Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209693770

Identifier: 209693770

GI number: 209693770

Start: 188701

End: 189723

Strand: Direct

Name: 209693770

Synonym: VSAL_I0149

Alternate gene names: NA

Gene position: 188701-189723 (Clockwise)

Preceding gene: 209693769

Following gene: 209693771

Centisome position: 5.67

GC content: 41.74

Gene sequence:

>1023_bases
ATGCGACAAGGACTGTTAGCATCAATCCTCCTTTCTACTAGTTTGATGGTCGGTGTAGTATCCGCCTCTGAAATTCAGCC
TACATTTGCGAAGAGCTTATTGGTTGATGCACAACTAAAAAAGAAAGTGGATGAATTACATCAATACCTTATTGATGGTG
ACATTATTACACTCAATTTCTCTCTCAATCGTTTGTCTATGCCTCAGCAAGAAGCCGTACGCTTTATGTTGCTCCAACAG
ATAGAGCAACAGAAACTCATTTTGGATCCAAAAGGAACGATTTGGTTAAGAGCGCAATTAACGAAACACCCAACCTATAT
GATTAAAGAGCAAGGTGATGGGTATGTTGTGACTAAATTGGCGTTTGATTATTCTAGTATTGCTTCTCGTGTGCTAAACC
AAATGTCGAAAGATCAACAAGTCTTAGATTTTATTCTTGCTGCAGAAGAGCACAGCTTAGTACTGTCTGAATGGCTCGTG
GGTGAACCCCATGAGGTGCGCGTACGTCAATCCATCGTTTTAGCTGAGTTAGACAGCTTAACCCCTGAAGCGCTTGCCTA
TTTATCTGGGCAAATAGACGATGGACCGATTTCTGTCTGGTTACCCACCACGGAAATTGTCGTTCGTTTAGCTCCGTTAT
CGCAAGATCCTGCCGTATATAAAATTTTATGGAAAATGAGAACAGATCAACACAGTATTTCAGAACTAACTCGTTTATCT
CGTTTATCTCGTTTATCTCGTTTATCTCGTTTAGCGCCGGACAAGTTTGCAACCGATCAACTGATTGCGGCAACGAGTAA
TCCTTCACTAAAACAAAGCGCGTTTGCTTCTCTAGCGCAGCTGCATCCTTTGCCTTCAGATGTTGAGCAGTTCTTATTGG
CTAAGCTCAGTCATATCCAAGATGGTGGCGCTGTCGCACTTCATTTAGCCAATTATGGGCATGGTTCTTGGCTAGAAAGT
TTATTGAATAGTCGCAATAAAGTTCGTAAGCAACACGTAAGATTTGCGTTATCACAACGTTGA

Upstream 100 bases:

>100_bases
GCGCTTTTTTGTTGATTAAATGTTAATTTGATCGCATTATGGTTTGTACTAAACTTGATAAGGATAATTCAGTTTAGTTA
TTTTTTAAGGAGCTCCCTCT

Downstream 100 bases:

>100_bases
GTTTGTTAAGCATTACTCAATAATACGCTTGAAGTAGGTTGGGGATATGCACTTGTTTGGGTATAATCTATTCAAACTTC
ATGACAGTAGATAGCGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRQGLLASILLSTSLMVGVVSASEIQPTFAKSLLVDAQLKKKVDELHQYLIDGDIITLNFSLNRLSMPQQEAVRFMLLQQ
IEQQKLILDPKGTIWLRAQLTKHPTYMIKEQGDGYVVTKLAFDYSSIASRVLNQMSKDQQVLDFILAAEEHSLVLSEWLV
GEPHEVRVRQSIVLAELDSLTPEALAYLSGQIDDGPISVWLPTTEIVVRLAPLSQDPAVYKILWKMRTDQHSISELTRLS
RLSRLSRLSRLAPDKFATDQLIAATSNPSLKQSAFASLAQLHPLPSDVEQFLLAKLSHIQDGGAVALHLANYGHGSWLES
LLNSRNKVRKQHVRFALSQR

Sequences:

>Translated_340_residues
MRQGLLASILLSTSLMVGVVSASEIQPTFAKSLLVDAQLKKKVDELHQYLIDGDIITLNFSLNRLSMPQQEAVRFMLLQQ
IEQQKLILDPKGTIWLRAQLTKHPTYMIKEQGDGYVVTKLAFDYSSIASRVLNQMSKDQQVLDFILAAEEHSLVLSEWLV
GEPHEVRVRQSIVLAELDSLTPEALAYLSGQIDDGPISVWLPTTEIVVRLAPLSQDPAVYKILWKMRTDQHSISELTRLS
RLSRLSRLSRLAPDKFATDQLIAATSNPSLKQSAFASLAQLHPLPSDVEQFLLAKLSHIQDGGAVALHLANYGHGSWLES
LLNSRNKVRKQHVRFALSQR
>Mature_340_residues
MRQGLLASILLSTSLMVGVVSASEIQPTFAKSLLVDAQLKKKVDELHQYLIDGDIITLNFSLNRLSMPQQEAVRFMLLQQ
IEQQKLILDPKGTIWLRAQLTKHPTYMIKEQGDGYVVTKLAFDYSSIASRVLNQMSKDQQVLDFILAAEEHSLVLSEWLV
GEPHEVRVRQSIVLAELDSLTPEALAYLSGQIDDGPISVWLPTTEIVVRLAPLSQDPAVYKILWKMRTDQHSISELTRLS
RLSRLSRLSRLAPDKFATDQLIAATSNPSLKQSAFASLAQLHPLPSDVEQFLLAKLSHIQDGGAVALHLANYGHGSWLES
LLNSRNKVRKQHVRFALSQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38102; Mature: 38102

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQGLLASILLSTSLMVGVVSASEIQPTFAKSLLVDAQLKKKVDELHQYLIDGDIITLNF
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
SLNRLSMPQQEAVRFMLLQQIEQQKLILDPKGTIWLRAQLTKHPTYMIKEQGDGYVVTKL
ECCCCCCCHHHHHHHHHHHHHHHHCEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEEE
AFDYSSIASRVLNQMSKDQQVLDFILAAEEHSLVLSEWLVGEPHEVRVRQSIVLAELDSL
HHCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
TPEALAYLSGQIDDGPISVWLPTTEIVVRLAPLSQDPAVYKILWKMRTDQHSISELTRLS
CHHHHHHHCCCCCCCCEEEEECHHHHHEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
RLSRLSRLSRLAPDKFATDQLIAATSNPSLKQSAFASLAQLHPLPSDVEQFLLAKLSHIQ
HHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
DGGAVALHLANYGHGSWLESLLNSRNKVRKQHVRFALSQR
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRQGLLASILLSTSLMVGVVSASEIQPTFAKSLLVDAQLKKKVDELHQYLIDGDIITLNF
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
SLNRLSMPQQEAVRFMLLQQIEQQKLILDPKGTIWLRAQLTKHPTYMIKEQGDGYVVTKL
ECCCCCCCHHHHHHHHHHHHHHHHCEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEEE
AFDYSSIASRVLNQMSKDQQVLDFILAAEEHSLVLSEWLVGEPHEVRVRQSIVLAELDSL
HHCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
TPEALAYLSGQIDDGPISVWLPTTEIVVRLAPLSQDPAVYKILWKMRTDQHSISELTRLS
CHHHHHHHCCCCCCCCEEEEECHHHHHEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
RLSRLSRLSRLAPDKFATDQLIAATSNPSLKQSAFASLAQLHPLPSDVEQFLLAKLSHIQ
HHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
DGGAVALHLANYGHGSWLESLLNSRNKVRKQHVRFALSQR
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA