| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
Click here to switch to the map view.
The map label for this gene is 203284443
Identifier: 203284443
GI number: 203284443
Start: 562626
End: 562982
Strand: Reverse
Name: 203284443
Synonym: BDU_539
Alternate gene names: NA
Gene position: 562982-562626 (Counterclockwise)
Preceding gene: 203284444
Following gene: 203284442
Centisome position: 60.43
GC content: 28.85
Gene sequence:
>357_bases TTGAGCATAGATACCCTAGAATTTGAAGAAAACAGTACCCAAAATGTCATAAAGAGTAATTTTAACTTTGAAGGATATAT AGAAAGTAGTAAGCCTATAATCATTGATGGCATACTCAAAGGATTTATAAATTCTACAAGTTCAATATATCTAAGAGAAA AAGCCCATGTAGAAGCAGAAATTAAATGTAATAATTTTCTCAATCATGGTACAATGAAAGGAAATGTAGAGGCTTTAGAG ACAATCAAAATTTATAAAACTGGTAAATTAATTGGCAACATAACAACAAAAGAACTATTCATAGAAGCAGGAGCCTCATT TAATGGAAATTGTGAAATGGAGAAAAATGACAAATAA
Upstream 100 bases:
>100_bases AGAAGAGATTAAAATCTAAAAATCAATAAATTAAAATTTAAATGTAAAATAAAAAATGAATGCTTAAAATAAAAATAAGC ATTCATTTTTAGGAGAAACA
Downstream 100 bases:
>100_bases ACATTTTGACTCAAAATTAAGAATAATCCTTTTCTTGCCACTTTTGTGCCTAACAATCAAAATACAAGCACAAGTGAAAG AAGACTCCCTTTTACTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSIDTLEFEENSTQNVIKSNFNFEGYIESSKPIIIDGILKGFINSTSSIYLREKAHVEAEIKCNNFLNHGTMKGNVEALE TIKIYKTGKLIGNITTKELFIEAGASFNGNCEMEKNDK
Sequences:
>Translated_118_residues MSIDTLEFEENSTQNVIKSNFNFEGYIESSKPIIIDGILKGFINSTSSIYLREKAHVEAEIKCNNFLNHGTMKGNVEALE TIKIYKTGKLIGNITTKELFIEAGASFNGNCEMEKNDK >Mature_117_residues SIDTLEFEENSTQNVIKSNFNFEGYIESSKPIIIDGILKGFINSTSSIYLREKAHVEAEIKCNNFLNHGTMKGNVEALET IKIYKTGKLIGNITTKELFIEAGASFNGNCEMEKNDK
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13216; Mature: 13085
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDTLEFEENSTQNVIKSNFNFEGYIESSKPIIIDGILKGFINSTSSIYLREKAHVEAE CCCCCEECCCCCCCHHHHCCCCEEEEEECCCCEEEHHHHHHHHCCCCEEEEEECCCEEEE IKCNNFLNHGTMKGNVEALETIKIYKTGKLIGNITTKELFIEAGASFNGNCEMEKNDK EEECCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCEEEEEECCCCCCCCEEECCCCC >Mature Secondary Structure SIDTLEFEENSTQNVIKSNFNFEGYIESSKPIIIDGILKGFINSTSSIYLREKAHVEAE CCCCEECCCCCCCHHHHCCCCEEEEEECCCCEEEHHHHHHHHCCCCEEEEEECCCEEEE IKCNNFLNHGTMKGNVEALETIKIYKTGKLIGNITTKELFIEAGASFNGNCEMEKNDK EEECCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCEEEEEECCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA