| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is htpG [H]
Identifier: 203284466
GI number: 203284466
Start: 588021
End: 589868
Strand: Reverse
Name: htpG [H]
Synonym: BDU_562
Alternate gene names: 203284466
Gene position: 589868-588021 (Counterclockwise)
Preceding gene: 203284468
Following gene: 203284459
Centisome position: 63.31
GC content: 26.35
Gene sequence:
>1848_bases ATGAAAAAACAATTTGATACAGAAGTCAATGATTTACTTTATTTAATCATACATTCTCTTTACTCACATAAAGAAATATT TTTAAGAGAATTAATATCAAATGCTTCTGATGCCATTGATAAACTTAAATTTTTAAACATCACAGATGAAAAATTTAAAG ACATAAAATTAGATCCTCGAATAGATATAAATTTTGATGAAAAATCCATCACAATAAAAGATAATGGAATTGGAATGAAT AGAGAGGATTTAATTAGTCACCTCGGAACAATTGCAAAATCAGGCACTAAAGAATTTATTAACAACTTAAAAAAAGATGA AAAAAAAGCTTCAAGCCTAATTGGACAATTTGGTGTTGGTTTTTACAGTGCTTTTATTGTAGCAGACAAAGTTGAAGTTA TAACAAAAAAAGCTCTAGATAATATTGCATATATTTGGTCTAGTGATGGAAAAACAGGATATGAAATCAATGAAACAAAT AAAGATGAGAATGGAACTGAAATAATACTTCACCTTAATAAAGAGGGAACCGAATATGCTAACAAATGGAAAATTCAAGA AATTATAAAAAAATACTCAAATCATATAAGCTATCCTATTTTTATTAAATATAGAGAACCTATAATGAAGGATGGCAAAC AAGAAGGATTTGAAGAGAAAGAAGATAAATTAAATGATACAACAGCTATTTGGACAAAAAATAAAAATGAAATCTCTAAT GAAGAATATAATGAATTTTATAAAAATTTAGCTTTTGATTATGAAAATCCATTAATTCATATTCATACAAAAGCCGAGGG AAGTATTGAATACACAAATCTTTTCTACGTTCCAAGTAAAGCTTCCTATGACCTATATTATCCAAATACTAAACCTGGGG TAAAATTATTTATAAATAGAATTTTTATTTCAGATTCTGCTGACAGCTTACTTCCAAATTACCTAAGATTTATAAAAGGA ATAATAGATTGCCAAGATTTACCCCTAAATGTAAGTAGAGAAATTTTACAAAAAAATAAAACATTAGCCAAAATAAAGGC ATCTTCTGTAAAAAAAATACTTAGCGAACTTGAAAAATTAAGTGAAAACGACCCCACTAAATTCAATGAATTTTCTAAAG AATTTGGAAGATGCTTAAAAGAAGGGGTTTATTCCGATTTTGATAATAGAAATAAGCTAATATCTCTAATTAGATTCAAA TCTTCTAATGTAAATGGATTTGTATCACTAAAAGAATATAAAGATAGAATGCCTGCAGAACAAAAAAGCATATATTACAT CACTGGAGGCAAAGAAAATATTCTTAAAATCAACCCTATTGTAAATGCTTATAAAGATAGAGGATATGAAACTCTCATTA TGGATGATGAGATTGACGAAGCTATTTTAAATTTCATAACAGAATATGAGGGCATTAAATTAAAAGCAATAAATAAAAAT GAAACAAGTGATGAATTAAAAGATGAAAATTTCAAAAAAATAGAAGAAGAATTTCAAGACATACTGTCTAAAATAAAAGA AATATTAAAAGATCATGTTAAAGATGTTTCATTATCAGCAACCCTCGTACAAGAACCATCAGCAATAATAATTGACAGCA CTGATCCTACTTATCAAATGCAAAAAATCATGCTATCAATGGGACAAGAAGTTAAAGAAACAAAACCCATTCTTGAACTT AATCCAAACAACAAAATTATTCAAAATTTAAAAAATTTAGATGATACAACCTTAGAAAAAATAAGCATCATTCTTCTTGA AGAAGCAATAATAACTTCAGGACTGCCAAGCAAAAACCCAAATCAATTTATAAACATAATAAATGAAATGTTAGAAAAAA ATATATAA
Upstream 100 bases:
>100_bases TCGTATTTTTTTCATAGAAAAATTATTTATTCATTATTTTTAGATTATGTTATATTATAAAAAAAGTAAAGATTAAACGA ATACAAGATAGGAGAATTCT
Downstream 100 bases:
>100_bases ATAAAAGTAAGTTCGCATACTCATGAGTATGCGAACTTACTTTTTAACTCTAAGAACTATATCTTTACCCGCTTCAACAG GACTAGCTTGTAATATTTTA
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MKKQFDTEVNDLLYLIIHSLYSHKEIFLRELISNASDAIDKLKFLNITDEKFKDIKLDPRIDINFDEKSITIKDNGIGMN REDLISHLGTIAKSGTKEFINNLKKDEKKASSLIGQFGVGFYSAFIVADKVEVITKKALDNIAYIWSSDGKTGYEINETN KDENGTEIILHLNKEGTEYANKWKIQEIIKKYSNHISYPIFIKYREPIMKDGKQEGFEEKEDKLNDTTAIWTKNKNEISN EEYNEFYKNLAFDYENPLIHIHTKAEGSIEYTNLFYVPSKASYDLYYPNTKPGVKLFINRIFISDSADSLLPNYLRFIKG IIDCQDLPLNVSREILQKNKTLAKIKASSVKKILSELEKLSENDPTKFNEFSKEFGRCLKEGVYSDFDNRNKLISLIRFK SSNVNGFVSLKEYKDRMPAEQKSIYYITGGKENILKINPIVNAYKDRGYETLIMDDEIDEAILNFITEYEGIKLKAINKN ETSDELKDENFKKIEEEFQDILSKIKEILKDHVKDVSLSATLVQEPSAIIIDSTDPTYQMQKIMLSMGQEVKETKPILEL NPNNKIIQNLKNLDDTTLEKISIILLEEAIITSGLPSKNPNQFINIINEMLEKNI
Sequences:
>Translated_615_residues MKKQFDTEVNDLLYLIIHSLYSHKEIFLRELISNASDAIDKLKFLNITDEKFKDIKLDPRIDINFDEKSITIKDNGIGMN REDLISHLGTIAKSGTKEFINNLKKDEKKASSLIGQFGVGFYSAFIVADKVEVITKKALDNIAYIWSSDGKTGYEINETN KDENGTEIILHLNKEGTEYANKWKIQEIIKKYSNHISYPIFIKYREPIMKDGKQEGFEEKEDKLNDTTAIWTKNKNEISN EEYNEFYKNLAFDYENPLIHIHTKAEGSIEYTNLFYVPSKASYDLYYPNTKPGVKLFINRIFISDSADSLLPNYLRFIKG IIDCQDLPLNVSREILQKNKTLAKIKASSVKKILSELEKLSENDPTKFNEFSKEFGRCLKEGVYSDFDNRNKLISLIRFK SSNVNGFVSLKEYKDRMPAEQKSIYYITGGKENILKINPIVNAYKDRGYETLIMDDEIDEAILNFITEYEGIKLKAINKN ETSDELKDENFKKIEEEFQDILSKIKEILKDHVKDVSLSATLVQEPSAIIIDSTDPTYQMQKIMLSMGQEVKETKPILEL NPNNKIIQNLKNLDDTTLEKISIILLEEAIITSGLPSKNPNQFINIINEMLEKNI >Mature_615_residues MKKQFDTEVNDLLYLIIHSLYSHKEIFLRELISNASDAIDKLKFLNITDEKFKDIKLDPRIDINFDEKSITIKDNGIGMN REDLISHLGTIAKSGTKEFINNLKKDEKKASSLIGQFGVGFYSAFIVADKVEVITKKALDNIAYIWSSDGKTGYEINETN KDENGTEIILHLNKEGTEYANKWKIQEIIKKYSNHISYPIFIKYREPIMKDGKQEGFEEKEDKLNDTTAIWTKNKNEISN EEYNEFYKNLAFDYENPLIHIHTKAEGSIEYTNLFYVPSKASYDLYYPNTKPGVKLFINRIFISDSADSLLPNYLRFIKG IIDCQDLPLNVSREILQKNKTLAKIKASSVKKILSELEKLSENDPTKFNEFSKEFGRCLKEGVYSDFDNRNKLISLIRFK SSNVNGFVSLKEYKDRMPAEQKSIYYITGGKENILKINPIVNAYKDRGYETLIMDDEIDEAILNFITEYEGIKLKAINKN ETSDELKDENFKKIEEEFQDILSKIKEILKDHVKDVSLSATLVQEPSAIIIDSTDPTYQMQKIMLSMGQEVKETKPILEL NPNNKIIQNLKNLDDTTLEKISIILLEEAIITSGLPSKNPNQFINIINEMLEKNI
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI20149594, Length=672, Percent_Identity=36.1607142857143, Blast_Score=381, Evalue=1e-105, Organism=Homo sapiens, GI155722983, Length=634, Percent_Identity=30.2839116719243, Blast_Score=339, Evalue=4e-93, Organism=Homo sapiens, GI154146191, Length=407, Percent_Identity=34.6437346437346, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI153792590, Length=407, Percent_Identity=34.6437346437346, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI4507677, Length=411, Percent_Identity=29.9270072992701, Blast_Score=213, Evalue=3e-55, Organism=Escherichia coli, GI1786679, Length=622, Percent_Identity=41.9614147909968, Blast_Score=505, Evalue=1e-144, Organism=Caenorhabditis elegans, GI17559162, Length=657, Percent_Identity=37.1385083713851, Blast_Score=397, Evalue=1e-111, Organism=Caenorhabditis elegans, GI17542208, Length=667, Percent_Identity=35.832083958021, Blast_Score=374, Evalue=1e-104, Organism=Caenorhabditis elegans, GI115535205, Length=641, Percent_Identity=31.8252730109204, Blast_Score=303, Evalue=2e-82, Organism=Caenorhabditis elegans, GI115535167, Length=430, Percent_Identity=37.6744186046512, Blast_Score=273, Evalue=2e-73, Organism=Saccharomyces cerevisiae, GI6323840, Length=672, Percent_Identity=35.7142857142857, Blast_Score=388, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6325016, Length=407, Percent_Identity=35.3808353808354, Blast_Score=253, Evalue=6e-68, Organism=Drosophila melanogaster, GI17647529, Length=679, Percent_Identity=35.7879234167894, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI21357739, Length=677, Percent_Identity=34.2688330871492, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI24586016, Length=655, Percent_Identity=31.6030534351145, Blast_Score=333, Evalue=3e-91,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 70938; Mature: 70938
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQFDTEVNDLLYLIIHSLYSHKEIFLRELISNASDAIDKLKFLNITDEKFKDIKLDPR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCC IDINFDEKSITIKDNGIGMNREDLISHLGTIAKSGTKEFINNLKKDEKKASSLIGQFGVG EEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FYSAFIVADKVEVITKKALDNIAYIWSSDGKTGYEINETNKDENGTEIILHLNKEGTEYA HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEECCCCCCCCCCEEEEEECCCCCHHH NKWKIQEIIKKYSNHISYPIFIKYREPIMKDGKQEGFEEKEDKLNDTTAIWTKNKNEISN HHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHCCCHHHHHHCCCCEEEEECCCCCCCC EEYNEFYKNLAFDYENPLIHIHTKAEGSIEYTNLFYVPSKASYDLYYPNTKPGVKLFINR HHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCCCHHHHEEH IFISDSADSLLPNYLRFIKGIIDCQDLPLNVSREILQKNKTLAKIKASSVKKILSELEKL HEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SENDPTKFNEFSKEFGRCLKEGVYSDFDNRNKLISLIRFKSSNVNGFVSLKEYKDRMPAE CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCC QKSIYYITGGKENILKINPIVNAYKDRGYETLIMDDEIDEAILNFITEYEGIKLKAINKN CCEEEEEECCCCCEEEECHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCC ETSDELKDENFKKIEEEFQDILSKIKEILKDHVKDVSLSATLVQEPSAIIIDSTDPTYQM CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEEEEECCCCHHHH QKIMLSMGQEVKETKPILELNPNNKIIQNLKNLDDTTLEKISIILLEEAIITSGLPSKNP HHHHHHHCHHHHHCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCH NQFINIINEMLEKNI HHHHHHHHHHHHCCC >Mature Secondary Structure MKKQFDTEVNDLLYLIIHSLYSHKEIFLRELISNASDAIDKLKFLNITDEKFKDIKLDPR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHCCCCCCC IDINFDEKSITIKDNGIGMNREDLISHLGTIAKSGTKEFINNLKKDEKKASSLIGQFGVG EEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FYSAFIVADKVEVITKKALDNIAYIWSSDGKTGYEINETNKDENGTEIILHLNKEGTEYA HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEECCCCCCCCCCEEEEEECCCCCHHH NKWKIQEIIKKYSNHISYPIFIKYREPIMKDGKQEGFEEKEDKLNDTTAIWTKNKNEISN HHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHCCCHHHHHHCCCCEEEEECCCCCCCC EEYNEFYKNLAFDYENPLIHIHTKAEGSIEYTNLFYVPSKASYDLYYPNTKPGVKLFINR HHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCCCHHHHEEH IFISDSADSLLPNYLRFIKGIIDCQDLPLNVSREILQKNKTLAKIKASSVKKILSELEKL HEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SENDPTKFNEFSKEFGRCLKEGVYSDFDNRNKLISLIRFKSSNVNGFVSLKEYKDRMPAE CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCC QKSIYYITGGKENILKINPIVNAYKDRGYETLIMDDEIDEAILNFITEYEGIKLKAINKN CCEEEEEECCCCCEEEECHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCC ETSDELKDENFKKIEEEFQDILSKIKEILKDHVKDVSLSATLVQEPSAIIIDSTDPTYQM CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCCEEEEECCCCHHHH QKIMLSMGQEVKETKPILELNPNNKIIQNLKNLDDTTLEKISIILLEEAIITSGLPSKNP HHHHHHHCHHHHHCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCH NQFINIINEMLEKNI HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA