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The map label for this gene is flhF [H]

Identifier: 203284191

GI number: 203284191

Start: 296932

End: 298113

Strand: Reverse

Name: flhF [H]

Synonym: BDU_273

Alternate gene names: 203284191

Gene position: 298113-296932 (Counterclockwise)

Preceding gene: 203284192

Following gene: 203284190

Centisome position: 32.0

GC content: 27.83

Gene sequence:

>1182_bases
TTGAAGAGTAATATTATGGTTCAGTATTTTACAGAAAGAGGTCCTACTTATAATGAAGTTATAGAAACTGTTAAGAGAAA
GTATGGAAAAAATGCTAGAGTTATGACTTATAAGACAATATCTCATGGAGGAATATTTGGATTATTTAGTAGGGATTGGA
TTGAGGTTTCAGGTTATGTTAGGTATGACATTGGACAACAGCAAATAAATGTTGAGGAAGAAAAACGTAAGATTCTTCAA
AGTATTAAAAAAGAAGAGACTTCTTCAATTGAAGATGTAATTAAGGAAGTTAAATCTCTTAAAAATGAACTTGCACATAA
AAAGGAAGAAATTAATCATCCAACTATTTTAAAAATAGAAGATATTTTACGTAGTAATGATTTTTCTGAAAGTTATATTA
GAGATATTAATAATTTTATTAAAAAGGAATTTAGTTTATCTGATCTTGATGATTATGATAAAGTCAAAGATAGTGTAATA
ATATATATTGCTAAAACTATTAAATGTTCAGGTTCTCTTATTGATAATCTTAAGAAAAGGATTTTTATTTTAGTTGGGCC
AACGGGTGTTGGGAAGACTACTACCATTGCAAAACTTGCAGCGATTTATGGTATTAATAGTGATGATAAGAATTTAAATA
TTAAGATTATTACTATTGATAATTATCGAATAGGTGCTAAAAAACAAATTCAGACGTATGGTGATATTATGGGAATTCCT
GTTAAAGCAATTGAATCTTTTAAAGATTTAAAGGAAGAGATTACACAGTCAAAAGATTTTGATCTTGTTCTTATTGATAC
AATTGGTAAGAGTCCTAAGGACTTTATGAAACTTGCTGAGATGAAAGAACTTCTTAATGCTTGTGGTCGTGATGCTGAAT
TTCATTTGGCTGTAAGTTCTACGACAAAAACATCAGATATAAAAGAAATATTTCATCAGTTTTCTCCTTTTAGTTATAAA
ACTGTGATTTTTACAAAGCTTGATGAGACAACATGTGTTGGTAATTTGATAAGTTTGATTCATGAAATGAGAAAGGAAGT
TTCTTATGTTACTGATGGGCAAATTGTTCCTCATAATATTAGTATTGCAGAACCGCTTACCTTCATTAAAAAAATAAATG
GATATAGAATAAGTGATGATGTTGAATTTATTCGAAAGCTAAAAAGTAAATCTTATTATTAA

Upstream 100 bases:

>100_bases
ATAAGGGTTTTAACAAGTAGAGAGCTTTCAGATGTTGTTGTTATATCTGTTTTAGAGGTTCCTAAAAATGTTAAAGTTAA
TGTACTTAAAACAGTAGAGG

Downstream 100 bases:

>100_bases
GGATAATATATGATGGAAGATCAGGCTCAAAGTTTACGTGATATTATGAGATTAAATAATAAGTCTAGCTTTGTTGTTGA
TGATAAAATACAAAATAATA

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MKSNIMVQYFTERGPTYNEVIETVKRKYGKNARVMTYKTISHGGIFGLFSRDWIEVSGYVRYDIGQQQINVEEEKRKILQ
SIKKEETSSIEDVIKEVKSLKNELAHKKEEINHPTILKIEDILRSNDFSESYIRDINNFIKKEFSLSDLDDYDKVKDSVI
IYIAKTIKCSGSLIDNLKKRIFILVGPTGVGKTTTIAKLAAIYGINSDDKNLNIKIITIDNYRIGAKKQIQTYGDIMGIP
VKAIESFKDLKEEITQSKDFDLVLIDTIGKSPKDFMKLAEMKELLNACGRDAEFHLAVSSTTKTSDIKEIFHQFSPFSYK
TVIFTKLDETTCVGNLISLIHEMRKEVSYVTDGQIVPHNISIAEPLTFIKKINGYRISDDVEFIRKLKSKSYY

Sequences:

>Translated_393_residues
MKSNIMVQYFTERGPTYNEVIETVKRKYGKNARVMTYKTISHGGIFGLFSRDWIEVSGYVRYDIGQQQINVEEEKRKILQ
SIKKEETSSIEDVIKEVKSLKNELAHKKEEINHPTILKIEDILRSNDFSESYIRDINNFIKKEFSLSDLDDYDKVKDSVI
IYIAKTIKCSGSLIDNLKKRIFILVGPTGVGKTTTIAKLAAIYGINSDDKNLNIKIITIDNYRIGAKKQIQTYGDIMGIP
VKAIESFKDLKEEITQSKDFDLVLIDTIGKSPKDFMKLAEMKELLNACGRDAEFHLAVSSTTKTSDIKEIFHQFSPFSYK
TVIFTKLDETTCVGNLISLIHEMRKEVSYVTDGQIVPHNISIAEPLTFIKKINGYRISDDVEFIRKLKSKSYY
>Mature_393_residues
MKSNIMVQYFTERGPTYNEVIETVKRKYGKNARVMTYKTISHGGIFGLFSRDWIEVSGYVRYDIGQQQINVEEEKRKILQ
SIKKEETSSIEDVIKEVKSLKNELAHKKEEINHPTILKIEDILRSNDFSESYIRDINNFIKKEFSLSDLDDYDKVKDSVI
IYIAKTIKCSGSLIDNLKKRIFILVGPTGVGKTTTIAKLAAIYGINSDDKNLNIKIITIDNYRIGAKKQIQTYGDIMGIP
VKAIESFKDLKEEITQSKDFDLVLIDTIGKSPKDFMKLAEMKELLNACGRDAEFHLAVSSTTKTSDIKEIFHQFSPFSYK
TVIFTKLDETTCVGNLISLIHEMRKEVSYVTDGQIVPHNISIAEPLTFIKKINGYRISDDVEFIRKLKSKSYY

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 45029; Mature: 45029

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNIMVQYFTERGPTYNEVIETVKRKYGKNARVMTYKTISHGGIFGLFSRDWIEVSGYV
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCEEEECCEE
RYDIGQQQINVEEEKRKILQSIKKEETSSIEDVIKEVKSLKNELAHKKEEINHPTILKIE
EEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
DILRSNDFSESYIRDINNFIKKEFSLSDLDDYDKVKDSVIIYIAKTIKCSGSLIDNLKKR
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEEEEEEHHHCCHHHHHHHHHE
IFILVGPTGVGKTTTIAKLAAIYGINSDDKNLNIKIITIDNYRIGAKKQIQTYGDIMGIP
EEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCEECCCHHHHHHHHHHCCCC
VKAIESFKDLKEEITQSKDFDLVLIDTIGKSPKDFMKLAEMKELLNACGRDAEFHLAVSS
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
TTKTSDIKEIFHQFSPFSYKTVIFTKLDETTCVGNLISLIHEMRKEVSYVTDGQIVPHNI
CCCHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
SIAEPLTFIKKINGYRISDDVEFIRKLKSKSYY
CHHHHHHHHHHHCCEEECHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSNIMVQYFTERGPTYNEVIETVKRKYGKNARVMTYKTISHGGIFGLFSRDWIEVSGYV
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEECCCCEEEECCEE
RYDIGQQQINVEEEKRKILQSIKKEETSSIEDVIKEVKSLKNELAHKKEEINHPTILKIE
EEECCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
DILRSNDFSESYIRDINNFIKKEFSLSDLDDYDKVKDSVIIYIAKTIKCSGSLIDNLKKR
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEEEEEEHHHCCHHHHHHHHHE
IFILVGPTGVGKTTTIAKLAAIYGINSDDKNLNIKIITIDNYRIGAKKQIQTYGDIMGIP
EEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCEECCCHHHHHHHHHHCCCC
VKAIESFKDLKEEITQSKDFDLVLIDTIGKSPKDFMKLAEMKELLNACGRDAEFHLAVSS
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
TTKTSDIKEIFHQFSPFSYKTVIFTKLDETTCVGNLISLIHEMRKEVSYVTDGQIVPHNI
CCCHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC
SIAEPLTFIKKINGYRISDDVEFIRKLKSKSYY
CHHHHHHHHHHHCCEEECHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9168127; 9403685 [H]