTTCTGAAGTTGAGCAAG AAGCTCAGAAAGCACGTGATGAGCAAGCTAGTTTTGAAGCTCGCATCCGTGGTTTATTAGGTAAGATGGAAGAAGTAGAG TAA
Upstream 100 bases:
>100_bases ATGGCAGAATTGCAATTGCTGAGTAGAATAGAAAACAAGTTTCGCAGGGAATCAATAATGCCCCTGCATTTCAATTAGAA TTACAGTTAAGGTGGCAGGA
Downstream 100 bases:
>100_bases TTCTATTTTTTCGTCATAGCTTTCATTATTTCTGCGTTGTCGATGCTCACTTACTATCGTAAGCGCGGTGTTTTCACTTT GAACTAATGAAATCTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQANNGRSEVEQEAQKARDEQASFEARIRGLLGKMEEVE
Sequences:
>Translated_80_residues MSLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQANNGRSEVEQEAQKARDEQASFEARIRGLLGKMEEVE >Mature_79_residues SLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQANNGRSEVEQEAQKARDEQASFEARIRGLLGKMEEVE
Specific function: Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. It
COG id: COG3074
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm. Note=Localizes to the septum at mid-cell, in a FtsZ-like pattern (By similarity)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZapB family
Homologues:
Organism=Escherichia coli, GI1790363, Length=79, Percent_Identity=53.1645569620253, Blast_Score=82, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ZAPB_ALISL (B6EPL9)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002261822.1 - GeneID: 6988603 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I0288 - HOGENOM: HBG681677 - OMA: VWQERLR - ProtClustDB: CLSK2395980 - GO: GO:0005737 - HAMAP: MF_01196 - InterPro: IPR009252
Pfam domain/function: PF06005 DUF904
EC number: NA
Molecular weight: Translated: 9076; Mature: 8945
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQANNGRSEVEQEAQKARD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EQASFEARIRGLLGKMEEVE HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQANNGRSEVEQEAQKARD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EQASFEARIRGLLGKMEEVE HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA