| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203283933
Identifier: 203283933
GI number: 203283933
Start: 13801
End: 15294
Strand: Reverse
Name: 203283933
Synonym: BDU_9
Alternate gene names: NA
Gene position: 15294-13801 (Counterclockwise)
Preceding gene: 203283935
Following gene: 203283932
Centisome position: 1.64
GC content: 25.44
Gene sequence:
>1494_bases TTGTATTTATTTACCTTATGTTTGAATGAGGTTTTTAGTATGTGTGAAGTAATAGATAAAGTTTTTTCTCAAAAAGTACT TAATATGCTTAATATGCATGACCTTAAAGGGTTAGATATATCTTTTAAAACTTTTCCAAGTGAAAGTCATAGTAATATTT TGAGTCTTACTGATAATTTTGTTAAATTAAAATTTAGAAAAGAACTTGTTGAAAATAATTTGAAAAAATATTTTGATGAT TATAGAAAGTTTTTATTCTCATCAGAAGGTGATTTTTATGTTTTTACTGCTGATAATTTAAGAAAGATAGGATTGTCACT TTATCCTTATTTTTCGTTTGGGATTTTAAATGGAGGTTCTGCAACTAGTTATTTTGATCTACTTAAAAATAGTGATTTTA ATAATGACTTATATTTTTTATATGCAAATAAAATATTAGAAGCTAAGGAATTTTTTGGACATTTGCCCAAAGGAATTACA CCTGCGTATGTTAATGCAGATGGTAGTTATGGATTTTCGTTTTTAGAATTAAAAATTCGACATCTTTTATTGCTGTCTAG GCAGTATTATGAACTTTATGGTGAAAATATTAAACCTTCTATTTTTCAAATGACAAGTGTTAAGACTTATAAGTTAATTT CTGATTTTTTAGACGGTATTTTTGATAATAATTTGATTAAGAGTTTAAATTATTGTGATTTTTGTAAATCGGATATTTTA ACAGCAATTCAGCCTTTGGTGTATTGTTATAAAGAGTTAAGTGATGGTCATTATGAATATTTTGATTATGTTAATAATGG AAAGAAAGTTTTTTTAGCTTTACCTGCAGGACATGGTCAAAATTTTAAAATTTTGAGGGATATTTATATGCAACTTTATA ATTCAGGTAAAAAATTTGTATATATTGGGAACATTGATAATGTTGGTTTTACTGTTAATTTAAAAACACTTGCTATAATG GCTATAACTAATGATTCTGCTGGATTTGAGTTTAGTGTTAAGACACCACTAGATACAAAGGGAGGGATTTTAATTTTAGA TGATGATAATAATTTAAACTGTGTTGATATTGGTAGTGTTATTTCTAGAGAAACAGTGTTGCAATTTGAGTACAAAGGAG GTAAGATTTTTTTTAATTGTGCTACAGGTCTTTTTAATTTGGAGTATTTGATCAAAAATATTGATAGAATAATATCAGAT ATGCCTATGAGAGTTATTGAACAGACTAAAGAATTTGGCAAATATACTTCAATTGAGCAAATAACATGGGAAGTTATAAA GATGGTAGATAATCCATTGATTTTTGAGGTTAATAGGGAAGATAGATTTTTACCTGCTAAATTATTTATTAATACACTTA TTATGAGTAATTATATGAGTGATAAATTTTCAGATGCATTTTTTGATATTGCTAAATACTTAAATATTGGTCTTAATAAT GTATTACAGAATAAATATAATTTGGATTTTAAGAAAGGTAAATGGAATGTTTAG
Upstream 100 bases:
>100_bases TAGACTTTTTTAAGTTTGTCATATTTAATATATAATTTTTTAACATGTTTTTTCTCTTAATTAGTATAGTACTACAATAA ATGCTAATATTAAAATATAA
Downstream 100 bases:
>100_bases ATTGATATTATTTGTACTTTTGTTTTTTCATTTTGTTTTATTGGGTTCTATTCCAGATATAGATTATGATTATTTTGAAA GTGATAAATTTGATCTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MYLFTLCLNEVFSMCEVIDKVFSQKVLNMLNMHDLKGLDISFKTFPSESHSNILSLTDNFVKLKFRKELVENNLKKYFDD YRKFLFSSEGDFYVFTADNLRKIGLSLYPYFSFGILNGGSATSYFDLLKNSDFNNDLYFLYANKILEAKEFFGHLPKGIT PAYVNADGSYGFSFLELKIRHLLLLSRQYYELYGENIKPSIFQMTSVKTYKLISDFLDGIFDNNLIKSLNYCDFCKSDIL TAIQPLVYCYKELSDGHYEYFDYVNNGKKVFLALPAGHGQNFKILRDIYMQLYNSGKKFVYIGNIDNVGFTVNLKTLAIM AITNDSAGFEFSVKTPLDTKGGILILDDDNNLNCVDIGSVISRETVLQFEYKGGKIFFNCATGLFNLEYLIKNIDRIISD MPMRVIEQTKEFGKYTSIEQITWEVIKMVDNPLIFEVNREDRFLPAKLFINTLIMSNYMSDKFSDAFFDIAKYLNIGLNN VLQNKYNLDFKKGKWNV
Sequences:
>Translated_497_residues MYLFTLCLNEVFSMCEVIDKVFSQKVLNMLNMHDLKGLDISFKTFPSESHSNILSLTDNFVKLKFRKELVENNLKKYFDD YRKFLFSSEGDFYVFTADNLRKIGLSLYPYFSFGILNGGSATSYFDLLKNSDFNNDLYFLYANKILEAKEFFGHLPKGIT PAYVNADGSYGFSFLELKIRHLLLLSRQYYELYGENIKPSIFQMTSVKTYKLISDFLDGIFDNNLIKSLNYCDFCKSDIL TAIQPLVYCYKELSDGHYEYFDYVNNGKKVFLALPAGHGQNFKILRDIYMQLYNSGKKFVYIGNIDNVGFTVNLKTLAIM AITNDSAGFEFSVKTPLDTKGGILILDDDNNLNCVDIGSVISRETVLQFEYKGGKIFFNCATGLFNLEYLIKNIDRIISD MPMRVIEQTKEFGKYTSIEQITWEVIKMVDNPLIFEVNREDRFLPAKLFINTLIMSNYMSDKFSDAFFDIAKYLNIGLNN VLQNKYNLDFKKGKWNV >Mature_497_residues MYLFTLCLNEVFSMCEVIDKVFSQKVLNMLNMHDLKGLDISFKTFPSESHSNILSLTDNFVKLKFRKELVENNLKKYFDD YRKFLFSSEGDFYVFTADNLRKIGLSLYPYFSFGILNGGSATSYFDLLKNSDFNNDLYFLYANKILEAKEFFGHLPKGIT PAYVNADGSYGFSFLELKIRHLLLLSRQYYELYGENIKPSIFQMTSVKTYKLISDFLDGIFDNNLIKSLNYCDFCKSDIL TAIQPLVYCYKELSDGHYEYFDYVNNGKKVFLALPAGHGQNFKILRDIYMQLYNSGKKFVYIGNIDNVGFTVNLKTLAIM AITNDSAGFEFSVKTPLDTKGGILILDDDNNLNCVDIGSVISRETVLQFEYKGGKIFFNCATGLFNLEYLIKNIDRIISD MPMRVIEQTKEFGKYTSIEQITWEVIKMVDNPLIFEVNREDRFLPAKLFINTLIMSNYMSDKFSDAFFDIAKYLNIGLNN VLQNKYNLDFKKGKWNV
Specific function: Unknown
COG id: COG4284
COG function: function code G; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002618 - InterPro: IPR016267 [H]
Pfam domain/function: PF01704 UDPGP [H]
EC number: NA
Molecular weight: Translated: 57506; Mature: 57506
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLFTLCLNEVFSMCEVIDKVFSQKVLNMLNMHDLKGLDISFKTFPSESHSNILSLTDNF CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEECCHH VKLKFRKELVENNLKKYFDDYRKFLFSSEGDFYVFTADNLRKIGLSLYPYFSFGILNGGS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCEEECCEEEEEECCCC ATSYFDLLKNSDFNNDLYFLYANKILEAKEFFGHLPKGITPAYVNADGSYGFSFLELKIR HHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHH HLLLLSRQYYELYGENIKPSIFQMTSVKTYKLISDFLDGIFDNNLIKSLNYCDFCKSDIL HHHHHHHHHHHHHCCCCCCCCEEHHCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHH TAIQPLVYCYKELSDGHYEYFDYVNNGKKVFLALPAGHGQNFKILRDIYMQLYNSGKKFV HHHHHHHHHHHHHCCCCEEEHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE YIGNIDNVGFTVNLKTLAIMAITNDSAGFEFSVKTPLDTKGGILILDDDNNLNCVDIGSV EEECCCCCCEEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEHHHH ISRETVLQFEYKGGKIFFNCATGLFNLEYLIKNIDRIISDMPMRVIEQTKEFGKYTSIEQ HCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHH ITWEVIKMVDNPLIFEVNREDRFLPAKLFINTLIMSNYMSDKFSDAFFDIAKYLNIGLNN HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH VLQNKYNLDFKKGKWNV HHHHCCCCCCCCCCCCC >Mature Secondary Structure MYLFTLCLNEVFSMCEVIDKVFSQKVLNMLNMHDLKGLDISFKTFPSESHSNILSLTDNF CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEECCHH VKLKFRKELVENNLKKYFDDYRKFLFSSEGDFYVFTADNLRKIGLSLYPYFSFGILNGGS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCEEECCEEEEEECCCC ATSYFDLLKNSDFNNDLYFLYANKILEAKEFFGHLPKGITPAYVNADGSYGFSFLELKIR HHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHH HLLLLSRQYYELYGENIKPSIFQMTSVKTYKLISDFLDGIFDNNLIKSLNYCDFCKSDIL HHHHHHHHHHHHHCCCCCCCCEEHHCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHH TAIQPLVYCYKELSDGHYEYFDYVNNGKKVFLALPAGHGQNFKILRDIYMQLYNSGKKFV HHHHHHHHHHHHHCCCCEEEHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE YIGNIDNVGFTVNLKTLAIMAITNDSAGFEFSVKTPLDTKGGILILDDDNNLNCVDIGSV EEECCCCCCEEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEHHHH ISRETVLQFEYKGGKIFFNCATGLFNLEYLIKNIDRIISDMPMRVIEQTKEFGKYTSIEQ HCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHH ITWEVIKMVDNPLIFEVNREDRFLPAKLFINTLIMSNYMSDKFSDAFFDIAKYLNIGLNN HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH VLQNKYNLDFKKGKWNV HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]