| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is malQ [H]
Identifier: 203284087
GI number: 203284087
Start: 177972
End: 179456
Strand: Reverse
Name: malQ [H]
Synonym: BDU_165
Alternate gene names: 203284087
Gene position: 179456-177972 (Counterclockwise)
Preceding gene: 203284089
Following gene: 203284086
Centisome position: 19.26
GC content: 28.69
Gene sequence:
>1485_bases ATGAAAAGAAAAAGTGGAATTTTGCTAAGTATTAGTTCTTTACCGTCTCAGTATGGTATTGGTGATTTGGGGAAGGGAGC ATATGAATTTATAGATTTTCTTGCTAGTTCGTCGCAAAGTTATTGGCAAATATTGTTGTATTCACTTCCTAATTGTTCAG GGGTTCCTTATTTAAGTTATTCTGCATTTGCTGGTAATATAAGTTATATTGATTTAAATGCTATTGATAGATTTATCGAT GTAGATTTAGGTATTTTTGGATGTTTGGAAGATAGATGTATTGATTATGATAAATTGAAAACCAAGAATATTATTTTAAG AGATGCAGCTTTGAATTTTTTGCATAGGGCGACAATTGATGAGATGTATGCATTTGAAAAATTTAAAAAATCTGCTGCTT ATTGGCTTTTAGATTTTTCAAGTTTTGTTGCTTTTAGGGAATATTATTGCAGGTTCCAAGATCCACAGACCTTTAATCTT TTATTTAGTAAAGAAATCTTAAAAAGAGATCCAAAAGCTTTAATGCGACTTAGAGAAACTCTTAATGTTGAGATCAATAT TCAACAAGTATTGCAATATTTCTTTTTTTCACAATTTAAAGCCTTAAAAAGATATGCAAGTAATGTTGGGATTAAAATAA TAAGTGATATGCCTATTTTTATGTTTTATGATTCTGCTGATGTTTGGGCACATCAAAAATATTTTAAATTGAAATTTGAT GCAAGTAAAGATAAAGTAACAGGTATGCCTTCTGGTAATTTGTCTTATAAAAAATATCTTTGGGGTAATGCAGCTTATAA TTGGAAAGCCTTAAGGAAAGATGATTATGTGTGGTGGATTAATCGTATTGGTTTTATGCATAAATATGTAGATATTATTA AATTTGATTATTTTAGAGGATTTGTATCTACTTGGGAAATTTCTGAGCGAGAATTTTCAGTTTATAGTAGTAGTGGGCAG TGGGTCAAATGTCCAGGTAAAGATTTTTTTAGAAATGTTTTAAGTAAAATTAATGATTTAGAAATTTGGGTTGAAGACCT TTTAGAAGATCGTGGTGATGCTTTTAGATTAAGAGATTATTTTAATTTTCCAGAAACTAGAATTATGCAGTTTGCATTTG ATTTTGATTCAAAAAATTTGTGTTTGCCACATAACTATATAAAGAATTGTGTTGTCTATACAAGTACTAATGAGAGTAAT ACTATTCGTCAGTTTATTAATTCTGTCGATGATGAGCATAGAGAGTACATTTTTAATTATTTTAATACTAATGAAGATTT TGTTGTTTGGGATATGATACGAGGTGCAATGTCTAGTGTTGCAGATAATGTAATAGTTTCAATGGAAGATTATCTTGATC ATGTGGTTGATCATAAAAATGTGTCTGGGTCAATGCTTAATGATTTTAGGATCTTGAGTTCTGATTTAAGTACCGATTTA AGTAAAAAAATAAGTAATATTACAAAACTTTATGGAAGAATTTAA
Upstream 100 bases:
>100_bases AATAATGCTTTGTGTGTTTTGTGTTTTAGTTATAATGATAGTATGCATATAGTTGTTTTAACTTTTTAATTAAATGATCT ATTGTTTTGAGGTATAAGAA
Downstream 100 bases:
>100_bases GTAGTAATTTTAATTATTTGTTAAAATAATATTTGTTTTTAAATCTATTTTAAAAAAGGTTGGATGTTGTTTATATGAGA CTTAATACATGCTTAATGTT
Product: 4-alpha-glucanotransferase
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MKRKSGILLSISSLPSQYGIGDLGKGAYEFIDFLASSSQSYWQILLYSLPNCSGVPYLSYSAFAGNISYIDLNAIDRFID VDLGIFGCLEDRCIDYDKLKTKNIILRDAALNFLHRATIDEMYAFEKFKKSAAYWLLDFSSFVAFREYYCRFQDPQTFNL LFSKEILKRDPKALMRLRETLNVEINIQQVLQYFFFSQFKALKRYASNVGIKIISDMPIFMFYDSADVWAHQKYFKLKFD ASKDKVTGMPSGNLSYKKYLWGNAAYNWKALRKDDYVWWINRIGFMHKYVDIIKFDYFRGFVSTWEISEREFSVYSSSGQ WVKCPGKDFFRNVLSKINDLEIWVEDLLEDRGDAFRLRDYFNFPETRIMQFAFDFDSKNLCLPHNYIKNCVVYTSTNESN TIRQFINSVDDEHREYIFNYFNTNEDFVVWDMIRGAMSSVADNVIVSMEDYLDHVVDHKNVSGSMLNDFRILSSDLSTDL SKKISNITKLYGRI
Sequences:
>Translated_494_residues MKRKSGILLSISSLPSQYGIGDLGKGAYEFIDFLASSSQSYWQILLYSLPNCSGVPYLSYSAFAGNISYIDLNAIDRFID VDLGIFGCLEDRCIDYDKLKTKNIILRDAALNFLHRATIDEMYAFEKFKKSAAYWLLDFSSFVAFREYYCRFQDPQTFNL LFSKEILKRDPKALMRLRETLNVEINIQQVLQYFFFSQFKALKRYASNVGIKIISDMPIFMFYDSADVWAHQKYFKLKFD ASKDKVTGMPSGNLSYKKYLWGNAAYNWKALRKDDYVWWINRIGFMHKYVDIIKFDYFRGFVSTWEISEREFSVYSSSGQ WVKCPGKDFFRNVLSKINDLEIWVEDLLEDRGDAFRLRDYFNFPETRIMQFAFDFDSKNLCLPHNYIKNCVVYTSTNESN TIRQFINSVDDEHREYIFNYFNTNEDFVVWDMIRGAMSSVADNVIVSMEDYLDHVVDHKNVSGSMLNDFRILSSDLSTDL SKKISNITKLYGRI >Mature_494_residues MKRKSGILLSISSLPSQYGIGDLGKGAYEFIDFLASSSQSYWQILLYSLPNCSGVPYLSYSAFAGNISYIDLNAIDRFID VDLGIFGCLEDRCIDYDKLKTKNIILRDAALNFLHRATIDEMYAFEKFKKSAAYWLLDFSSFVAFREYYCRFQDPQTFNL LFSKEILKRDPKALMRLRETLNVEINIQQVLQYFFFSQFKALKRYASNVGIKIISDMPIFMFYDSADVWAHQKYFKLKFD ASKDKVTGMPSGNLSYKKYLWGNAAYNWKALRKDDYVWWINRIGFMHKYVDIIKFDYFRGFVSTWEISEREFSVYSSSGQ WVKCPGKDFFRNVLSKINDLEIWVEDLLEDRGDAFRLRDYFNFPETRIMQFAFDFDSKNLCLPHNYIKNCVVYTSTNESN TIRQFINSVDDEHREYIFNYFNTNEDFVVWDMIRGAMSSVADNVIVSMEDYLDHVVDHKNVSGSMLNDFRILSSDLSTDL SKKISNITKLYGRI
Specific function: Unknown
COG id: COG1640
COG function: function code G; 4-alpha-glucanotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disproportionating enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003385 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02446 Glyco_hydro_77 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 58010; Mature: 58010
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKSGILLSISSLPSQYGIGDLGKGAYEFIDFLASSSQSYWQILLYSLPNCSGVPYLSY CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEE SAFAGNISYIDLNAIDRFIDVDLGIFGCLEDRCIDYDKLKTKNIILRDAALNFLHRATID CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEHHHHHHHHHHHHHH EMYAFEKFKKSAAYWLLDFSSFVAFREYYCRFQDPQTFNLLFSKEILKRDPKALMRLRET HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH LNVEINIQQVLQYFFFSQFKALKRYASNVGIKIISDMPIFMFYDSADVWAHQKYFKLKFD CCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCHHHCCEEEEEEEC ASKDKVTGMPSGNLSYKKYLWGNAAYNWKALRKDDYVWWINRIGFMHKYVDIIKFDYFRG CCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHH FVSTWEISEREFSVYSSSGQWVKCPGKDFFRNVLSKINDLEIWVEDLLEDRGDAFRLRDY HHHHEECCCCEEEEEECCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEHHH FNFPETRIMQFAFDFDSKNLCLPHNYIKNCVVYTSTNESNTIRQFINSVDDEHREYIFNY CCCCHHHHEEEEEECCCCCEECCHHHHCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHH FNTNEDFVVWDMIRGAMSSVADNVIVSMEDYLDHVVDHKNVSGSMLNDFRILSSDLSTDL CCCCCCEEHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH SKKISNITKLYGRI HHHHHHHHHHHHCC >Mature Secondary Structure MKRKSGILLSISSLPSQYGIGDLGKGAYEFIDFLASSSQSYWQILLYSLPNCSGVPYLSY CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEE SAFAGNISYIDLNAIDRFIDVDLGIFGCLEDRCIDYDKLKTKNIILRDAALNFLHRATID CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEHHHHHHHHHHHHHH EMYAFEKFKKSAAYWLLDFSSFVAFREYYCRFQDPQTFNLLFSKEILKRDPKALMRLRET HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH LNVEINIQQVLQYFFFSQFKALKRYASNVGIKIISDMPIFMFYDSADVWAHQKYFKLKFD CCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCHHHCCEEEEEEEC ASKDKVTGMPSGNLSYKKYLWGNAAYNWKALRKDDYVWWINRIGFMHKYVDIIKFDYFRG CCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHH FVSTWEISEREFSVYSSSGQWVKCPGKDFFRNVLSKINDLEIWVEDLLEDRGDAFRLRDY HHHHEECCCCEEEEEECCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEHHH FNFPETRIMQFAFDFDSKNLCLPHNYIKNCVVYTSTNESNTIRQFINSVDDEHREYIFNY CCCCHHHHEEEEEECCCCCEECCHHHHCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHH FNTNEDFVVWDMIRGAMSSVADNVIVSMEDYLDHVVDHKNVSGSMLNDFRILSSDLSTDL CCCCCCEEHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH SKKISNITKLYGRI HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6297760; 11463916 [H]