Click here to switch to the map view.

The map label for this gene is flaJ

Identifier: 203284456

GI number: 203284456

Start: 576483

End: 576905

Strand: Reverse

Name: flaJ

Synonym: BDU_552

Alternate gene names: NA

Gene position: 576905-576483 (Counterclockwise)

Preceding gene: 203284457

Following gene: 203284455

Centisome position: 61.92

GC content: 25.06

Gene sequence:

>423_bases
TTGCTAAGAAAAGAAGATATTTACAAAAAAACACAAGTCAACACATCAAGTTCAATATCAATATTAGTAATGCTATATGA
AAAAGCAATACAAGATTTAGAAGTTGCTAAAGAATTTTATAAAAATAAAGACCCAAACAGCACAACAAAAGCTGATGAAA
AAGTTTATCATGCACAAGATATTATTATAGAATTAATGTCTACACTAAATTTTGAAGATGGTGGGGATATTTCAAATAAC
CTATTCTCAATATACTCCTTTTTAAATAAAACATTAGAAAGTGTTACATTAGAAAAAAATATAGATAATATCCAAGAAGT
CTTAAAGCACCTCAAAAATCTTCACACAGCTTGGAAAGCATTACTTAAAAAAGATAATAATATTATCATTAAAAAGAAAT
TAGGAATAAATATTGTCGGATAA

Upstream 100 bases:

>100_bases
GCAAAAGCCCTACAACTTGGAGCAAAAGGATATATTACAAAACCTTTCAGAGAAGAACAGATAGCAGAACAAATAAAAAC
ATTAAATTAGGAGAAAATCC

Downstream 100 bases:

>100_bases
TACAAATGTAATCTTAAAAAAATATTTACAAGATCTAATACTTGAACTAAAAAAATTAAAAGCTATCTTAGAATTTGAAA
ATACAAAAATCACTCAAGAA

Product: flagellar protein

Products: NA

Alternate protein names: Flagellar Protein; Hpt Protein; Endoflagellar Biosynthesis Chaperone; Flagellin-Specific Chaperone

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLRKEDIYKKTQVNTSSSISILVMLYEKAIQDLEVAKEFYKNKDPNSTTKADEKVYHAQDIIIELMSTLNFEDGGDISNN
LFSIYSFLNKTLESVTLEKNIDNIQEVLKHLKNLHTAWKALLKKDNNIIIKKKLGINIVG

Sequences:

>Translated_140_residues
MLRKEDIYKKTQVNTSSSISILVMLYEKAIQDLEVAKEFYKNKDPNSTTKADEKVYHAQDIIIELMSTLNFEDGGDISNN
LFSIYSFLNKTLESVTLEKNIDNIQEVLKHLKNLHTAWKALLKKDNNIIIKKKLGINIVG
>Mature_140_residues
MLRKEDIYKKTQVNTSSSISILVMLYEKAIQDLEVAKEFYKNKDPNSTTKADEKVYHAQDIIIELMSTLNFEDGGDISNN
LFSIYSFLNKTLESVTLEKNIDNIQEVLKHLKNLHTAWKALLKKDNNIIIKKKLGINIVG

Specific function: Unknown

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16075; Mature: 16075

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKEDIYKKTQVNTSSSISILVMLYEKAIQDLEVAKEFYKNKDPNSTTKADEKVYHAQD
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
IIIELMSTLNFEDGGDISNNLFSIYSFLNKTLESVTLEKNIDNIQEVLKHLKNLHTAWKA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLKKDNNIIIKKKLGINIVG
HHHCCCCEEEEEECCCEECC
>Mature Secondary Structure
MLRKEDIYKKTQVNTSSSISILVMLYEKAIQDLEVAKEFYKNKDPNSTTKADEKVYHAQD
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
IIIELMSTLNFEDGGDISNNLFSIYSFLNKTLESVTLEKNIDNIQEVLKHLKNLHTAWKA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLKKDNNIIIKKKLGINIVG
HHHCCCCEEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA