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The map label for this gene is udk

Identifier: 203283945

GI number: 203283945

Start: 26719

End: 27339

Strand: Reverse

Name: udk

Synonym: BDU_21

Alternate gene names: 203283945

Gene position: 27339-26719 (Counterclockwise)

Preceding gene: 203283946

Following gene: 203283937

Centisome position: 2.93

GC content: 28.5

Gene sequence:

>621_bases
ATGGTTAAGATTATCGGAATATCTGGTGGATCTGGAAGTGGTAAAACTACAATTGTTAATAAAATTAGTGAAGTTATTTC
TGAATTCGTTCTTATATCTCAGGACAATTATTATAAAAGTGTTGGGGATTATGAGTATGAGTTTTTAGATGTTAATTTTG
ATCATCCCGATGCTTTTGATAATAATTTATTTTATAAGCAATTGAAAAAATTAAAAGAAAATCAATCGATTAATATGCCA
CTTTATGATTTTATTAACCATAAAAGAAGAGATGAAACTATTAAGATAGTGCCTACTCCTATTATTATTGTTGAAGGTAT
TATGATTTTTGTTGAGGAACGTGTACGTAATTTAATAGATTTGAAGATATATATCGATACTCCTAATGATATTAGATTTA
TTAGAAGGCTTGAACGAGATATGTCTAAGAGAGGGCGTACATTAGAGTCTGTTATTGAGCAATATTTACGTACAACCAGA
GCAGGATATTACAGGTTTATTGAACCTACTAAGGAATATGCTGATTTAATTATTCCTGAAGGAGGACACAATGATAAAGC
TCTTTATGTTCTTTCATCTTTTTTAAAGACACTTGTAAAGGATAGTTCAAAATTTTTTTAA

Upstream 100 bases:

>100_bases
GAAGCTGAGAAGCTTTTAAAAGGGTTAGGGTTTAAAAATGTATTTGTAGCAGGAACATTGAAAAATATGCCTAAATTGCC
CGGCTCTAAAGAAGAGATTA

Downstream 100 bases:

>100_bases
AGTAGTGAAAGAGGATAATAATCTATTTCAATATATGTGTCTTTTGTATTTTTTATTCTTTCTTTTGTATTGCGTATTAA
CTTTTCAAGTGGGTTAAATG

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MVKIIGISGGSGSGKTTIVNKISEVISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKLKENQSINMP
LYDFINHKRRDETIKIVPTPIIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTR
AGYYRFIEPTKEYADLIIPEGGHNDKALYVLSSFLKTLVKDSSKFF

Sequences:

>Translated_206_residues
MVKIIGISGGSGSGKTTIVNKISEVISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKLKENQSINMP
LYDFINHKRRDETIKIVPTPIIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTR
AGYYRFIEPTKEYADLIIPEGGHNDKALYVLSSFLKTLVKDSSKFF
>Mature_206_residues
MVKIIGISGGSGSGKTTIVNKISEVISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFDNNLFYKQLKKLKENQSINMP
LYDFINHKRRDETIKIVPTPIIIVEGIMIFVEERVRNLIDLKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTR
AGYYRFIEPTKEYADLIIPEGGHNDKALYVLSSFLKTLVKDSSKFF

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family

Homologues:

Organism=Homo sapiens, GI18699734, Length=193, Percent_Identity=39.3782383419689, Blast_Score=167, Evalue=4e-42,
Organism=Homo sapiens, GI57863312, Length=189, Percent_Identity=42.3280423280423, Blast_Score=163, Evalue=8e-41,
Organism=Homo sapiens, GI301129207, Length=189, Percent_Identity=42.3280423280423, Blast_Score=163, Evalue=8e-41,
Organism=Homo sapiens, GI13899253, Length=208, Percent_Identity=36.5384615384615, Blast_Score=157, Evalue=6e-39,
Organism=Homo sapiens, GI209863022, Length=145, Percent_Identity=37.2413793103448, Blast_Score=120, Evalue=1e-27,
Organism=Escherichia coli, GI87082034, Length=197, Percent_Identity=39.0862944162437, Blast_Score=166, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI17539892, Length=203, Percent_Identity=38.423645320197, Blast_Score=159, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI17539894, Length=203, Percent_Identity=38.423645320197, Blast_Score=159, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI71981181, Length=206, Percent_Identity=30.0970873786408, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6324339, Length=189, Percent_Identity=35.978835978836, Blast_Score=119, Evalue=3e-28,
Organism=Drosophila melanogaster, GI28573516, Length=202, Percent_Identity=41.5841584158416, Blast_Score=168, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28573514, Length=202, Percent_Identity=41.5841584158416, Blast_Score=168, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28573512, Length=202, Percent_Identity=41.5841584158416, Blast_Score=168, Evalue=2e-42,
Organism=Drosophila melanogaster, GI45550449, Length=202, Percent_Identity=41.5841584158416, Blast_Score=168, Evalue=3e-42,
Organism=Drosophila melanogaster, GI221458995, Length=214, Percent_Identity=32.2429906542056, Blast_Score=140, Evalue=4e-34,
Organism=Drosophila melanogaster, GI24649624, Length=198, Percent_Identity=34.3434343434343, Blast_Score=140, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URK_BORDL (B5RLM3)

Other databases:

- EMBL:   CP000976
- RefSeq:   YP_002221685.1
- ProteinModelPortal:   B5RLM3
- EnsemblBacteria:   EBBORT00000001652
- GeneID:   6918105
- GenomeReviews:   CP000976_GR
- KEGG:   bdu:BDU_21
- GeneTree:   EBGT00050000007051
- HOGENOM:   HBG527126
- OMA:   NQFVEPT
- ProtClustDB:   PRK05480
- GO:   GO:0005737
- HAMAP:   MF_00551
- InterPro:   IPR006083
- InterPro:   IPR000764
- PANTHER:   PTHR10285:SF6
- PRINTS:   PR00988
- TIGRFAMs:   TIGR00235

Pfam domain/function: PF00485 PRK

EC number: =2.7.1.48

Molecular weight: Translated: 24069; Mature: 24069

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKIIGISGGSGSGKTTIVNKISEVISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFD
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEEEEECCCCCCCC
NNLFYKQLKKLKENQSINMPLYDFINHKRRDETIKIVPTPIIIVEGIMIFVEERVRNLID
CCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHEE
LKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTRAGYYRFIEPTKEYADLIIPE
EEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHCEECCC
GGHNDKALYVLSSFLKTLVKDSSKFF
CCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVKIIGISGGSGSGKTTIVNKISEVISEFVLISQDNYYKSVGDYEYEFLDVNFDHPDAFD
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEEEEECCCCCCCC
NNLFYKQLKKLKENQSINMPLYDFINHKRRDETIKIVPTPIIIVEGIMIFVEERVRNLID
CCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHEE
LKIYIDTPNDIRFIRRLERDMSKRGRTLESVIEQYLRTTRAGYYRFIEPTKEYADLIIPE
EEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHCEECCC
GGHNDKALYVLSSFLKTLVKDSSKFF
CCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA