| Definition | Borrelia recurrentis A1, complete genome. |
|---|---|
| Accession | NC_011244 |
| Length | 930,981 |
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The map label for this gene is rpoB
Identifier: 203287837
GI number:
Start: 422058
End: 425525
Strand: Reverse
Name: rpoB
Synonym: BRE_387
Alternate gene names: NA
Gene position: NA
Preceding gene: 203287838
Following gene: 203287836
Centisome position: NA
GC content: NA
Gene sequence:
>3468_bases ATGATAAAAAGGGTTCATCTAGGACAAGGAAAAGCCGAAGAAATCTTAAACTTACCTAACCTAATAGAAATACAATTGAA TTCTTATGAAAAATTTTTGCAACTTGAGAGATTAAAAAATAATAAACCTTTGCTCAATGAGGGCCTTGAATCTGTGTTTA GAGATGTTTTTCCTATGAAAAGTAGCAATGGTGAGGTTGCTCTTGAATATGAAAAATATTATATTGAATATGATTCTATT AGCTTTACTGAGAAAGAGTGTAAAAGAAAGGGGCAAAGTTATGAGGCTGTTTTAAAGATAAGATTAAACTTACAGTTTCT AACAACAGGAGAGATAAGACAAAAAGATGTTTATATGGGAACTATTCCTTTAATGACAGATAGAGGAACTTTTATCGTTA ATGGTGCAGAAAGAGTCATTGTATCACAAATTCATAGATCTCCGGGGGTTGTTTTTTATAAGGAAAAAGATTTATATTAT GCTCGTATTATTCCTTATCGTGGTTCTTGGCTTGAATTTGAGATTGACTCAAAAAAGGATTACCTTTATGTTAAGATAGA CAGAAAAAAAAGAATATTAGTTACTCTTTTCTTAAGAGCTTTAGGTCTTGATACTAGAGAAAAAATAATAGAGACTTTTT ATAAGATTAGAAAAATTGAAGTAAATGATGATACTAAAAGAGAGATTACAGGACAGTATTTAGCTACAAACATTACTATA AAAGAAAATATGACTTATCGGGCAGGTGATAAGATAACTTTGCAAGATATTGAAGATTTTTTGCAAAATGGAGTTAAAGA AATAAACTTGATTGATTTTGATGGGTATGATAGTGTTCCTGGAAAACATTTCATTAGTTCCGATGTTATTTTAAATTGTT TTGAAAAAGAAGATGCTTATTTTGCTTTAAAAGATGGATTTAAGGAGCTTTCACGAGAATCCGTGATGCTTGCAGTTTAT AGTGTACTTTTGCCTGGTGAACCAATATCAATTGACAATGCTGAGAACGATTTAAGAACTATATTTTTTTCAGAAAAAAG ATATGATTTAGGTCATGTAGGAAGATATAAACTTTCTAAGAAGTTTGGTCTTGATGATCTTACAACATCAGTTCTTACTA TGACAGATATAGTAAATACTATATCTCATCTTTTAAGAATATATGATGGGCATGATGTTCTTGATGATATAGATCATCTT GGAAATAGAAGAGTGCGTTCTGTTGGTGAGTTACTTACAAACATATATAAAGGTGCAATGTCAAGAGTAGAAAAAATTGC AAAGGACAGAATGTCTAATAAAGAAGTATTCAATTTGAAACCTCAAGAATTAATTAGTGTTAAGCCCGTTGTTTCTGCTG TTAAAGAATTTTTTGCAACCAGTCAGCTTTCTCAGTTTATGGATCAGGTTAATCCTTTAGCCGAACTTACGCATAAGAGA CGTCTTAATGCATTGGGTCCTGGTGGACTCTCAAGGGATCGAGCAGGTTTTGAAGTAAGAGATGTACATTATACTCATTA TGGTAGGATGTGTCCTATTGAAACTCCTGAAGGCCCAAATATTGGACTTATTGTTTCTTTGGCTACTTATTCAAAAGTTA ATGATTATGGTTTCTTAGAAACTCCTTATAGGAAGGTGATTGATGGTAAGGTGACCGATGATATTGAATATTTGTCTGCT ATTGATGAGGAAAAAAAATGTATTGCGCAAGCAAATGCTTCTGTTAGTTCTGATGGTAATTATACTGATGATTTGGTGTC TGTTAGGATTTCTGGGGATTATACTACAATGATGCCTAAAAATATCGATTACATGGATGTTTCGCCTAGACAATTAATAT CTGTCTCTTCGGCGTTAATACCTTTTCTTGAACATAATGATGCAAATCGTGCTCTTATGGGTTCGAATATGCAACGTCAG GCAGTTCCTTTATTATTTCCACAGCCACCTATTGTTGGTACAGGTATGGAGAGGATAGTTGCAAAAGACTCTGGTGTTGT TATTAAAGCAAAAAGACCTGGTAGAGTTGTCTTAGCCACAAACAAAAAGATAGTTATTAAACCTGATAATGCAACTTCTG AACGAGATTTAGATGAATATGAACTTTATAAATATGAGAGGACAAACCAGGATACTTCTTTCAATCATTCAGTTTTGGTG AAGAATGGCCAAATTGTTAATAAGGATGAGATAATAGCAGATGGTCCTGCTACTAGATATGGAGAATTGGCGCTTGGTAA TAATTTATTAGTTGGTTTTATTCCGTGGAATGGATTTAATTATGAGGATGCTATTTTAATTTCTGAGAGAATTGTAAAGG AAGATCTTTATACTTCAATTCATATTAAAGAATTTAGCATTGAAGTAAGAGAGACTAAGCTTGGACCTGAAAAAGTTACG GCTGATATTCCTAATGTTAGTGGAAAGATATTGAGTAAACTTGACGAAAATGGAATTGTAAGAATAGGGACTTATGTAAA ACCAGGTGATATTTTAATTGGTAAAGTTACTCCAAAATCAGAAGGAGATATTACCCCTGAATTTAAACTTTTAACTTCTA TATTTGGTGAGAAAGCAAAGGATGTTAAGAATAATTCATTAAAAGTTCCTCATGGTACTGAAGGAACTGTAATTGATGTT CAAAGAATTACTAAAGATGATGTTGGAAATCTTCCACCTGGTGTGGATGAAATATTAAAGGTTTATATTGCCAAAAAAAG AAAACTTAAAGAAGGTGATAAAATGGCAGGAAGACATGGAAATAAGGGTGTAGTTGCAAAGATTCTTCCTGTTGAAGATA TGCCATATCTTGCAGATGGGACCCCTCTTGATATATGCTTGAATCCTTTGGGAGTGCCATCTCGTATGAATATTGGACAA TTGATGGAATCTCAGCTTGGTCTTGCTGGTAAGTATCTTGGCGAATATTATGATGTTCCTGTTTTTGAGTCTGCTACAAA TGAATGTATTCAAGAAAAGTTAAAAAAAGCTGGATTTAATGAGACGTCAAAGGCAGTCTTGTATGATGGATATACAGGTG AACCATTTGAAAATGAAGTTATGGTTGGAGTTATATATATGTTGAAACTTCATCATCTTGTTGATGATAAGATGCATGCA AGGTCTACAGGTCCTTATTCACTTGTATCTCAACAACCTCTTGGAGGAAAAGCTCAATTTGGTGGACAAAGACTTGGAGA GATGGAAGTTTGGGCTCTTGAAGCTTATGGAGCTGCGCATACTTTGCAAGAATTATTAACAGTAAAGTCAGATGATATGT CAGGAAGAGTTAAGATATATGAAAATATTGTTAAGGGCATTCCTACTAACGTATCTGGAATTCCTGAATCTTTCAATGTT TTGATGCAGGAACTAAGAGGTCTTGGTTTTGATTTATCTATTTATGATGATAATGGAAATCAAATTCCTTTAACAGAAAA GGAAGAGGAATTAATTAATAAGACTTAG
Upstream 100 bases:
>100_bases GTTGAAATTAAGTAAAGCATTAAAAATATGCCAAATTTTTTATTCCACATGTCGTTTAAGTGGCATGTGGTTTATTGTGT CTTAAAAAAGGAGTCTTTTA
Downstream 100 bases:
>100_bases GTTTTGAGGATTTTATGAAAGAGATAAAAGATTTTGAAAAGATAAGAATAAAAATAGCATCTCCTGACCAAATTAGAAGT TGGTCTTATGGAGAAGTTAA
Product: DNA-directed RNA polymerase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1155_residues MIKRVHLGQGKAEEILNLPNLIEIQLNSYEKFLQLERLKNNKPLLNEGLESVFRDVFPMKSSNGEVALEYEKYYIEYDSI SFTEKECKRKGQSYEAVLKIRLNLQFLTTGEIRQKDVYMGTIPLMTDRGTFIVNGAERVIVSQIHRSPGVVFYKEKDLYY ARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILVTLFLRALGLDTREKIIETFYKIRKIEVNDDTKREITGQYLATNITI KENMTYRAGDKITLQDIEDFLQNGVKEINLIDFDGYDSVPGKHFISSDVILNCFEKEDAYFALKDGFKELSRESVMLAVY SVLLPGEPISIDNAENDLRTIFFSEKRYDLGHVGRYKLSKKFGLDDLTTSVLTMTDIVNTISHLLRIYDGHDVLDDIDHL GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPVVSAVKEFFATSQLSQFMDQVNPLAELTHKR RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSKVNDYGFLETPYRKVIDGKVTDDIEYLSA IDEEKKCIAQANASVSSDGNYTDDLVSVRISGDYTTMMPKNIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQ AVPLLFPQPPIVGTGMERIVAKDSGVVIKAKRPGRVVLATNKKIVIKPDNATSERDLDEYELYKYERTNQDTSFNHSVLV KNGQIVNKDEIIADGPATRYGELALGNNLLVGFIPWNGFNYEDAILISERIVKEDLYTSIHIKEFSIEVRETKLGPEKVT ADIPNVSGKILSKLDENGIVRIGTYVKPGDILIGKVTPKSEGDITPEFKLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDV QRITKDDVGNLPPGVDEILKVYIAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQ LMESQLGLAGKYLGEYYDVPVFESATNECIQEKLKKAGFNETSKAVLYDGYTGEPFENEVMVGVIYMLKLHHLVDDKMHA RSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMSGRVKIYENIVKGIPTNVSGIPESFNV LMQELRGLGFDLSIYDDNGNQIPLTEKEEELINKT
Sequences:
NA
Specific function: NA
COG id: COG0085
COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA