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The map label for this gene is rsmI [H]

Identifier: 203284336

GI number: 203284336

Start: 458778

End: 459452

Strand: Reverse

Name: rsmI [H]

Synonym: BDU_425

Alternate gene names: 203284336

Gene position: 459452-458778 (Counterclockwise)

Preceding gene: 203284338

Following gene: 203284335

Centisome position: 49.31

GC content: 29.19

Gene sequence:

>675_bases
GTGTTATATATTGTGGGAACGCCTATAGGTAATTTAGGTGATATTACATATCGTGCAATTGATATTTTAAAGTTGGTTGA
TGTTATATTTGCTGAGGATACAAGAATTGCTAAGAGACTTTTATCTCATTATGGTATTGTTAAAAAATTAATTTCTTGTA
ATGCTATAACAGAATATAAGCGAATTGATTTATTGTTAAGTTATTTGTCTAGTGGAAGCAATGTGGCTTTTGTTAGTGAT
GCGGGAACTCCTTGTCTTAGTGATCCTGGTAGTTTGCTTGTTGATGCAGCATTTAAAAATGGATATAAAATTTGTCCTAT
TCCAGGTATTAGCTCTTTTAATACAGTAATTAGTGTTAATCCTTTTAGAGATAAAGTCATAGTATTTGAAGGATTTTTGC
CAAATAAAGGAGTTAAAAGGGTAAAGCGCATTGAAGAACTTTATCATAGAGGAGATGCGTTTATTTTGCTTGAGTCTAGT
CATAGAATTTTAAAATTATTGTCTGAAATTTCTTTAGTAGATTTAAATGCCAATGTTCTTGTTGGTCGTGAAATGACTAA
GTTATATGAAGAATATAAAATTGGCAAACCTTTGGAATTGAAAAAATATTTTGAAAAACATAATAAGGATAAAGGAGAAT
TTACGATTTTGGTTAGTAGAAAGTCTAAAAATTAA

Upstream 100 bases:

>100_bases
TTTGCATTAAATCCCATTGAGTATTAAATATTATTATTAGACAATATTAAGGTAATTTGTTTTTTTTGTAGATTGATATT
TAAACTCTTAAGGAGAACAT

Downstream 100 bases:

>100_bases
TATTAGTGGTTTTTTATAAAAAAAATGCGTTATATGATGTTATGTATTGATTGTTTTTATGACAAAGAGTAAATTATGAA
TGAAAAAATTGTAAATGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLYIVGTPIGNLGDITYRAIDILKLVDVIFAEDTRIAKRLLSHYGIVKKLISCNAITEYKRIDLLLSYLSSGSNVAFVSD
AGTPCLSDPGSLLVDAAFKNGYKICPIPGISSFNTVISVNPFRDKVIVFEGFLPNKGVKRVKRIEELYHRGDAFILLESS
HRILKLLSEISLVDLNANVLVGREMTKLYEEYKIGKPLELKKYFEKHNKDKGEFTILVSRKSKN

Sequences:

>Translated_224_residues
MLYIVGTPIGNLGDITYRAIDILKLVDVIFAEDTRIAKRLLSHYGIVKKLISCNAITEYKRIDLLLSYLSSGSNVAFVSD
AGTPCLSDPGSLLVDAAFKNGYKICPIPGISSFNTVISVNPFRDKVIVFEGFLPNKGVKRVKRIEELYHRGDAFILLESS
HRILKLLSEISLVDLNANVLVGREMTKLYEEYKIGKPLELKKYFEKHNKDKGEFTILVSRKSKN
>Mature_224_residues
MLYIVGTPIGNLGDITYRAIDILKLVDVIFAEDTRIAKRLLSHYGIVKKLISCNAITEYKRIDLLLSYLSSGSNVAFVSD
AGTPCLSDPGSLLVDAAFKNGYKICPIPGISSFNTVISVNPFRDKVIVFEGFLPNKGVKRVKRIEELYHRGDAFILLESS
HRILKLLSEISLVDLNANVLVGREMTKLYEEYKIGKPLELKKYFEKHNKDKGEFTILVSRKSKN

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=222, Percent_Identity=38.7387387387387, Blast_Score=150, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25158; Mature: 25158

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYIVGTPIGNLGDITYRAIDILKLVDVIFAEDTRIAKRLLSHYGIVKKLISCNAITEYK
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
RIDLLLSYLSSGSNVAFVSDAGTPCLSDPGSLLVDAAFKNGYKICPIPGISSFNTVISVN
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHEEEHHHHCCCEEECCCCCCCCCEEEEEC
PFRDKVIVFEGFLPNKGVKRVKRIEELYHRGDAFILLESSHRILKLLSEISLVDLNANVL
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEEECCCCEE
VGREMTKLYEEYKIGKPLELKKYFEKHNKDKGEFTILVSRKSKN
ECHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MLYIVGTPIGNLGDITYRAIDILKLVDVIFAEDTRIAKRLLSHYGIVKKLISCNAITEYK
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
RIDLLLSYLSSGSNVAFVSDAGTPCLSDPGSLLVDAAFKNGYKICPIPGISSFNTVISVN
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHEEEHHHHCCCEEECCCCCCCCCEEEEEC
PFRDKVIVFEGFLPNKGVKRVKRIEELYHRGDAFILLESSHRILKLLSEISLVDLNANVL
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEEECCCCEE
VGREMTKLYEEYKIGKPLELKKYFEKHNKDKGEFTILVSRKSKN
ECHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA