| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is cyaB
Identifier: 209693657
GI number: 209693657
Start: 26437
End: 26988
Strand: Direct
Name: cyaB
Synonym: VSAL_I0024
Alternate gene names: NA
Gene position: 26437-26988 (Clockwise)
Preceding gene: 209693656
Following gene: 209693658
Centisome position: 0.8
GC content: 35.14
Gene sequence:
>552_bases ATGTCAGAACATTTTGAAGGTAAGTTTGAAGTAGAATTGAAATATAGGCTGAAGTCTAAATCTCAGTTTTTAACTATATT AAATTCAATGATGTACGAGGTCATGCTTGAAGATAACTTAGAATCTGATTGTTACTTTGATACTCCTGAACAAGTACTTT TGGCTGAAAATAAAAGCCTTTGTATTCGTGAAATGGAACCGTCTGGAATTAAACTTTGGATAGTCAAAGGACCAGAGGCT GACCATTGTGAAGCGACGAATATCACCGATACCAATAAAGCGAAAAGTATGCTTAATACAATGGGCTACCATGTTGTTTT AGCCATGAAGAAAACGCGTAGTATTTACTTTGTTGGTAAATTTCATATTACTATCGATAATCTTAATGGGTTAGGTGATT TTGCTGAATTTGCGATTATGACTGACGATGAAAGTCTACTTGAAAGTTATCGGTCTGAACTGATTGTTTTAGCAAGTAAG TTTGGCCTGAGTTCTACGGACTTAGAGCATCGTTCATACCGAAAAATGTACTCAGAAAGTCTTACGGTATAA
Upstream 100 bases:
>100_bases TGGAGTAATTCTACAGCCTCGTTATACCGTAATCGAACGTAGTTAACTGAAATCCGTGCTAATCTAGTCTTCTTTATCAT TTTAAGCAAGTAGTGATTCG
Downstream 100 bases:
>100_bases CAAGTGACTATGGTTCTTTATTTAACGTAAATCCCGTTCTACGAACCGCAAAGGCCGCTAAAATTTAGCGGTTTTTTTGT CGCTTGTGATCACGTTTTCA
Product: adenylate cyclase
Products: 3',5'-cyclic AMP; diphosphate
Alternate protein names: Adenylate Cyclase; Adenylate Cyclase CyaB
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSEHFEGKFEVELKYRLKSKSQFLTILNSMMYEVMLEDNLESDCYFDTPEQVLLAENKSLCIREMEPSGIKLWIVKGPEA DHCEATNITDTNKAKSMLNTMGYHVVLAMKKTRSIYFVGKFHITIDNLNGLGDFAEFAIMTDDESLLESYRSELIVLASK FGLSSTDLEHRSYRKMYSESLTV
Sequences:
>Translated_183_residues MSEHFEGKFEVELKYRLKSKSQFLTILNSMMYEVMLEDNLESDCYFDTPEQVLLAENKSLCIREMEPSGIKLWIVKGPEA DHCEATNITDTNKAKSMLNTMGYHVVLAMKKTRSIYFVGKFHITIDNLNGLGDFAEFAIMTDDESLLESYRSELIVLASK FGLSSTDLEHRSYRKMYSESLTV >Mature_182_residues SEHFEGKFEVELKYRLKSKSQFLTILNSMMYEVMLEDNLESDCYFDTPEQVLLAENKSLCIREMEPSGIKLWIVKGPEAD HCEATNITDTNKAKSMLNTMGYHVVLAMKKTRSIYFVGKFHITIDNLNGLGDFAEFAIMTDDESLLESYRSELIVLASKF GLSSTDLEHRSYRKMYSESLTV
Specific function: Unknown
COG id: COG1437
COG function: function code F; Adenylate cyclase, class 2 (thermophilic)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.6.1.1
Molecular weight: Translated: 21042; Mature: 20911
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHFEGKFEVELKYRLKSKSQFLTILNSMMYEVMLEDNLESDCYFDTPEQVLLAENKSL CCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCE CIREMEPSGIKLWIVKGPEADHCEATNITDTNKAKSMLNTMGYHVVLAMKKTRSIYFVGK EEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCEEEEEEE FHITIDNLNGLGDFAEFAIMTDDESLLESYRSELIVLASKFGLSSTDLEHRSYRKMYSES EEEEEECCCCCCCHHHEEEEECCHHHHHHHHHHEEEEEHHCCCCCCCCHHHHHHHHHHHH LTV CCC >Mature Secondary Structure SEHFEGKFEVELKYRLKSKSQFLTILNSMMYEVMLEDNLESDCYFDTPEQVLLAENKSL CCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECCCCE CIREMEPSGIKLWIVKGPEADHCEATNITDTNKAKSMLNTMGYHVVLAMKKTRSIYFVGK EEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEECCCEEEEEEE FHITIDNLNGLGDFAEFAIMTDDESLLESYRSELIVLASKFGLSSTDLEHRSYRKMYSES EEEEEECCCCCCCHHHEEEEECCHHHHHHHHHHEEEEEHHCCCCCCCCHHHHHHHHHHHH LTV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP
Specific reaction: ATP = 3',5'-cyclic AMP + diphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA