Click here to switch to the map view.

The map label for this gene is rumA

Identifier: 207858223

GI number:

Start: 2993853

End: 2995148

Strand: Reverse

Name: rumA

Synonym: SEN2802

Alternate gene names: NA

Gene position: NA

Preceding gene: 207858225

Following gene: 207858222

Centisome position: NA

GC content: NA

Gene sequence:

>1296_bases
ATGGCGCAATTCTACTCTGCAAAACGGCGCGTGACGACGCGTCAGATCATAACCGTTAAAGTCAATGACCTCGATTCATT
TGGTCAGGGCGTAGCCCGTCATAACGGAAAAGCGCTGTTTATCCCCGGTTTATTGCCTGAGGAAAGCGCAGAAGTCATTA
TTACAGAAGATAAAAAGCAATTTGCCCGCGCACGCGTTTCGCGCCGTTTGAATGATAGCCCGGAACGAGAAACGCCGCGC
TGCCCGCATTTTGGCGTCTGCGGCGGTTGTCAGCAACAGCATGTCAGCATCGCCCTGCAACAACGCAGCAAAAGCGCGGC
GCTGGCGCGTTTGATGAAACACGAGGTGAATGACATCATCGCCGGCGCGCCCTGGGGTTATCGGCGTCGTGCGCGGTTAA
GTCTGAATTGCCCGCCGGATAAACCGCTGCAAATGGGATTTCGCAAAGCGGGTTCCAGCGATATCGTCAATGTCGAACAG
TGCCCTGTTTTGGCGCCCCAGCTTGCAGCATTGCTGCCCCGAATCAGGGCGTGTCTGGCGAGTTTACACGGCACCCGACA
TCTTGGGCATGTTGAGCTGGTACAGGCGGGAAGCGGTACGCTGATGATTCTGCGCCATACCGCGCCATTAAGTGCGGCGG
ATAAAGAAAAACTGGAACGCTTTTCGCATTCTGAGGGATTGTCTCTGTTTCTGGCGCCGTTTAGCGAGATACTGGAAACG
GTATCTGGCGAAGCGCCCTGGTATGATTCGCACGGCTTACGTTTAGCCTTCAGTCCGCGAGACTTTATTCAGGTTAATGA
GGCGGTAAACCAGCAAATGGTCGCCCGCGCGCTGGAGTGGCTTGATGTGCGCGCCGAGGATCGTGTCCTGGATCTGTTCT
GCGGAATGGGGAATTTTACGCTGCCGCTGGCAACGCGCGCGGCAAGCGTGATTGGGGTTGAGGGCGTTCCGGCGCTGGTA
GAAAAAGGCCGTGAAAACGCCATCCGCAATGGTTTACATAATGTGACATTCTTCCATGAGAACCTGGAGGAAGATGTCAC
GAAGCAGCCGTGGGCGAAAAACGGCTTTGACAAAGTCTTACTCGATCCTGCGCGTGCGGGGGCTACAGGAGTGATGCGAC
ATATTATAAAATTAAAACCTATTCGCATTGTTTATGTATCCTGTAACCCGGCGACGCTGGCGCGCGATAGTGAAGCGCTG
GTCAATGCGGGATATGAGGTTACGCGTTTAGCGATGCTCGACATGTTCCCGCACACAGGACATCTGGAATCAATGGTTCT
GTTCGAGCGCATGTAA

Upstream 100 bases:

>100_bases
GGATCAGAATCATCATGCGTGCGCGCAGGCTGTAGTTGGTCATGGAGTTCCGTTATGGGACAATTAGGGTCACACTGTTA
AATTGAGAAAAAGCTGGTCG

Downstream 100 bases:

>100_bases
TGATTACCGGCTTACCGACTTCGGTAGGCCTGGTCCCTTAAGGAGAGGACGATGGTCGCGGTAAGAAGTGCACATATTAA
TAAAGCTGGTGAATTTGATC

Product: 23S rRNA 5-methyluridine methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>431_residues
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPR
CPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQ
CPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILET
VSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALV
EKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEAL
VNAGYEVTRLAMLDMFPHTGHLESMVLFERM

Sequences:
NA

Specific function: NA

COG id: COG2265

COG function: function code J; SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA