| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is malX [H]
Identifier: 203284041
GI number: 203284041
Start: 124529
End: 126235
Strand: Reverse
Name: malX [H]
Synonym: BDU_119
Alternate gene names: 203284041
Gene position: 126235-124529 (Counterclockwise)
Preceding gene: 203284043
Following gene: 203284040
Centisome position: 13.55
GC content: 29.58
Gene sequence:
>1707_bases ATGGAGAGGTTCAGCGTGATAGGTTTTTTAAAAATTTTGAAATTTGCTAATTTGCAAAAGTTTTCTAGTGCAGTGAGATT GCCAATTTCTGTTACTACGATTTTTTCTTTGATGCTGGGTATAGGGTCAGCATTTTTAAATCCTTCTAATTTATTTTATA TTGATAATGCTGTTTTTAAATTGATTTTGGGTCTTATTAAAAGTATAAGCAATATTGTTATATTAAATATTCCTTTATTT TTTGTTATAGGTATTGCTGTTGTTGTTGCTAGAGTTCAAAAAGGTACTGCTGCGCTTTTAGGTCTTGTTGGATATTTAAT TTTTAACGTTACTGAAAATTATTTTCTTGGGGTATTTTCAGGATTAGCTGAATCTGATTTGATGTCTTCTGTTGGACAAG TTAAAGTTTTAGGAATCCAAACTTTAAACACAGGTATTTTGGGTGGTTTATCGGTTGGGCTTTTAGTTGGTTATTTACAT AATAGATTTTGTAATATTGAATTACCAGGACCTTTTGATATTTTTTCTGGAATTAGATTTGTTTCTATGGTAATTTTTCC TTTTTGTATTTTATTGGGAGTATTATTTTTTTTAATTTGGCCTTATTTTAATGAACTTATCACTTCTTTTGGATTTTTTA TTGCTAAGTTAGATTATTATGGTAGTTTTTTTTATGGATTTTTAAACAGAATACTCATTCCTTTAGGACTTCATTCTATT TTGACATTCCCTTTTAATTTTACTTCTTTGGGAGGATCTGAAATAATTAATGATCAGGTTGTTGGTGGTATTCAGAATAT ATTTTATGCTCAATTGTCAGATCCATATCTTACAAAATTTTCTTCAAGTATTTCTAGATTCAATAGTGGATTTTATCTTT CTATTATGTTTGGACTTCCTGGGGCAGCATTTGGAGTTTATAGAGGGATTATTCATGATGATAAGCGTAAGATCTTAGCA TTGTTATTTCCAGGGGCTTTTGCAGCTTTTTTTACTGGCATTACAGAACCTTTAGAGTTTTTATTTGTTTTTACAGCTCC TTTGCTTTATTTTGTGCATGCTATTTATACTGGATTTGCATTGTTAATTGCTAATATACTTGATATTTCAGTTGGTATGA CTTTTTCTGCTGGATTTTTGGATTTTGTTATGTTTGGGATATTACAAGGGCATGATAAGACAAATTGGCTCTATTTGTTA CCATTAGGTTTGTTATTTTTTGCTTTGTATTATTTTACTTTTAAATGGGTTTATAATTATTTTGATTTTCAAATTCTTGG TGTTGGAGAGCCGTTTTTTGCTGGAAGTGAAGGTGAAGTTGAAGGGATGGGGATTGCTCATTTAATAGTTCAAGGACTTG GAGGTCTTGATAATATTCAAGAATTTGGTGTTGTATCGACAAATTTAAACTTTGTGGTTTTCAGTCCAGAACTTAGGTTT GAAGATTTTCTTAAAAAAACAGGTGCTTTGAATATTGTTACAGTTGGTAATACAATTCAAATTGATTATGGAACAAATGT TTATTATATAAAACAGGCTATTGAAAACTATTCTTCCAAAAGTTTGTTTAAAGCCAGTGTTATTGTTGCATCTGAGAATA TAAGACAAGGAATTAAAGCATATATTGATATGAAAGAAGATGATAAGCGTGAAAAACAAGGAGCAACAGGGAAGCTTTAT AAGCTTAATAAAGATGATAGAGATTAA
Upstream 100 bases:
>100_bases TGGAACTAGAGATTATGTTAATTTTCTTATTAAATTTTTATATTAAAATCTAACTTTTTCTAAAAAAAGCAATATAATGT TGAATTGTCTTAATTTTTAG
Downstream 100 bases:
>100_bases ACTTGAGAGTATAATAAAAATTATAGATTTATAACTACTAAATAGTAAATTATTTTTTATGATTGATTTAAGTATCTTTT TGAAGGAATGAAAATTTAAA
Product: PTS system, maltose and glucose-specific IIBC component
Products: NA
Alternate protein names: EII-Glc/EIII-Glc; EIICBA-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component; Glucose-specific phosphotransferase enzyme IIA component; PTS system glucose-specific EIIA component [H]
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MERFSVIGFLKILKFANLQKFSSAVRLPISVTTIFSLMLGIGSAFLNPSNLFYIDNAVFKLILGLIKSISNIVILNIPLF FVIGIAVVVARVQKGTAALLGLVGYLIFNVTENYFLGVFSGLAESDLMSSVGQVKVLGIQTLNTGILGGLSVGLLVGYLH NRFCNIELPGPFDIFSGIRFVSMVIFPFCILLGVLFFLIWPYFNELITSFGFFIAKLDYYGSFFYGFLNRILIPLGLHSI LTFPFNFTSLGGSEIINDQVVGGIQNIFYAQLSDPYLTKFSSSISRFNSGFYLSIMFGLPGAAFGVYRGIIHDDKRKILA LLFPGAFAAFFTGITEPLEFLFVFTAPLLYFVHAIYTGFALLIANILDISVGMTFSAGFLDFVMFGILQGHDKTNWLYLL PLGLLFFALYYFTFKWVYNYFDFQILGVGEPFFAGSEGEVEGMGIAHLIVQGLGGLDNIQEFGVVSTNLNFVVFSPELRF EDFLKKTGALNIVTVGNTIQIDYGTNVYYIKQAIENYSSKSLFKASVIVASENIRQGIKAYIDMKEDDKREKQGATGKLY KLNKDDRD
Sequences:
>Translated_568_residues MERFSVIGFLKILKFANLQKFSSAVRLPISVTTIFSLMLGIGSAFLNPSNLFYIDNAVFKLILGLIKSISNIVILNIPLF FVIGIAVVVARVQKGTAALLGLVGYLIFNVTENYFLGVFSGLAESDLMSSVGQVKVLGIQTLNTGILGGLSVGLLVGYLH NRFCNIELPGPFDIFSGIRFVSMVIFPFCILLGVLFFLIWPYFNELITSFGFFIAKLDYYGSFFYGFLNRILIPLGLHSI LTFPFNFTSLGGSEIINDQVVGGIQNIFYAQLSDPYLTKFSSSISRFNSGFYLSIMFGLPGAAFGVYRGIIHDDKRKILA LLFPGAFAAFFTGITEPLEFLFVFTAPLLYFVHAIYTGFALLIANILDISVGMTFSAGFLDFVMFGILQGHDKTNWLYLL PLGLLFFALYYFTFKWVYNYFDFQILGVGEPFFAGSEGEVEGMGIAHLIVQGLGGLDNIQEFGVVSTNLNFVVFSPELRF EDFLKKTGALNIVTVGNTIQIDYGTNVYYIKQAIENYSSKSLFKASVIVASENIRQGIKAYIDMKEDDKREKQGATGKLY KLNKDDRD >Mature_568_residues MERFSVIGFLKILKFANLQKFSSAVRLPISVTTIFSLMLGIGSAFLNPSNLFYIDNAVFKLILGLIKSISNIVILNIPLF FVIGIAVVVARVQKGTAALLGLVGYLIFNVTENYFLGVFSGLAESDLMSSVGQVKVLGIQTLNTGILGGLSVGLLVGYLH NRFCNIELPGPFDIFSGIRFVSMVIFPFCILLGVLFFLIWPYFNELITSFGFFIAKLDYYGSFFYGFLNRILIPLGLHSI LTFPFNFTSLGGSEIINDQVVGGIQNIFYAQLSDPYLTKFSSSISRFNSGFYLSIMFGLPGAAFGVYRGIIHDDKRKILA LLFPGAFAAFFTGITEPLEFLFVFTAPLLYFVHAIYTGFALLIANILDISVGMTFSAGFLDFVMFGILQGHDKTNWLYLL PLGLLFFALYYFTFKWVYNYFDFQILGVGEPFFAGSEGEVEGMGIAHLIVQGLGGLDNIQEFGVVSTNLNFVVFSPELRF EDFLKKTGALNIVTVGNTIQIDYGTNVYYIKQAIENYSSKSLFKASVIVASENIRQGIKAYIDMKEDDKREKQGATGKLY KLNKDDRD
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787908, Length=511, Percent_Identity=33.4637964774951, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI1787343, Length=505, Percent_Identity=30.6930693069307, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1786894, Length=517, Percent_Identity=30.7543520309478, Blast_Score=174, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 63138; Mature: 63138
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFSVIGFLKILKFANLQKFSSAVRLPISVTTIFSLMLGIGSAFLNPSNLFYIDNAVFK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH LILGLIKSISNIVILNIPLFFVIGIAVVVARVQKGTAALLGLVGYLIFNVTENYFLGVFS HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH GLAESDLMSSVGQVKVLGIQTLNTGILGGLSVGLLVGYLHNRFCNIELPGPFDIFSGIRF HHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHH VSMVIFPFCILLGVLFFLIWPYFNELITSFGFFIAKLDYYGSFFYGFLNRILIPLGLHSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LTFPFNFTSLGGSEIINDQVVGGIQNIFYAQLSDPYLTKFSSSISRFNSGFYLSIMFGLP HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCC GAAFGVYRGIIHDDKRKILALLFPGAFAAFFTGITEPLEFLFVFTAPLLYFVHAIYTGFA CHHHHHHHHHHCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIANILDISVGMTFSAGFLDFVMFGILQGHDKTNWLYLLPLGLLFFALYYFTFKWVYNY HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH FDFQILGVGEPFFAGSEGEVEGMGIAHLIVQGLGGLDNIQEFGVVSTNLNFVVFSPELRF HCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCEEEECCEEEEECCCCCH EDFLKKTGALNIVTVGNTIQIDYGTNVYYIKQAIENYSSKSLFKASVIVASENIRQGIKA HHHHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHCCCCCHHHHHHEEEECHHHHHHHHH YIDMKEDDKREKQGATGKLYKLNKDDRD HHCCCCCHHHHHCCCCCEEEECCCCCCC >Mature Secondary Structure MERFSVIGFLKILKFANLQKFSSAVRLPISVTTIFSLMLGIGSAFLNPSNLFYIDNAVFK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH LILGLIKSISNIVILNIPLFFVIGIAVVVARVQKGTAALLGLVGYLIFNVTENYFLGVFS HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH GLAESDLMSSVGQVKVLGIQTLNTGILGGLSVGLLVGYLHNRFCNIELPGPFDIFSGIRF HHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHH VSMVIFPFCILLGVLFFLIWPYFNELITSFGFFIAKLDYYGSFFYGFLNRILIPLGLHSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH LTFPFNFTSLGGSEIINDQVVGGIQNIFYAQLSDPYLTKFSSSISRFNSGFYLSIMFGLP HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCC GAAFGVYRGIIHDDKRKILALLFPGAFAAFFTGITEPLEFLFVFTAPLLYFVHAIYTGFA CHHHHHHHHHHCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIANILDISVGMTFSAGFLDFVMFGILQGHDKTNWLYLLPLGLLFFALYYFTFKWVYNY HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH FDFQILGVGEPFFAGSEGEVEGMGIAHLIVQGLGGLDNIQEFGVVSTNLNFVVFSPELRF HCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCEEEECCEEEEECCCCCH EDFLKKTGALNIVTVGNTIQIDYGTNVYYIKQAIENYSSKSLFKASVIVASENIRQGIKA HHHHHHCCCEEEEEECCEEEEECCCCCHHHHHHHHCCCCCHHHHHHEEEECHHHHHHHHH YIDMKEDDKREKQGATGKLYKLNKDDRD HHCCCCCHHHHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1508157; 9384377; 2497294; 2120236; 1911744; 1906345; 9593197 [H]