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The map label for this gene is groS1

Identifier: 209693651

GI number: 209693651

Start: 18902

End: 19189

Strand: Reverse

Name: groS1

Synonym: VSAL_I0018

Alternate gene names: 209693651

Gene position: 19189-18902 (Counterclockwise)

Preceding gene: 209693652

Following gene: 209693650

Centisome position: 0.58

GC content: 42.01

Gene sequence:

>288_bases
ATGAATATCCGTCCTTTACATGACCGTGTGATCGTTGAACGCCAAGAATCTGAATCAAAATCTGCAGGTGGCATTGTATT
AACAGGTTCAGCGGCTGAGAAATCAACTCGCGGTATTATTCTAGCTGTTGGCAATGGCCGCATCCTAGAGAATGGTTCTG
TACAGCCATTAGACGTAAAAGTAGGCGATTCAGTGATCTTCGCAGAAGGTAACATCAAAGCAGAGAAGATTGACGGTAAA
GAAGTGTTGATCATGTCTGAATACAACATTCTGGCTATTGTTGAATAA

Upstream 100 bases:

>100_bases
CATAAACCCTTGCAATCCCCCCCTAAAAACCCCATTAATAAACCAAAGCCAAATCATGGCACTTTATTCTTAAATGGAAC
ATTATCAGGAGATACGACCA

Downstream 100 bases:

>100_bases
TAAGCACTCGTTGAGTAATTCGTTTTTCGAACTTTGCTATTTTCGATACTAATAAGCGATATTAAGAAAAGAATTTAAAA
AGGAAATTAAAGATGGCTGC

Product: 10 kDa chaperonin 1

Products: NA

Alternate protein names: GroES protein; Protein Cpn10

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MNIRPLHDRVIVERQESESKSAGGIVLTGSAAEKSTRGIILAVGNGRILENGSVQPLDVKVGDSVIFAEGNIKAEKIDGK
EVLIMSEYNILAIVE

Sequences:

>Translated_95_residues
MNIRPLHDRVIVERQESESKSAGGIVLTGSAAEKSTRGIILAVGNGRILENGSVQPLDVKVGDSVIFAEGNIKAEKIDGK
EVLIMSEYNILAIVE
>Mature_95_residues
MNIRPLHDRVIVERQESESKSAGGIVLTGSAAEKSTRGIILAVGNGRILENGSVQPLDVKVGDSVIFAEGNIKAEKIDGK
EVLIMSEYNILAIVE

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family

Homologues:

Organism=Escherichia coli, GI1790585, Length=96, Percent_Identity=79.1666666666667, Blast_Score=144, Evalue=1e-36,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): CH10_ALISL (B6ENX1)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002261579.1
- GeneID:   6988625
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I0018
- HOGENOM:   HBG703377
- OMA:   RIVIQQV
- GO:   GO:0005737
- HAMAP:   MF_00580
- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032
- Gene3D:   G3DSA:2.30.33.40
- PANTHER:   PTHR10772
- PRINTS:   PR00297
- SMART:   SM00883

Pfam domain/function: PF00166 Cpn10; SSF50129 GroES_like

EC number: NA

Molecular weight: Translated: 10159; Mature: 10159

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRPLHDRVIVERQESESKSAGGIVLTGSAAEKSTRGIILAVGNGRILENGSVQPLDVK
CCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCCCCEEEEE
VGDSVIFAEGNIKAEKIDGKEVLIMSEYNILAIVE
ECCEEEEECCCEEEEEECCCEEEEEECCCEEEEEC
>Mature Secondary Structure
MNIRPLHDRVIVERQESESKSAGGIVLTGSAAEKSTRGIILAVGNGRILENGSVQPLDVK
CCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCCCCEEEEE
VGDSVIFAEGNIKAEKIDGKEVLIMSEYNILAIVE
ECCEEEEECCCEEEEEECCCEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA