| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284263
Identifier: 203284263
GI number: 203284263
Start: 369011
End: 369688
Strand: Reverse
Name: 203284263
Synonym: BDU_345
Alternate gene names: NA
Gene position: 369688-369011 (Counterclockwise)
Preceding gene: 203284266
Following gene: 203284262
Centisome position: 39.68
GC content: 30.97
Gene sequence:
>678_bases ATGAGTTTTATAATGAACAAAATAAAAAAGATAATATTAATTATATCTCCTTATTTGCTTTTTGCCCAAATATCTGCCAA TCAATATTTTGAGGAGGTTCATTCAAAATATCAAAATGTAAATGATATGCAGGCTAAGATTAGTCTTAATATAAAAGGTC TTAAACAGACAGGAACTTTGTTATATAAATCTCCCGATAAATTTATTATTAATTTAGATTCAAATAATCAGGTCTTTGTG AGTGATGGAGAATTTTTGACCATTTATGTTCCGTCTCTTGGTACTTCTTTTAGACAACAGTTAACTATGGGAAAATCGGG AAGTGGTTTTATGAATATTTTGAGTACTGAGTATAGTGTATCTTATACTAATTCTCCCAATTTAGAACCTCTTGATGAAT CTGGGGGAAGGGGAGGGGCTGAAAATTTTATGAAACTGACTTTTTCAAGACGGCTTTATAAAGGTGCTGCCACAATTGAT TCTTTTATGATTGCCTTTACACCAAGTGGTGCAATTAGAAGAGTTATTGCTTATCCTACAGGTGGTGGTAGAGAAATAGT GATTGATCTTTTGTCTGTCAAGTTTAATGTTGGAATTTCTGATAGTAAATTTAAATATGATCTGCCTAAGAATGCAAATA AGGTGGATAATTTTTTATATGATGTTAAAAAGACCTGA
Upstream 100 bases:
>100_bases AGTTTACAAAATGGTATATTATAAATAATAGCTTATTATGACAAGTTGTACTATTGGTATTTAGAGTTGTATTTGTTATT AAATGTAGCTTAATTAGTGT
Downstream 100 bases:
>100_bases GGTGTTAATATATGGACAGAAGCGATTTCATTAGATTTGGAGATTTTTTAAAAAAAACTCGGATTGATAAGGGCTTTACT TTGGAGATGATAGCTGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSFIMNKIKKIILIISPYLLFAQISANQYFEEVHSKYQNVNDMQAKISLNIKGLKQTGTLLYKSPDKFIINLDSNNQVFV SDGEFLTIYVPSLGTSFRQQLTMGKSGSGFMNILSTEYSVSYTNSPNLEPLDESGGRGGAENFMKLTFSRRLYKGAATID SFMIAFTPSGAIRRVIAYPTGGGREIVIDLLSVKFNVGISDSKFKYDLPKNANKVDNFLYDVKKT
Sequences:
>Translated_225_residues MSFIMNKIKKIILIISPYLLFAQISANQYFEEVHSKYQNVNDMQAKISLNIKGLKQTGTLLYKSPDKFIINLDSNNQVFV SDGEFLTIYVPSLGTSFRQQLTMGKSGSGFMNILSTEYSVSYTNSPNLEPLDESGGRGGAENFMKLTFSRRLYKGAATID SFMIAFTPSGAIRRVIAYPTGGGREIVIDLLSVKFNVGISDSKFKYDLPKNANKVDNFLYDVKKT >Mature_224_residues SFIMNKIKKIILIISPYLLFAQISANQYFEEVHSKYQNVNDMQAKISLNIKGLKQTGTLLYKSPDKFIINLDSNNQVFVS DGEFLTIYVPSLGTSFRQQLTMGKSGSGFMNILSTEYSVSYTNSPNLEPLDESGGRGGAENFMKLTFSRRLYKGAATIDS FMIAFTPSGAIRRVIAYPTGGGREIVIDLLSVKFNVGISDSKFKYDLPKNANKVDNFLYDVKKT
Specific function: Unknown
COG id: COG2834
COG function: function code M; Outer membrane lipoprotein-sorting protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25144; Mature: 25013
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIMNKIKKIILIISPYLLFAQISANQYFEEVHSKYQNVNDMQAKISLNIKGLKQTGTL CHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEE LYKSPDKFIINLDSNNQVFVSDGEFLTIYVPSLGTSFRQQLTMGKSGSGFMNILSTEYSV EEECCCEEEEEECCCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEECEEEE SYTNSPNLEPLDESGGRGGAENFMKLTFSRRLYKGAATIDSFMIAFTPSGAIRRVIAYPT EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHEEEEEECCCHHHEEEEEECC GGGREIVIDLLSVKFNVGISDSKFKYDLPKNANKVDNFLYDVKKT CCCCEEEEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure SFIMNKIKKIILIISPYLLFAQISANQYFEEVHSKYQNVNDMQAKISLNIKGLKQTGTL HHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCEE LYKSPDKFIINLDSNNQVFVSDGEFLTIYVPSLGTSFRQQLTMGKSGSGFMNILSTEYSV EEECCCEEEEEECCCCEEEEECCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEECEEEE SYTNSPNLEPLDESGGRGGAENFMKLTFSRRLYKGAATIDSFMIAFTPSGAIRRVIAYPT EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHEEEEEECCCHHHEEEEEECC GGGREIVIDLLSVKFNVGISDSKFKYDLPKNANKVDNFLYDVKKT CCCCEEEEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA