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The map label for this gene is gidB

Identifier: 203284098

GI number: 203284098

Start: 188990

End: 189622

Strand: Reverse

Name: gidB

Synonym: BDU_176

Alternate gene names: 203284098

Gene position: 189622-188990 (Counterclockwise)

Preceding gene: 203284099

Following gene: 203284097

Centisome position: 20.35

GC content: 27.33

Gene sequence:

>633_bases
ATGATGACTAATTTTAAATTTGCTTTGAAAAATTTGAAAGTGAATTTTACTTCAGAAAATATTGATAAATTGAGATTTTA
TATAGAGAAAGTTTTATTATTTAGTGATAGGTTTAATTTGGTGTCAAATAATGTTCGCAACTTTGATGCAATGCTTTTAC
ATGCTTTAGATTCTGTTTCTGGATTGCCTATTGTTAAAGATAAAAATCCACGACAAGTACTTGATGTTGGCAGTGGAGCT
GGGTTTCCAGGAATTGTTTTAGCCCTTTTTGATCGTTGTAGAAAATATGTTCTTCTTGAGCGTAGTAATAAAAAAGCCAT
TTTTTTAAAAATGATTAGTTTGGAACTTGGTTTAGAGAATGTGGAGGTTTTAGAGCATAATGTTGAGGAGGAACAAAATA
AATATGAATTTATTACAATCAGGGCTTTTGGAGATATAAGAAAATATGCAAATATTTTAGGCTCAATTTTGAAATCTGGT
GGTTTAATTATGGCTTATAAAGGGAAATTTGATAAGGTTGAATTTGAAATGAGTTATGTTAAAAATTTATTTGATAAAGT
AGAAATAAAATCATCAGAATTGATTTCTGATAAAGAGAGATATTTCCTTTTACTTTATGATTATAAATGTTAA

Upstream 100 bases:

>100_bases
CTCAGGCAAGTAGGGTTTCTGGGGTTAGGAATACTGATATTCAAGTTTTGCTTATATATTTTTCAAACCCTAAAAATAAA
GTAGTACTTAATTTAGATTT

Downstream 100 bases:

>100_bases
TTTTATTTCTAGGTTTTTAGTTTATATTTTGTTTTTTGTAGCAAGGAAATTTAGTACGATAGGAGTGGTATGAAAAATAG
TTTTCAAATAGATTCTGAAG

Product: glucose inhibited division protein B

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MMTNFKFALKNLKVNFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLLHALDSVSGLPIVKDKNPRQVLDVGSGA
GFPGIVLALFDRCRKYVLLERSNKKAIFLKMISLELGLENVEVLEHNVEEEQNKYEFITIRAFGDIRKYANILGSILKSG
GLIMAYKGKFDKVEFEMSYVKNLFDKVEIKSSELISDKERYFLLLYDYKC

Sequences:

>Translated_210_residues
MMTNFKFALKNLKVNFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLLHALDSVSGLPIVKDKNPRQVLDVGSGA
GFPGIVLALFDRCRKYVLLERSNKKAIFLKMISLELGLENVEVLEHNVEEEQNKYEFITIRAFGDIRKYANILGSILKSG
GLIMAYKGKFDKVEFEMSYVKNLFDKVEIKSSELISDKERYFLLLYDYKC
>Mature_210_residues
MMTNFKFALKNLKVNFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLLHALDSVSGLPIVKDKNPRQVLDVGSGA
GFPGIVLALFDRCRKYVLLERSNKKAIFLKMISLELGLENVEVLEHNVEEEQNKYEFITIRAFGDIRKYANILGSILKSG
GLIMAYKGKFDKVEFEMSYVKNLFDKVEIKSSELISDKERYFLLLYDYKC

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

Organism=Escherichia coli, GI1790179, Length=180, Percent_Identity=27.2222222222222, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_BORDL (B5RL03)

Other databases:

- EMBL:   CP000976
- RefSeq:   YP_002221838.1
- ProteinModelPortal:   B5RL03
- EnsemblBacteria:   EBBORT00000000920
- GeneID:   6918260
- GenomeReviews:   CP000976_GR
- KEGG:   bdu:BDU_176
- GeneTree:   EBGT00050000006839
- HOGENOM:   HBG354388
- OMA:   FITIRAF
- ProtClustDB:   CLSK507412
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: 2.1.-.- [C]

Molecular weight: Translated: 24326; Mature: 24326

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTNFKFALKNLKVNFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLLHALDSVS
CCCCHHHHEEHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
GLPIVKDKNPRQVLDVGSGAGFPGIVLALFDRCRKYVLLERSNKKAIFLKMISLELGLEN
CCCEEECCCCHHEEECCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEEEEHHHCCCH
VEVLEHNVEEEQNKYEFITIRAFGDIRKYANILGSILKSGGLIMAYKGKFDKVEFEMSYV
HHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
KNLFDKVEIKSSELISDKERYFLLLYDYKC
HHHHHHHHCCCHHHCCCCCEEEEEEEECCC
>Mature Secondary Structure
MMTNFKFALKNLKVNFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLLHALDSVS
CCCCHHHHEEHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
GLPIVKDKNPRQVLDVGSGAGFPGIVLALFDRCRKYVLLERSNKKAIFLKMISLELGLEN
CCCEEECCCCHHEEECCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEEEEHHHCCCH
VEVLEHNVEEEQNKYEFITIRAFGDIRKYANILGSILKSGGLIMAYKGKFDKVEFEMSYV
HHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
KNLFDKVEIKSSELISDKERYFLLLYDYKC
HHHHHHHHCCCHHHCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA