| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
Click here to switch to the map view.
The map label for this gene is bmpC [H]
Identifier: 203284295
GI number: 203284295
Start: 405862
End: 406932
Strand: Reverse
Name: bmpC [H]
Synonym: BDU_377
Alternate gene names: 203284295
Gene position: 406932-405862 (Counterclockwise)
Preceding gene: 203284296
Following gene: 203284294
Centisome position: 43.68
GC content: 30.91
Gene sequence:
>1071_bases ATGTCTAAAAATTTATCTTTCATTTTACTTTTTGTTTTAATGTTCATATCTTGCTTTTTTTCAAAAAATAAGTTTGCTAG AAGTGTTGATGATCAGATTGTTATTGGACTTGTGGCTCCGGGTAGTTTTGATGATGAGGGTTATTTTCAAAGTTTTCTTG ATGGTGTTATGGATATAAAAAATGAATTTGGAACTAAAGTTATTCCAAAAGTTATAACACCTTATCCTTCTGAAGAAAAA ATGTTGATGACTGCTAGTGAATTGTTGTCGGAAGATGTTTTCGCATTACAAAACAAGGGGGCTAATTTGGTTTGGTTTAT TGGTGCTTCTTTTTCAGATTCTGTGATAAGATTTGCTCATGAGAATTTTAATGTTTTGTATGGAATTATCGATCCTTTGC ATTATGAAAATATTTTGATTCCACAAAATTTTGTAGCTATTAATTTTAGATCAGAGGAGGGTTCATTTTTAGCTGGATAT TTAGCTTCTAAGATGAGTAAAAGTAATAGAATTGGATTTGTAACAGGTGTTAATATGGATTATGTTGAGAGATTTGTGAT TGGATTTAGAGCAGGAGCATTTTATGCAAATCCTACAACAAGAGTAATTGTAAAGAGAATGTTGGATGAAGTTGATAAAG TTGCTGGCAAATTGTTTGCTGAACATATGTATGTTGAGGATGGTGTTGACATTATTTTTCCTGTCATGGGGCCTGCTTCA CTTGGTATGTTTAAAGCTGCCAAAGAACTTGGAGTTGGACATTATATTATTGGAGTTAATAAGGATCAATCATATCTTGC ACCCGGTCATGTTATTACTTCTGTAATAAAGGATGTTGGGCAAGCAATACACGATTATTCAGCAAATTTGATAAAAAATC ATAAATTTGCTGGTGGTAAAGTTTTTGATTTAGGACTTGAAGACAATGTTATAGATATTATTAAAGATCCTGATATTATT GATAGTGGGCTTATTGATGTTCTTATAGAAATTCAAACTAAGATAATTAAAAAGGAATTAATTGTTCCTTCTACTGAACA TGAATTTGATTTATTTAAGGCAAGGTTATAG
Upstream 100 bases:
>100_bases TATTTTTATCTTCTGAATAAATTTTGTATTTATAAATTTTTGTTTTAGAATTAAAAAATTGTTTACTTAAAAGTTATTTT GTATAAGGAGAGGATAAGTT
Downstream 100 bases:
>100_bases ACTTTAATTATATTGGGGATTGTATTGGCTTAACTTAGCTTAAAGAGGAGATATATGTGATTAATTTATTGTTAGTGTTA TGTTTGTTGTATTTTTCGTG
Product: basic membrane protein C
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSKNLSFILLFVLMFISCFFSKNKFARSVDDQIVIGLVAPGSFDDEGYFQSFLDGVMDIKNEFGTKVIPKVITPYPSEEK MLMTASELLSEDVFALQNKGANLVWFIGASFSDSVIRFAHENFNVLYGIIDPLHYENILIPQNFVAINFRSEEGSFLAGY LASKMSKSNRIGFVTGVNMDYVERFVIGFRAGAFYANPTTRVIVKRMLDEVDKVAGKLFAEHMYVEDGVDIIFPVMGPAS LGMFKAAKELGVGHYIIGVNKDQSYLAPGHVITSVIKDVGQAIHDYSANLIKNHKFAGGKVFDLGLEDNVIDIIKDPDII DSGLIDVLIEIQTKIIKKELIVPSTEHEFDLFKARL
Sequences:
>Translated_356_residues MSKNLSFILLFVLMFISCFFSKNKFARSVDDQIVIGLVAPGSFDDEGYFQSFLDGVMDIKNEFGTKVIPKVITPYPSEEK MLMTASELLSEDVFALQNKGANLVWFIGASFSDSVIRFAHENFNVLYGIIDPLHYENILIPQNFVAINFRSEEGSFLAGY LASKMSKSNRIGFVTGVNMDYVERFVIGFRAGAFYANPTTRVIVKRMLDEVDKVAGKLFAEHMYVEDGVDIIFPVMGPAS LGMFKAAKELGVGHYIIGVNKDQSYLAPGHVITSVIKDVGQAIHDYSANLIKNHKFAGGKVFDLGLEDNVIDIIKDPDII DSGLIDVLIEIQTKIIKKELIVPSTEHEFDLFKARL >Mature_355_residues SKNLSFILLFVLMFISCFFSKNKFARSVDDQIVIGLVAPGSFDDEGYFQSFLDGVMDIKNEFGTKVIPKVITPYPSEEKM LMTASELLSEDVFALQNKGANLVWFIGASFSDSVIRFAHENFNVLYGIIDPLHYENILIPQNFVAINFRSEEGSFLAGYL ASKMSKSNRIGFVTGVNMDYVERFVIGFRAGAFYANPTTRVIVKRMLDEVDKVAGKLFAEHMYVEDGVDIIFPVMGPASL GMFKAAKELGVGHYIIGVNKDQSYLAPGHVITSVIKDVGQAIHDYSANLIKNHKFAGGKVFDLGLEDNVIDIIKDPDIID SGLIDVLIEIQTKIIKKELIVPSTEHEFDLFKARL
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 39685; Mature: 39554
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNLSFILLFVLMFISCFFSKNKFARSVDDQIVIGLVAPGSFDDEGYFQSFLDGVMDIK CCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH NEFGTKVIPKVITPYPSEEKMLMTASELLSEDVFALQNKGANLVWFIGASFSDSVIRFAH HHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH ENFNVLYGIIDPLHYENILIPQNFVAINFRSEEGSFLAGYLASKMSKSNRIGFVTGVNMD CCCEEEEEECCCCCCCCEECCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHH YVERFVIGFRAGAFYANPTTRVIVKRMLDEVDKVAGKLFAEHMYVEDGVDIIFPVMGPAS HHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHH LGMFKAAKELGVGHYIIGVNKDQSYLAPGHVITSVIKDVGQAIHDYSANLIKNHKFAGGK HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VFDLGLEDNVIDIIKDPDIIDSGLIDVLIEIQTKIIKKELIVPSTEHEFDLFKARL EEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC >Mature Secondary Structure SKNLSFILLFVLMFISCFFSKNKFARSVDDQIVIGLVAPGSFDDEGYFQSFLDGVMDIK CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH NEFGTKVIPKVITPYPSEEKMLMTASELLSEDVFALQNKGANLVWFIGASFSDSVIRFAH HHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH ENFNVLYGIIDPLHYENILIPQNFVAINFRSEEGSFLAGYLASKMSKSNRIGFVTGVNMD CCCEEEEEECCCCCCCCEECCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHH YVERFVIGFRAGAFYANPTTRVIVKRMLDEVDKVAGKLFAEHMYVEDGVDIIFPVMGPAS HHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHH LGMFKAAKELGVGHYIIGVNKDQSYLAPGHVITSVIKDVGQAIHDYSANLIKNHKFAGGK HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VFDLGLEDNVIDIIKDPDIIDSGLIDVLIEIQTKIIKKELIVPSTEHEFDLFKARL EEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7988902; 8978084; 9403685; 11136458 [H]