| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is bmpA-2 [H]
Identifier: 203284296
GI number: 203284296
Start: 407091
End: 408119
Strand: Reverse
Name: bmpA-2 [H]
Synonym: BDU_378
Alternate gene names: 203284296
Gene position: 408119-407091 (Counterclockwise)
Preceding gene: 203284297
Following gene: 203284295
Centisome position: 43.8
GC content: 30.32
Gene sequence:
>1029_bases ATGAATAAATTTATGGTATTAATTTGTGTGATATTAATTTTCTTAGGATGCAGTAAAAAGACATCTATTTTGGGAACTTC AGGAAAGGCGTTAATTTCTTTGATAGTTGATGGTACTTTTGATGATAAATCATTTGGTGAGGATGCTTGGAGAGGTGCTA AGGTTTTAGAAGATGAATTTGAAGTTGAAATTGTTGGAAGAGCTTCAACAAGTAGTGCTTATGCTGGTGATTTAGAGAGC CTTAAAGATAGAGGTTCTGACATTATTTGGGGAGTTGGTTTTAGACTGCAAGAGTCTATTGAACATGCTGCTTTATTGAA TAGAGATATTATTTATGGAGCTGTTGATGTTATTTATGAAGATGATACTAGTATTCCTGATAATTTGCTTGGTCTTTCCT TTAAAGTTGAAGAGGCTTCATTTTTAGCTGGGTATCTTGCGGCTAAAATATCTAAGACAGGTAAAATTGGATTTTTAGGT GGAATGGATAGTATGGTAATTAATGCATTTAGGTATGGATATGAAGCTGGTGCTAAATATGCAAATAAAGATGTTGGGTT AACTTCTCAATATTTGGGATCTTTTGTAGATTTGTCTTTAGCAAGGACTATTGCTTTAAAAATGTACAAAGATGATGTTG ATATCATATTTGTGTCAGCAGGGCTTGCAGGACTTGGTGCTATTGAGGTTTCAAAAGAACTTGGAGATGGGCATTATATT ATTGGCGTTGATCAAGATCAGTCTTATCTTGCTCCTGATAATGTATTGACATCAGTTATTAAGAATGTTGGAAATTCTAT TTATGAAATAACAAAGGATTATTTAAATACTAAGAGTTTTAATGGTGGTAAGTTACTAAAATTGGGTCTTAAAGATAAAG CTGTTAGTATTGTTAAAAATGGTTTTAAAATTACAGATGAGCTTAAATCTGAAATTCAAATTATAGAAAATAAGATAGTT AATAGTGATATTATAGTTCCAAGTAATTTTGATAAATATAATAATTTTTTAAATATTCATATTTATTAA
Upstream 100 bases:
>100_bases TTAATAATGAGATTACAGTTCCCAAAGATGAAAAATCTTATAATTATTTTATTAGTGATCATCTACATAAAAGATGATAT AAAATTAGAGGTTTTACTTT
Downstream 100 bases:
>100_bases GTCAATTCTTTTTTTATAGAAAAATATATTAACTTTATTAACATGTTAATATATAGACTATTTTTATCTTCTGAATAAAT TTTGTATTTATAAATTTTTG
Product: basic membrane protein A
Products: NA
Alternate protein names: Immunodominant antigen P39 [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MNKFMVLICVILIFLGCSKKTSILGTSGKALISLIVDGTFDDKSFGEDAWRGAKVLEDEFEVEIVGRASTSSAYAGDLES LKDRGSDIIWGVGFRLQESIEHAALLNRDIIYGAVDVIYEDDTSIPDNLLGLSFKVEEASFLAGYLAAKISKTGKIGFLG GMDSMVINAFRYGYEAGAKYANKDVGLTSQYLGSFVDLSLARTIALKMYKDDVDIIFVSAGLAGLGAIEVSKELGDGHYI IGVDQDQSYLAPDNVLTSVIKNVGNSIYEITKDYLNTKSFNGGKLLKLGLKDKAVSIVKNGFKITDELKSEIQIIENKIV NSDIIVPSNFDKYNNFLNIHIY
Sequences:
>Translated_342_residues MNKFMVLICVILIFLGCSKKTSILGTSGKALISLIVDGTFDDKSFGEDAWRGAKVLEDEFEVEIVGRASTSSAYAGDLES LKDRGSDIIWGVGFRLQESIEHAALLNRDIIYGAVDVIYEDDTSIPDNLLGLSFKVEEASFLAGYLAAKISKTGKIGFLG GMDSMVINAFRYGYEAGAKYANKDVGLTSQYLGSFVDLSLARTIALKMYKDDVDIIFVSAGLAGLGAIEVSKELGDGHYI IGVDQDQSYLAPDNVLTSVIKNVGNSIYEITKDYLNTKSFNGGKLLKLGLKDKAVSIVKNGFKITDELKSEIQIIENKIV NSDIIVPSNFDKYNNFLNIHIY >Mature_342_residues MNKFMVLICVILIFLGCSKKTSILGTSGKALISLIVDGTFDDKSFGEDAWRGAKVLEDEFEVEIVGRASTSSAYAGDLES LKDRGSDIIWGVGFRLQESIEHAALLNRDIIYGAVDVIYEDDTSIPDNLLGLSFKVEEASFLAGYLAAKISKTGKIGFLG GMDSMVINAFRYGYEAGAKYANKDVGLTSQYLGSFVDLSLARTIALKMYKDDVDIIFVSAGLAGLGAIEVSKELGDGHYI IGVDQDQSYLAPDNVLTSVIKNVGNSIYEITKDYLNTKSFNGGKLLKLGLKDKAVSIVKNGFKITDELKSEIQIIENKIV NSDIIVPSNFDKYNNFLNIHIY
Specific function: Not known; immunogenic protein [H]
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 37308; Mature: 37308
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFMVLICVILIFLGCSKKTSILGTSGKALISLIVDGTFDDKSFGEDAWRGAKVLEDEF CCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCHHHCCCHHHCCCC EVEIVGRASTSSAYAGDLESLKDRGSDIIWGVGFRLQESIEHAALLNRDIIYGAVDVIYE EEEEEECCCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEE DDTSIPDNLLGLSFKVEEASFLAGYLAAKISKTGKIGFLGGMDSMVINAFRYGYEAGAKY CCCCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCC ANKDVGLTSQYLGSFVDLSLARTIALKMYKDDVDIIFVSAGLAGLGAIEVSKELGDGHYI CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEHHHCCCCEEE IGVDQDQSYLAPDNVLTSVIKNVGNSIYEITKDYLNTKSFNGGKLLKLGLKDKAVSIVKN EEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHC GFKITDELKSEIQIIENKIVNSDIIVPSNFDKYNNFLNIHIY CCEEHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCEEEEEEC >Mature Secondary Structure MNKFMVLICVILIFLGCSKKTSILGTSGKALISLIVDGTFDDKSFGEDAWRGAKVLEDEF CCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCHHHCCCHHHCCCC EVEIVGRASTSSAYAGDLESLKDRGSDIIWGVGFRLQESIEHAALLNRDIIYGAVDVIYE EEEEEECCCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEE DDTSIPDNLLGLSFKVEEASFLAGYLAAKISKTGKIGFLGGMDSMVINAFRYGYEAGAKY CCCCCCCHHHCCEEEECHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCC ANKDVGLTSQYLGSFVDLSLARTIALKMYKDDVDIIFVSAGLAGLGAIEVSKELGDGHYI CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEHHHCCCCEEE IGVDQDQSYLAPDNVLTSVIKNVGNSIYEITKDYLNTKSFNGGKLLKLGLKDKAVSIVKN EEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHC GFKITDELKSEIQIIENKIVNSDIIVPSNFDKYNNFLNIHIY CCEEHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8050720; 8978084; 9403685; 7812434 [H]