| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284309
Identifier: 203284309
GI number: 203284309
Start: 421211
End: 422062
Strand: Reverse
Name: 203284309
Synonym: BDU_393
Alternate gene names: NA
Gene position: 422062-421211 (Counterclockwise)
Preceding gene: 203284310
Following gene: 203284308
Centisome position: 45.3
GC content: 26.64
Gene sequence:
>852_bases GTGAATTTGCTTAATGGTCTTTTGAATTTTTTATTTTTGTTTTATTCTAATGTGTCTATCATAAATGACGTTTCATCTAA ATCTAGCATAAAGAGAACAATTGATTGGGATGCTAAAATAGTTTATTTTGATATTATTAAACCAGTAGATGAAGATAGAT TTGGTAGAGTTGGTATTGATTCTACTTCTAGATTAGTGTTTAGTGTTAATGATTTTAAGGATACTTTGATAAGAGAATCG CTTTTTGAAATTATAATTGATTCTGATTCTACTTTTAAAGACTATTTTGATTCTGATCCTCATTTAATATTATATTTTTC AGGACTTGATAGTATTTTGAAAAGAGGATACATGAAATATTCAGAAGATTTGAAAAATATCACCGTTAGGTATGAGCTTT GTATTTTCCCTGATTTTATAAATTTATTTTTAGGTCATAGTAAGCCTTATAAAGCTTTTTTTCCATTAATGAATACAACT GTTGAACAGTTTGTTTATACCGGAATTATTATTTATGCGGGTGATGATTATAAATCTTCCTCTGGTTCTATTGTTAAATT AGCTGATGCTTTTTTTGTTAAAATTTATGATGAAAATATTAAGCTTTATTTTGACAAAAGGATGGTTGACCCGGATGCCC TTAAAAAATGGGGTATGTTTGAGTATACAAATGATATTTCTTATAAGAATAAAGACAGAATTGGAGATTATCCTTTAAGA TTGATTGCTAAGGGGGTTTATGGCAAAAATCATTCAGATATTATACTTGATGATTATTCCATAAATAAGATCTTTTCAAA TGAAAATAATATCAATCTTTTAAGAGAGGGTAAGTTCGTTATTATTAAATGA
Upstream 100 bases:
>100_bases TATTTTGTTTTTAAAAAAATTTCTTATCCAAAAGATCCAGAAATTAATGATGGTTGGGCTTGGATAGGTGTTTATTTAGG TAAAAAATAGGGAGATTTGT
Downstream 100 bases:
>100_bases TAGACTTTAAATTGAAATTTTAAGATATTATTTAATAAGGCTTGTCTTTTTTAAGATAATAAATTAACATGGTATAAGGG TTTATTACCGAAGGGAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MNLLNGLLNFLFLFYSNVSIINDVSSKSSIKRTIDWDAKIVYFDIIKPVDEDRFGRVGIDSTSRLVFSVNDFKDTLIRES LFEIIIDSDSTFKDYFDSDPHLILYFSGLDSILKRGYMKYSEDLKNITVRYELCIFPDFINLFLGHSKPYKAFFPLMNTT VEQFVYTGIIIYAGDDYKSSSGSIVKLADAFFVKIYDENIKLYFDKRMVDPDALKKWGMFEYTNDISYKNKDRIGDYPLR LIAKGVYGKNHSDIILDDYSINKIFSNENNINLLREGKFVIIK
Sequences:
>Translated_283_residues MNLLNGLLNFLFLFYSNVSIINDVSSKSSIKRTIDWDAKIVYFDIIKPVDEDRFGRVGIDSTSRLVFSVNDFKDTLIRES LFEIIIDSDSTFKDYFDSDPHLILYFSGLDSILKRGYMKYSEDLKNITVRYELCIFPDFINLFLGHSKPYKAFFPLMNTT VEQFVYTGIIIYAGDDYKSSSGSIVKLADAFFVKIYDENIKLYFDKRMVDPDALKKWGMFEYTNDISYKNKDRIGDYPLR LIAKGVYGKNHSDIILDDYSINKIFSNENNINLLREGKFVIIK >Mature_283_residues MNLLNGLLNFLFLFYSNVSIINDVSSKSSIKRTIDWDAKIVYFDIIKPVDEDRFGRVGIDSTSRLVFSVNDFKDTLIRES LFEIIIDSDSTFKDYFDSDPHLILYFSGLDSILKRGYMKYSEDLKNITVRYELCIFPDFINLFLGHSKPYKAFFPLMNTT VEQFVYTGIIIYAGDDYKSSSGSIVKLADAFFVKIYDENIKLYFDKRMVDPDALKKWGMFEYTNDISYKNKDRIGDYPLR LIAKGVYGKNHSDIILDDYSINKIFSNENNINLLREGKFVIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32958; Mature: 32958
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLNGLLNFLFLFYSNVSIINDVSSKSSIKRTIDWDAKIVYFDIIKPVDEDRFGRVGID CCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHEECCCCEEEEEEEECCCCCCCCCEECCC STSRLVFSVNDFKDTLIRESLFEIIIDSDSTFKDYFDSDPHLILYFSGLDSILKRGYMKY CCCEEEEEECHHHHHHHHHHHHHEEECCCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHH SEDLKNITVRYELCIFPDFINLFLGHSKPYKAFFPLMNTTVEQFVYTGIIIYAGDDYKSS HHHHHCEEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC SGSIVKLADAFFVKIYDENIKLYFDKRMVDPDALKKWGMFEYTNDISYKNKDRIGDYPLR CCCEEEEEEEEEEEEEECCEEEEEECCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCHH LIAKGVYGKNHSDIILDDYSINKIFSNENNINLLREGKFVIIK HHHHHCCCCCCCCEEEECCCCEEEECCCCCEEEEECCCEEEEC >Mature Secondary Structure MNLLNGLLNFLFLFYSNVSIINDVSSKSSIKRTIDWDAKIVYFDIIKPVDEDRFGRVGID CCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHEECCCCEEEEEEEECCCCCCCCCEECCC STSRLVFSVNDFKDTLIRESLFEIIIDSDSTFKDYFDSDPHLILYFSGLDSILKRGYMKY CCCEEEEEECHHHHHHHHHHHHHEEECCCCCHHHHCCCCCCEEEEECCHHHHHHHHHHHH SEDLKNITVRYELCIFPDFINLFLGHSKPYKAFFPLMNTTVEQFVYTGIIIYAGDDYKSS HHHHHCEEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCC SGSIVKLADAFFVKIYDENIKLYFDKRMVDPDALKKWGMFEYTNDISYKNKDRIGDYPLR CCCEEEEEEEEEEEEEECCEEEEEECCCCCHHHHHHCCCEEECCCCCCCCCCCCCCCCHH LIAKGVYGKNHSDIILDDYSINKIFSNENNINLLREGKFVIIK HHHHHCCCCCCCCEEEECCCCEEEECCCCCEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA