| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
Click here to switch to the map view.
The map label for this gene is 203284238
Identifier: 203284238
GI number: 203284238
Start: 338372
End: 339304
Strand: Reverse
Name: 203284238
Synonym: BDU_320
Alternate gene names: NA
Gene position: 339304-338372 (Counterclockwise)
Preceding gene: 203284239
Following gene: 203284237
Centisome position: 36.42
GC content: 25.4
Gene sequence:
>933_bases ATGAATACATTTAGAAAAGAATATATTTTATTTATGTTTTCTTTTAGTGCGTTATGTATTAGTTATTTTTTTGATGGATT TTTTAGTTTTTCTTACATAAAAGTAATTTTATGGAATTTTATGTTGTTATTGTTAGTTGCAACAGGAATTTCAACTTGTG CTAAGAGTAATAGTTTAACTCTTGGTGATGAGGGTCAGGTTTATTTTGGAGCGTTTTTGTCTTATGTGTTTTGTGATTTT TGTGGGCTTACATACTTTAATTTTATATTAATAATGTTTTTAAGTTCATTATTAGTTGGACTTATAGGTATAGTTCCTTT TTTATTAACATTTTTTTGTGGAGTAAATGGTATGCTTACTGGTCTTTTGATGTCTTATGGAAATCAAAGGTTGGTGGATG GGTTTATATCAAAGCTTTTAAGTTCAAATGAACTTTTAAGTCAAACTAAAAGTATTAATAAAATATTTGCTCGTGATGTT GCTTTACCATATTTGCTTGTATTTAGTCTGTTAATTTGGGGATGTTATGTATTTATTCATAAAAGAACTATTTTGGGATT AAAACTTGAAATATTGAGTGATCGAAAAACATTAAGTAAATTTTTTAGTATTAATGAATTTAAATATAAGTTTTGTACAG TGTTTACCAGTGCTTTTTTAAATGGTCTTGTAGGTGCAATATTTGTAATTTTTTTTAAGAATTATTTGTTTTTAAGTTTA ACTTCTGGACTTGGTTGGAATGGCTTTGTTGTTGCTGTGGTTTCGGGGTTTAATTATATTTATGTGTTATGTTTTAGTTT GTTTTTTGCAATGTTGAACGAATTTAATAATTATCTTAAAATAAATTATTCATTTAAGTATGAATTTATTGGTTTATATC AGGCCATTTCTATTTTCATTGCATTGTTTTTTATTAATACGGGTAAAAAGTAG
Upstream 100 bases:
>100_bases TTTTATCTGATGATATTTTGGCAATAAAAACAGGGGAGGTCGTGTTGAGATTAAAAAGAGAATATGTCGATAAGTCAACC TTAAAGGAAATGTTATTTGT
Downstream 100 bases:
>100_bases GTGTTTAGTATTTTTTTGCATTCTATAATATTTGCATATTTAGCTCTTGGTATTCTTTATACTGAGAGAGTAGGGCTTTT AAATATATCTATAGAGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Permease Of Sugar ABC Transporter; Nucleoside Transport System Permease Protein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MNTFRKEYILFMFSFSALCISYFFDGFFSFSYIKVILWNFMLLLLVATGISTCAKSNSLTLGDEGQVYFGAFLSYVFCDF CGLTYFNFILIMFLSSLLVGLIGIVPFLLTFFCGVNGMLTGLLMSYGNQRLVDGFISKLLSSNELLSQTKSINKIFARDV ALPYLLVFSLLIWGCYVFIHKRTILGLKLEILSDRKTLSKFFSINEFKYKFCTVFTSAFLNGLVGAIFVIFFKNYLFLSL TSGLGWNGFVVAVVSGFNYIYVLCFSLFFAMLNEFNNYLKINYSFKYEFIGLYQAISIFIALFFINTGKK
Sequences:
>Translated_310_residues MNTFRKEYILFMFSFSALCISYFFDGFFSFSYIKVILWNFMLLLLVATGISTCAKSNSLTLGDEGQVYFGAFLSYVFCDF CGLTYFNFILIMFLSSLLVGLIGIVPFLLTFFCGVNGMLTGLLMSYGNQRLVDGFISKLLSSNELLSQTKSINKIFARDV ALPYLLVFSLLIWGCYVFIHKRTILGLKLEILSDRKTLSKFFSINEFKYKFCTVFTSAFLNGLVGAIFVIFFKNYLFLSL TSGLGWNGFVVAVVSGFNYIYVLCFSLFFAMLNEFNNYLKINYSFKYEFIGLYQAISIFIALFFINTGKK >Mature_310_residues MNTFRKEYILFMFSFSALCISYFFDGFFSFSYIKVILWNFMLLLLVATGISTCAKSNSLTLGDEGQVYFGAFLSYVFCDF CGLTYFNFILIMFLSSLLVGLIGIVPFLLTFFCGVNGMLTGLLMSYGNQRLVDGFISKLLSSNELLSQTKSINKIFARDV ALPYLLVFSLLIWGCYVFIHKRTILGLKLEILSDRKTLSKFFSINEFKYKFCTVFTSAFLNGLVGAIFVIFFKNYLFLSL TSGLGWNGFVVAVVSGFNYIYVLCFSLFFAMLNEFNNYLKINYSFKYEFIGLYQAISIFIALFFINTGKK
Specific function: Unknown
COG id: COG4603
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35446; Mature: 35446
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFRKEYILFMFSFSALCISYFFDGFFSFSYIKVILWNFMLLLLVATGISTCAKSNSLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LGDEGQVYFGAFLSYVFCDFCGLTYFNFILIMFLSSLLVGLIGIVPFLLTFFCGVNGMLT ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH GLLMSYGNQRLVDGFISKLLSSNELLSQTKSINKIFARDVALPYLLVFSLLIWGCYVFIH HHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRTILGLKLEILSDRKTLSKFFSINEFKYKFCTVFTSAFLNGLVGAIFVIFFKNYLFLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSGLGWNGFVVAVVSGFNYIYVLCFSLFFAMLNEFNNYLKINYSFKYEFIGLYQAISIFI HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHH ALFFINTGKK HHHHHHCCCC >Mature Secondary Structure MNTFRKEYILFMFSFSALCISYFFDGFFSFSYIKVILWNFMLLLLVATGISTCAKSNSLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LGDEGQVYFGAFLSYVFCDFCGLTYFNFILIMFLSSLLVGLIGIVPFLLTFFCGVNGMLT ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH GLLMSYGNQRLVDGFISKLLSSNELLSQTKSINKIFARDVALPYLLVFSLLIWGCYVFIH HHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRTILGLKLEILSDRKTLSKFFSINEFKYKFCTVFTSAFLNGLVGAIFVIFFKNYLFLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSGLGWNGFVVAVVSGFNYIYVLCFSLFFAMLNEFNNYLKINYSFKYEFIGLYQAISIFI HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHH ALFFINTGKK HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA