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The map label for this gene is yihI [H]

Identifier: 209693843

GI number: 209693843

Start: 278025

End: 278573

Strand: Direct

Name: yihI [H]

Synonym: VSAL_I0231

Alternate gene names: 209693843

Gene position: 278025-278573 (Clockwise)

Preceding gene: 209693842

Following gene: 209693844

Centisome position: 8.36

GC content: 39.89

Gene sequence:

>549_bases
ATGAGCCGTACTAAAAAAGCCCGTACTCCGGGAATGGCGAGTGAGCCAGTAGTTGTAACACGTAACCGTACCGATCGTGA
CGTAGACAGTCGTGAAATTAAGCGTAAAAAGAAACGTAAAGGCCTAAAACCTGGAGCTCGTAACGTTGAAAGCGATTCAG
AGAAAGCACGTCGTTTTTCTCAGAATAAAGATCCTCGTATTGGCAGTAAAAAACCAATTCAACTTGTTGTTGAAGAGAAG
AAGAAATCAAGCAAGCAAGAGCGTCGTTTAACTAATGAGCAAGAATTGGCTCAATTAGAAAATGATGCGCAATTGATGGT
TCTTCTTGATCGTATCGATAATGGTGAAAACCTAGGTATGGGTCTGCAAAAATACGTAGATGAAAAATTAGCACGTATTG
AGCACTTAATGGGTCGTTTAGGCTTATTAGAAGACGAAGAGACAGAAGAAGAAATTGCTGAATTCCCTGAGTTCGCGGCG
CCTAAAACAAAAAGCGACGATGACCTATTAGCTGAATTTGATAATTTCAACATGGATGATTTTAAATAA

Upstream 100 bases:

>100_bases
GCTTTTTCAGCAAAGACACATTTGAGTTTGTAGCAAAGCGCTATCAACTTGATATGGAGTTTGTTGGAGAGGATGTCATT
TTACTGAGGAAAACCCAGTA

Downstream 100 bases:

>100_bases
TTATGACTACAGTAACCCTGTTAGCACTGCTTGGTGGTGCAATTATTCTTGCGTTAGCGGGCTACGCTAGCAGCTTACTG
ATGAAGTTGAAAAAGCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSRTKKARTPGMASEPVVVTRNRTDRDVDSREIKRKKKRKGLKPGARNVESDSEKARRFSQNKDPRIGSKKPIQLVVEEK
KKSSKQERRLTNEQELAQLENDAQLMVLLDRIDNGENLGMGLQKYVDEKLARIEHLMGRLGLLEDEETEEEIAEFPEFAA
PKTKSDDDLLAEFDNFNMDDFK

Sequences:

>Translated_182_residues
MSRTKKARTPGMASEPVVVTRNRTDRDVDSREIKRKKKRKGLKPGARNVESDSEKARRFSQNKDPRIGSKKPIQLVVEEK
KKSSKQERRLTNEQELAQLENDAQLMVLLDRIDNGENLGMGLQKYVDEKLARIEHLMGRLGLLEDEETEEEIAEFPEFAA
PKTKSDDDLLAEFDNFNMDDFK
>Mature_181_residues
SRTKKARTPGMASEPVVVTRNRTDRDVDSREIKRKKKRKGLKPGARNVESDSEKARRFSQNKDPRIGSKKPIQLVVEEKK
KSSKQERRLTNEQELAQLENDAQLMVLLDRIDNGENLGMGLQKYVDEKLARIEHLMGRLGLLEDEETEEEIAEFPEFAAP
KTKSDDDLLAEFDNFNMDDFK

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis [H]

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family [H]

Homologues:

Organism=Escherichia coli, GI1790297, Length=108, Percent_Identity=42.5925925925926, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007336 [H]

Pfam domain/function: PF04220 DUF414 [H]

EC number: NA

Molecular weight: Translated: 20990; Mature: 20859

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTKKARTPGMASEPVVVTRNRTDRDVDSREIKRKKKRKGLKPGARNVESDSEKARRFS
CCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
QNKDPRIGSKKPIQLVVEEKKKSSKQERRLTNEQELAQLENDAQLMVLLDRIDNGENLGM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCH
GLQKYVDEKLARIEHLMGRLGLLEDEETEEEIAEFPEFAAPKTKSDDDLLAEFDNFNMDD
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHCCCCCCCCHHHHHHHCCCCCCC
FK
CC
>Mature Secondary Structure 
SRTKKARTPGMASEPVVVTRNRTDRDVDSREIKRKKKRKGLKPGARNVESDSEKARRFS
CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
QNKDPRIGSKKPIQLVVEEKKKSSKQERRLTNEQELAQLENDAQLMVLLDRIDNGENLGM
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCH
GLQKYVDEKLARIEHLMGRLGLLEDEETEEEIAEFPEFAAPKTKSDDDLLAEFDNFNMDD
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHCCCCCCCCHHHHHHHCCCCCCC
FK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA