| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284229
Identifier: 203284229
GI number: 203284229
Start: 330321
End: 331409
Strand: Reverse
Name: 203284229
Synonym: BDU_311
Alternate gene names: NA
Gene position: 331409-330321 (Counterclockwise)
Preceding gene: 203284230
Following gene: 203284228
Centisome position: 35.57
GC content: 22.59
Gene sequence:
>1089_bases TTGGGAGAGGACGTAATAAATATGCATCTTTATAGAGAAAGTTCAACGAAATTTATCAAAATGAGATTTTTCTTCTTGTC GATTTTTTTGTTGATATTTATCATATTAGTTAATTCTTTATTGCGGGTAACAATTGATGTTTCGACTTCTTATAAATTTA ATCATTTTGCAAAATATGATAATTTGGTTGAAATGTTTTCAAATAATAATGTTTTTATGCAAGATCAAATCTTAAATCTA GATTTAAATAAATATTATTATCATGTTATAAATGATCGTTTGGTTAGTTTTTCTGAGCATTATTATGTACTTGGTGAATC CCAAAATAATTATTCTATATATTCTAAAAATACAAATAAATTTTTATTTTCTTTATCATATAAAGATCTTGTATTTACAA AAGGTGATGCTATTTTTGCTTTAAATAATTTATATAAAACTTTAGAAGTTTATGGAGAAGATGGGAGTCAAATTTTTTCT TTTAAATTTGTAGCCTCAATATTAAGTGTTGATTATAATGATGGTGTTTTGGTTTTAGGGGCATCTGATGGAAATGTTTA TGTATATAAGCATGGAAATTGTATTTATAGTGGTGATTTATTAGATCTTGGTTTGCCCATTATATGTGTTAAATTAAGCT TAGATAACAAATATTTATGTATTTTAAGGCAGAATGAATTTTATTCTTTAGAGGTAATTAATTTAGATCATGGATATAAT CAGGTTTTATCTTTAAAAGATTTAAAGATAAAAGATTTTAATCCTTTTTTTAAGATAGATAAATTTTATAATTTGTTTAT TAAAACTTTCGATTCCTTTTTAATACTTAATATTAAGAGTGGTAAAACTTTTAGGATTAATGATGAAAATTCTGTTTTGC AAGCTTGTTATGATTCTTTATCAAATACATATAGAATATATTTTTATGATTTAAATAGTAGTATAATCAATATAAGGACT TATTCTGTAAATTCTTATAGGTTGTTTGATAATATCTTTTTCAAAGATAAGGTAAGGTCGTATGTTGAATTTGATAAAGG GATTTTATATTTTAATGATAAGAGTGATTTAAAATACTTAGGACTTTAA
Upstream 100 bases:
>100_bases ACTTCTCAAAAGGAGATGGCTGAAAAATTTTCTAAATTTTATGAAGTATGGTCTGTTAAATTTAAGTCTGATTTAAGCAA AAATAAATAGAATTTAAGGA
Downstream 100 bases:
>100_bases ATAATGATAATTATTTTTCTTTTTTTATTTAGTATATCTAATTTATATTCATTTTTAGAATTTGGCAAGGATGAAAAATT TGATTTGATTGATGATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MGEDVINMHLYRESSTKFIKMRFFFLSIFLLIFIILVNSLLRVTIDVSTSYKFNHFAKYDNLVEMFSNNNVFMQDQILNL DLNKYYYHVINDRLVSFSEHYYVLGESQNNYSIYSKNTNKFLFSLSYKDLVFTKGDAIFALNNLYKTLEVYGEDGSQIFS FKFVASILSVDYNDGVLVLGASDGNVYVYKHGNCIYSGDLLDLGLPIICVKLSLDNKYLCILRQNEFYSLEVINLDHGYN QVLSLKDLKIKDFNPFFKIDKFYNLFIKTFDSFLILNIKSGKTFRINDENSVLQACYDSLSNTYRIYFYDLNSSIINIRT YSVNSYRLFDNIFFKDKVRSYVEFDKGILYFNDKSDLKYLGL
Sequences:
>Translated_362_residues MGEDVINMHLYRESSTKFIKMRFFFLSIFLLIFIILVNSLLRVTIDVSTSYKFNHFAKYDNLVEMFSNNNVFMQDQILNL DLNKYYYHVINDRLVSFSEHYYVLGESQNNYSIYSKNTNKFLFSLSYKDLVFTKGDAIFALNNLYKTLEVYGEDGSQIFS FKFVASILSVDYNDGVLVLGASDGNVYVYKHGNCIYSGDLLDLGLPIICVKLSLDNKYLCILRQNEFYSLEVINLDHGYN QVLSLKDLKIKDFNPFFKIDKFYNLFIKTFDSFLILNIKSGKTFRINDENSVLQACYDSLSNTYRIYFYDLNSSIINIRT YSVNSYRLFDNIFFKDKVRSYVEFDKGILYFNDKSDLKYLGL >Mature_361_residues GEDVINMHLYRESSTKFIKMRFFFLSIFLLIFIILVNSLLRVTIDVSTSYKFNHFAKYDNLVEMFSNNNVFMQDQILNLD LNKYYYHVINDRLVSFSEHYYVLGESQNNYSIYSKNTNKFLFSLSYKDLVFTKGDAIFALNNLYKTLEVYGEDGSQIFSF KFVASILSVDYNDGVLVLGASDGNVYVYKHGNCIYSGDLLDLGLPIICVKLSLDNKYLCILRQNEFYSLEVINLDHGYNQ VLSLKDLKIKDFNPFFKIDKFYNLFIKTFDSFLILNIKSGKTFRINDENSVLQACYDSLSNTYRIYFYDLNSSIINIRTY SVNSYRLFDNIFFKDKVRSYVEFDKGILYFNDKSDLKYLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42531; Mature: 42400
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEDVINMHLYRESSTKFIKMRFFFLSIFLLIFIILVNSLLRVTIDVSTSYKFNHFAKYD CCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHH NLVEMFSNNNVFMQDQILNLDLNKYYYHVINDRLVSFSEHYYVLGESQNNYSIYSKNTNK HHHHHHCCCCEEEEEEEEEEEHHHEEEEEECCHHEEECCEEEEEECCCCCEEEEECCCCE FLFSLSYKDLVFTKGDAIFALNNLYKTLEVYGEDGSQIFSFKFVASILSVDYNDGVLVLG EEEEEECCEEEEECCCEEEEEHHHEEEEEEECCCCCEEEHHHHHHHHHHCCCCCCEEEEE ASDGNVYVYKHGNCIYSGDLLDLGLPIICVKLSLDNKYLCILRQNEFYSLEVINLDHGYN CCCCCEEEEECCCEEEECCHHHCCCEEEEEEEECCCEEEEEEECCCEEEEEEEEECCCCC QVLSLKDLKIKDFNPFFKIDKFYNLFIKTFDSFLILNIKSGKTFRINDENSVLQACYDSL CEEEEECCEEECCCCCEEHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHHHHHC SNTYRIYFYDLNSSIINIRTYSVNSYRLFDNIFFKDKVRSYVEFDKGILYFNDKSDLKYL CCEEEEEEEECCCCEEEEEEEEECCEEEEHHHEEHHHHHHHHHHCCCEEEECCCCCEEEE GL CC >Mature Secondary Structure GEDVINMHLYRESSTKFIKMRFFFLSIFLLIFIILVNSLLRVTIDVSTSYKFNHFAKYD CCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHH NLVEMFSNNNVFMQDQILNLDLNKYYYHVINDRLVSFSEHYYVLGESQNNYSIYSKNTNK HHHHHHCCCCEEEEEEEEEEEHHHEEEEEECCHHEEECCEEEEEECCCCCEEEEECCCCE FLFSLSYKDLVFTKGDAIFALNNLYKTLEVYGEDGSQIFSFKFVASILSVDYNDGVLVLG EEEEEECCEEEEECCCEEEEEHHHEEEEEEECCCCCEEEHHHHHHHHHHCCCCCCEEEEE ASDGNVYVYKHGNCIYSGDLLDLGLPIICVKLSLDNKYLCILRQNEFYSLEVINLDHGYN CCCCCEEEEECCCEEEECCHHHCCCEEEEEEEECCCEEEEEEECCCEEEEEEEEECCCCC QVLSLKDLKIKDFNPFFKIDKFYNLFIKTFDSFLILNIKSGKTFRINDENSVLQACYDSL CEEEEECCEEECCCCCEEHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHHHHHC SNTYRIYFYDLNSSIINIRTYSVNSYRLFDNIFFKDKVRSYVEFDKGILYFNDKSDLKYL CCEEEEEEEECCCCEEEEEEEEECCEEEEHHHEEHHHHHHHHHHCCCEEEECCCCCEEEE GL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA