| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284092
Identifier: 203284092
GI number: 203284092
Start: 183585
End: 184172
Strand: Reverse
Name: 203284092
Synonym: BDU_170
Alternate gene names: NA
Gene position: 184172-183585 (Counterclockwise)
Preceding gene: 203284093
Following gene: 203284091
Centisome position: 19.77
GC content: 28.74
Gene sequence:
>588_bases ATGGGACGATACTTTTTAATTCATTTATTAATAAGTTTTATATGTGCATTTTGTTTATCTTGTTCAAATGTTAAAGCTAT GTCTCTTATGGCCATTGGTAATTATAGGTATATTAGAGGTGATTATCAGAGTGCAATTTCTACCTATTATAATCTTGTAG ATGATAATAAGAGTGCTGCATGGGGTTATTATAATCTTGGAATTGTATATTATTCTTTGGGAGAGTATGAAAGCTCTCTT CGGATGTTTTCGTATGCAAGAAGAGATGATGATTTTTTTTTGAATTTTAATATAAGTTATAATGAGGGGATAATATATTA CAATCAGGGACTTTATCGAAAAGCAGAAGTGGCATTTAAAGAAGCTTTAAAGATTAATCCTGCAAGTTATAATGCTAAGT ATAATCTTGAACTTGCAATAATTAAAAAAAGGACTATGCCAGGAAATTTAAATAATTTAAGTATTAGTAAGAGTCAAAAT TTTATTGAAAATAATGAAAATTTTTTGAGGTATATTGAAAATCTTGAGAGGGTTTTATGGGTAATGCGGGCAGACGAGCA AATTGTTTCTTTGCAAGAAGATTGGTAA
Upstream 100 bases:
>100_bases GTTCAAGTAATATTTTATTAATTGGCATTTTAAGATACAAGCTTTTTTTAGCTGTTTCTTTTTTATTTATGATGTTGTAT ATATTTGTTAAGGTTATTAA
Downstream 100 bases:
>100_bases TATTTTTAATTTTATTTCTAGTACATTTAAAAATTTATTCTTTATCTGGTACTGATTATTTAATATCTTCCAAGATTGTT AAAGGTTCTAAGATTATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MGRYFLIHLLISFICAFCLSCSNVKAMSLMAIGNYRYIRGDYQSAISTYYNLVDDNKSAAWGYYNLGIVYYSLGEYESSL RMFSYARRDDDFFLNFNISYNEGIIYYNQGLYRKAEVAFKEALKINPASYNAKYNLELAIIKKRTMPGNLNNLSISKSQN FIENNENFLRYIENLERVLWVMRADEQIVSLQEDW
Sequences:
>Translated_195_residues MGRYFLIHLLISFICAFCLSCSNVKAMSLMAIGNYRYIRGDYQSAISTYYNLVDDNKSAAWGYYNLGIVYYSLGEYESSL RMFSYARRDDDFFLNFNISYNEGIIYYNQGLYRKAEVAFKEALKINPASYNAKYNLELAIIKKRTMPGNLNNLSISKSQN FIENNENFLRYIENLERVLWVMRADEQIVSLQEDW >Mature_194_residues GRYFLIHLLISFICAFCLSCSNVKAMSLMAIGNYRYIRGDYQSAISTYYNLVDDNKSAAWGYYNLGIVYYSLGEYESSLR MFSYARRDDDFFLNFNISYNEGIIYYNQGLYRKAEVAFKEALKINPASYNAKYNLELAIIKKRTMPGNLNNLSISKSQNF IENNENFLRYIENLERVLWVMRADEQIVSLQEDW
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22913; Mature: 22782
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYFLIHLLISFICAFCLSCSNVKAMSLMAIGNYRYIRGDYQSAISTYYNLVDDNKSAA CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCHHHHHHHHHHHHHCCCCCCE WGYYNLGIVYYSLGEYESSLRMFSYARRDDDFFLNFNISYNEGIIYYNQGLYRKAEVAFK EEEEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHH EALKINPASYNAKYNLELAIIKKRTMPGNLNNLSISKSQNFIENNENFLRYIENLERVLW HHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEECCCCCHHHCCHHHHHHHHHHHHHHH VMRADEQIVSLQEDW HHCCCHHHEECCCCC >Mature Secondary Structure GRYFLIHLLISFICAFCLSCSNVKAMSLMAIGNYRYIRGDYQSAISTYYNLVDDNKSAA CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCHHHHHHHHHHHHHCCCCCCE WGYYNLGIVYYSLGEYESSLRMFSYARRDDDFFLNFNISYNEGIIYYNQGLYRKAEVAFK EEEEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCCCHHHHHHHH EALKINPASYNAKYNLELAIIKKRTMPGNLNNLSISKSQNFIENNENFLRYIENLERVLW HHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEECCCCCHHHCCHHHHHHHHHHHHHHH VMRADEQIVSLQEDW HHCCCHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA