Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

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The map label for this gene is 203284309

Identifier: 203284309

GI number: 203284309

Start: 421211

End: 422062

Strand: Reverse

Name: 203284309

Synonym: BDU_393

Alternate gene names: NA

Gene position: 422062-421211 (Counterclockwise)

Preceding gene: 203284310

Following gene: 203284308

Centisome position: 45.3

GC content: 26.64

Gene sequence:

>852_bases
GTGAATTTGCTTAATGGTCTTTTGAATTTTTTATTTTTGTTTTATTCTAATGTGTCTATCATAAATGACGTTTCATCTAA
ATCTAGCATAAAGAGAACAATTGATTGGGATGCTAAAATAGTTTATTTTGATATTATTAAACCAGTAGATGAAGATAGAT
TTGGTAGAGTTGGTATTGATTCTACTTCTAGATTAGTGTTTAGTGTTAATGATTTTAAGGATACTTTGATAAGAGAATCG
CTTTTTGAAATTATAATTGATTCTGATTCTACTTTTAAAGACTATTTTGATTCTGATCCTCATTTAATATTATATTTTTC
AGGACTTGATAGTATTTTGAAAAGAGGATACATGAAATATTCAGAAGATTTGAAAAATATCACCGTTAGGTATGAGCTTT
GTATTTTCCCTGATTTTATAAATTTATTTTTAGGTCATAGTAAGCCTTATAAAGCTTTTTTTCCATTAATGAATACAACT
GTTGAACAGTTTGTTTATACCGGAATTATTATTTATGCGGGTGATGATTATAAATCTTCCTCTGGTTCTATTGTTAAATT
AGCTGATGCTTTTTTTGTTAAAATTTATGATGAAAATATTAAGCTTTATTTTGACAAAAGGATGGTTGACCCGGATGCCC
TTAAAAAATGGGGTATGTTTGAGTATACAAATGATATTTCTTATAAGAATAAAGACAGAATTGGAGATTATCCTTTAAGA
TTGATTGCTAAGGGGGTTTATGGCAAAAATCATTCAGATATTATACTTGATGATTATTCCATAAATAAGATCTTTTCAAA
TGAAAATAATATCAATCTTTTAAGAGAGGGTAAGTTCGTTATTATTAAATGA

Upstream 100 bases:

>100_bases
TATTTTGTTTTTAAAAAAATTTCTTATCCAAAAGATCCAGAAATTAATGATGGTTGGGCTTGGATAGGTGTTTATTTAGG
TAAAAAATAGGGAGATTTGT

Downstream 100 bases:

>100_bases
TAGACTTTAAATTGAAATTTTAAGATATTATTTAATAAGGCTTGTCTTTTTTAAGATAATAAATTAACATGGTATAAGGG
TTTATTACCGAAGGGAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNLLNGLLNFLFLFYSNVSIINDVSSKSSIKRTIDWDAKIVYFDIIKPVDEDRFGRVGIDSTSRLVFSVNDFKDTLIRES
LFEIIIDSDSTFKDYFDSDPHLILYFSGLDSILKRGYMKYSEDLKNITVRYELCIFPDFINLFLGHSKPYKAFFPLMNTT
VEQFVYTGIIIYAGDDYKSSSGSIVKLADAFFVKIYDENIKLYFDKRMVDPDALKKWGMFEYTNDISYKNKDRIGDYPLR
LIAKGVYGKNHSDIILDDYSINKIFSNENNINLLREGKFVIIK

Sequences:

>Translated_283_residues
MNLLNGLLNFLFLFYSNVSIINDVSSKSSIKRTIDWDAKIVYFDIIKPVDEDRFGRVGIDSTSRLVFSVNDFKDTLIRES
LFEIIIDSDSTFKDYFDSDPHLILYFSGLDSILKRGYMKYSEDLKNITVRYELCIFPDFINLFLGHSKPYKAFFPLMNTT
VEQFVYTGIIIYAGDDYKSSSGSIVKLADAFFVKIYDENIKLYFDKRMVDPDALKKWGMFEYTNDISYKNKDRIGDYPLR
LIAKGVYGKNHSDIILDDYSINKIFSNENNINLLREGKFVIIK
>Mature_283_residues
MNLLNGLLNFLFLFYSNVSIINDVSSKSSIKRTIDWDAKIVYFDIIKPVDEDRFGRVGIDSTSRLVFSVNDFKDTLIRES
LFEIIIDSDSTFKDYFDSDPHLILYFSGLDSILKRGYMKYSEDLKNITVRYELCIFPDFINLFLGHSKPYKAFFPLMNTT
VEQFVYTGIIIYAGDDYKSSSGSIVKLADAFFVKIYDENIKLYFDKRMVDPDALKKWGMFEYTNDISYKNKDRIGDYPLR
LIAKGVYGKNHSDIILDDYSINKIFSNENNINLLREGKFVIIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32958; Mature: 32958

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLNGLLNFLFLFYSNVSIINDVSSKSSIKRTIDWDAKIVYFDIIKPVDEDRFGRVGID
CCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHEECCCCEEEEEEEECCCCCCCCCEECCC
STSRLVFSVNDFKDTLIRESLFEIIIDSDSTFKDYFDSDPHLILYFSGLDSILKRGYMKY
CCCEEEEEECHHHHHHHHHHHHHEEECCCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHH
SEDLKNITVRYELCIFPDFINLFLGHSKPYKAFFPLMNTTVEQFVYTGIIIYAGDDYKSS
HHHHHCEEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC
SGSIVKLADAFFVKIYDENIKLYFDKRMVDPDALKKWGMFEYTNDISYKNKDRIGDYPLR
CCCEEEEEEEEEEEEEECCEEEEEECCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCHH
LIAKGVYGKNHSDIILDDYSINKIFSNENNINLLREGKFVIIK
HHHHHCCCCCCCCEEEECCCCEEEECCCCCEEEEECCCEEEEC
>Mature Secondary Structure
MNLLNGLLNFLFLFYSNVSIINDVSSKSSIKRTIDWDAKIVYFDIIKPVDEDRFGRVGID
CCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHEECCCCEEEEEEEECCCCCCCCCEECCC
STSRLVFSVNDFKDTLIRESLFEIIIDSDSTFKDYFDSDPHLILYFSGLDSILKRGYMKY
CCCEEEEEECHHHHHHHHHHHHHEEECCCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHH
SEDLKNITVRYELCIFPDFINLFLGHSKPYKAFFPLMNTTVEQFVYTGIIIYAGDDYKSS
HHHHHCEEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC
SGSIVKLADAFFVKIYDENIKLYFDKRMVDPDALKKWGMFEYTNDISYKNKDRIGDYPLR
CCCEEEEEEEEEEEEEECCEEEEEECCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCHH
LIAKGVYGKNHSDIILDDYSINKIFSNENNINLLREGKFVIIK
HHHHHCCCCCCCCEEEECCCCEEEECCCCCEEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA