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The map label for this gene is rpmE2 [H]

Identifier: 203284148

GI number: 203284148

Start: 246175

End: 246420

Strand: Reverse

Name: rpmE2 [H]

Synonym: BDU_229

Alternate gene names: 203284148

Gene position: 246420-246175 (Counterclockwise)

Preceding gene: 203284149

Following gene: 203284145

Centisome position: 26.45

GC content: 28.46

Gene sequence:

>246_bases
ATGAAAAAAGATATACATCCTGTTAGTAACTTAGTAGTTTTTAAAGACGGTGCTAATGGTGCCATGTTTTTAACAAGATC
AACTTTAACGTCAAAAGAAGTAATTAAGTATAGTGATAATAAAGAATATCCATTAATTACTGTTGAGATTTCAAGTAAGT
CACATCCTTTTTATACAGGTCAGCAAAAATTTGTGGATGCGGCAGGTAGAATTGACAAATTTAACAAAAAATATAAAAAA
GCTTAA

Upstream 100 bases:

>100_bases
AAACAATGAAATTTTTTTAAAAACCATGAGTAATGGAGATTAATGAAATTGACTTTGTTAATAATTTAGACTAAACTTTG
ATTAAATTAAGAGAGGCTTT

Downstream 100 bases:

>100_bases
TTAATATTTTTTTATTTTTTGTTGTTTTTAATATATTTTTTTTACCCTATATTTTTTGCCAATAAATTTTTCTATCTTTG
TTTTGTCATTCTCATAGATT

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MKKDIHPVSNLVVFKDGANGAMFLTRSTLTSKEVIKYSDNKEYPLITVEISSKSHPFYTGQQKFVDAAGRIDKFNKKYKK
A

Sequences:

>Translated_81_residues
MKKDIHPVSNLVVFKDGANGAMFLTRSTLTSKEVIKYSDNKEYPLITVEISSKSHPFYTGQQKFVDAAGRIDKFNKKYKK
A
>Mature_81_residues
MKKDIHPVSNLVVFKDGANGAMFLTRSTLTSKEVIKYSDNKEYPLITVEISSKSHPFYTGQQKFVDAAGRIDKFNKKYKK
A

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily [H]

Homologues:

Organism=Escherichia coli, GI2367109, Length=80, Percent_Identity=37.5, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002150 [H]

Pfam domain/function: PF01197 Ribosomal_L31 [H]

EC number: NA

Molecular weight: Translated: 9201; Mature: 9201

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDIHPVSNLVVFKDGANGAMFLTRSTLTSKEVIKYSDNKEYPLITVEISSKSHPFYTG
CCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCCEECC
QQKFVDAAGRIDKFNKKYKKA
CHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MKKDIHPVSNLVVFKDGANGAMFLTRSTLTSKEVIKYSDNKEYPLITVEISSKSHPFYTG
CCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCCEECC
QQKFVDAAGRIDKFNKKYKKA
CHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA