Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

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The map label for this gene is 203284441

Identifier: 203284441

GI number: 203284441

Start: 560128

End: 561564

Strand: Reverse

Name: 203284441

Synonym: BDU_534

Alternate gene names: NA

Gene position: 561564-560128 (Counterclockwise)

Preceding gene: 203284442

Following gene: 203284436

Centisome position: 60.27

GC content: 23.17

Gene sequence:

>1437_bases
ATGAAAAGAATTTTAATGATGTTAATCTTCTTGACAAGGCTTTATGCAATCAATGAAACTAATAATCAAAAAAAATGCAT
AACAATCAACAATAATAAAAAAATAGTATACTGTCATAACGAAAAAATAGATCATCTCATATTAAATCTAAAAAGCAACA
AAAATGCAAATATAAAAATTAACACCCAATACAAAAGTCACTCATACAATATCCCAACAATCATTAATCAAGATCAAACA
ATGATATTAGAAATCAAAATAAATAATATCAAATCTATCAATTTCAATAACATTGAAATACAAAAATCCAGTATACAAAC
AACAAAAACAGATCTCCAAAAATTTAAAATATTCATTGATAAGGATGGATATTCTATCAATTTTAATCTCAATAAAAACA
TGTTTCCAATAATAGGCTTTAAATCAAAAGAAACAATATTAAATCCCATAATAACAAATTTATATTCAAAAAAAGAATCA
CAAAAAATAGTACTATCAAATCTCATCAAGTACACATCACTAGAAAATCACAATGATGAAATAAAATCTACCAAAAACGA
CAATATGATTCAAATTAATGAAATTGGATACATTAATATGAATGATTATTATGAAATCAATAAACCAATAAATGCTGACT
TAAAACTTATTTTCAATTATACAAAAAAAAATTACAGAAGAGATTCTTTTGAATTCTTTAATTTCATAGCAAATCCTAAT
GTATACATAATAAAATTTAAAACATTGCACGATCAAGCCTTAATGTTAAAAAGAATGGCATTCTTTCTCGAAAAAAAAGA
ATTTAGAGGAAGATTATTATCAAATACTGAACTAGAAAATAAAGTAGGATGGGGTGGTCATGATTATAGACTCCAAGATA
TAATTACATTTTTTAATGAAGCACAAAAATCAAATATTAAATTAAATAAAGAAGAAATAACTTTAAAAAACTTAATTATA
GCCAACAAATTAGCATATATTGAAAATAACATAATAAAAATTAAAAACAAATCAAAAAACATTGCATTTGCAACTTACTC
CGAAGATGAAATTATGTCAAAAACAGACCAAATGAGAATCTTTATGCATGAAATGCTACACATGTATTTTTTTACAGACA
ATAATTTCAATAAAGAAATTGTTAATTTTTGGAATAAAAATATTTCACCAAATAACAAAAAATCTTGGATTAATTTTTTA
GATAACATAGGTTATGATGTCACATTTAATTATTTAGTAATGAATGAATTTTATGCATATACAACCGCGCTCCCAAAAGA
AAATATAGCAAATTATTTAATTAACACCAATTACTTCTCCAAAACTGAATTTAAAGAATATGAACAATGGGCCATAAAAT
TAGAAAAATTATTATGGCAAACAAAAGGATTAATACCGGGAGAACTATTAATCCTTTTTAAAGACAACAGCAATTAA

Upstream 100 bases:

>100_bases
GTTTTCATCCTGGCAACAGGGGTTCGATTCCCCTAGAGGATGTAAAAAATTTGCTTAAATTTTCATTTATCACATTCTTT
TCATTATAATATAGTATGTA

Downstream 100 bases:

>100_bases
AAACAAAACAATATAATGAAAATTAATTATCATTACTTGGAATTAATACAATCTCTGTTCCTTGCTTAAAATCGATCTTC
TTAAATAACATATTTATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MKRILMMLIFLTRLYAINETNNQKKCITINNNKKIVYCHNEKIDHLILNLKSNKNANIKINTQYKSHSYNIPTIINQDQT
MILEIKINNIKSINFNNIEIQKSSIQTTKTDLQKFKIFIDKDGYSINFNLNKNMFPIIGFKSKETILNPIITNLYSKKES
QKIVLSNLIKYTSLENHNDEIKSTKNDNMIQINEIGYINMNDYYEINKPINADLKLIFNYTKKNYRRDSFEFFNFIANPN
VYIIKFKTLHDQALMLKRMAFFLEKKEFRGRLLSNTELENKVGWGGHDYRLQDIITFFNEAQKSNIKLNKEEITLKNLII
ANKLAYIENNIIKIKNKSKNIAFATYSEDEIMSKTDQMRIFMHEMLHMYFFTDNNFNKEIVNFWNKNISPNNKKSWINFL
DNIGYDVTFNYLVMNEFYAYTTALPKENIANYLINTNYFSKTEFKEYEQWAIKLEKLLWQTKGLIPGELLILFKDNSN

Sequences:

>Translated_478_residues
MKRILMMLIFLTRLYAINETNNQKKCITINNNKKIVYCHNEKIDHLILNLKSNKNANIKINTQYKSHSYNIPTIINQDQT
MILEIKINNIKSINFNNIEIQKSSIQTTKTDLQKFKIFIDKDGYSINFNLNKNMFPIIGFKSKETILNPIITNLYSKKES
QKIVLSNLIKYTSLENHNDEIKSTKNDNMIQINEIGYINMNDYYEINKPINADLKLIFNYTKKNYRRDSFEFFNFIANPN
VYIIKFKTLHDQALMLKRMAFFLEKKEFRGRLLSNTELENKVGWGGHDYRLQDIITFFNEAQKSNIKLNKEEITLKNLII
ANKLAYIENNIIKIKNKSKNIAFATYSEDEIMSKTDQMRIFMHEMLHMYFFTDNNFNKEIVNFWNKNISPNNKKSWINFL
DNIGYDVTFNYLVMNEFYAYTTALPKENIANYLINTNYFSKTEFKEYEQWAIKLEKLLWQTKGLIPGELLILFKDNSN
>Mature_478_residues
MKRILMMLIFLTRLYAINETNNQKKCITINNNKKIVYCHNEKIDHLILNLKSNKNANIKINTQYKSHSYNIPTIINQDQT
MILEIKINNIKSINFNNIEIQKSSIQTTKTDLQKFKIFIDKDGYSINFNLNKNMFPIIGFKSKETILNPIITNLYSKKES
QKIVLSNLIKYTSLENHNDEIKSTKNDNMIQINEIGYINMNDYYEINKPINADLKLIFNYTKKNYRRDSFEFFNFIANPN
VYIIKFKTLHDQALMLKRMAFFLEKKEFRGRLLSNTELENKVGWGGHDYRLQDIITFFNEAQKSNIKLNKEEITLKNLII
ANKLAYIENNIIKIKNKSKNIAFATYSEDEIMSKTDQMRIFMHEMLHMYFFTDNNFNKEIVNFWNKNISPNNKKSWINFL
DNIGYDVTFNYLVMNEFYAYTTALPKENIANYLINTNYFSKTEFKEYEQWAIKLEKLLWQTKGLIPGELLILFKDNSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56841; Mature: 56841

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILMMLIFLTRLYAINETNNQKKCITINNNKKIVYCHNEKIDHLILNLKSNKNANIKI
CHHHHHHHHHHHHHHEECCCCCCEEEEEEECCEEEEEECCCCCEEEEEEEECCCCCCEEE
NTQYKSHSYNIPTIINQDQTMILEIKINNIKSINFNNIEIQKSSIQTTKTDLQKFKIFID
EEEECCCCCCCCEEECCCCEEEEEEEECCEEEECCCEEEEECCCCHHHHHHHEEEEEEEE
KDGYSINFNLNKNMFPIIGFKSKETILNPIITNLYSKKESQKIVLSNLIKYTSLENHNDE
CCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCH
IKSTKNDNMIQINEIGYINMNDYYEINKPINADLKLIFNYTKKNYRRDSFEFFNFIANPN
HHCCCCCCEEEEECEEEEECCCCEEECCCCCCCEEEEEEEHHHCCCCCHHHHHHHHCCCC
VYIIKFKTLHDQALMLKRMAFFLEKKEFRGRLLSNTELENKVGWGGHDYRLQDIITFFNE
EEEEEEEECCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AQKSNIKLNKEEITLKNLIIANKLAYIENNIIKIKNKSKNIAFATYSEDEIMSKTDQMRI
HHHCCEEECHHHEEHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHH
FMHEMLHMYFFTDNNFNKEIVNFWNKNISPNNKKSWINFLDNIGYDVTFNYLVMNEFYAY
HHHHHHEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEHHHHH
TTALPKENIANYLINTNYFSKTEFKEYEQWAIKLEKLLWQTKGLIPGELLILFKDNSN
HHCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MKRILMMLIFLTRLYAINETNNQKKCITINNNKKIVYCHNEKIDHLILNLKSNKNANIKI
CHHHHHHHHHHHHHHEECCCCCCEEEEEEECCEEEEEECCCCCEEEEEEEECCCCCCEEE
NTQYKSHSYNIPTIINQDQTMILEIKINNIKSINFNNIEIQKSSIQTTKTDLQKFKIFID
EEEECCCCCCCCEEECCCCEEEEEEEECCEEEECCCEEEEECCCCHHHHHHHEEEEEEEE
KDGYSINFNLNKNMFPIIGFKSKETILNPIITNLYSKKESQKIVLSNLIKYTSLENHNDE
CCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCH
IKSTKNDNMIQINEIGYINMNDYYEINKPINADLKLIFNYTKKNYRRDSFEFFNFIANPN
HHCCCCCCEEEEECEEEEECCCCEEECCCCCCCEEEEEEEHHHCCCCCHHHHHHHHCCCC
VYIIKFKTLHDQALMLKRMAFFLEKKEFRGRLLSNTELENKVGWGGHDYRLQDIITFFNE
EEEEEEEECCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AQKSNIKLNKEEITLKNLIIANKLAYIENNIIKIKNKSKNIAFATYSEDEIMSKTDQMRI
HHHCCEEECHHHEEHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHH
FMHEMLHMYFFTDNNFNKEIVNFWNKNISPNNKKSWINFLDNIGYDVTFNYLVMNEFYAY
HHHHHHEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEHHHHH
TTALPKENIANYLINTNYFSKTEFKEYEQWAIKLEKLLWQTKGLIPGELLILFKDNSN
HHCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA