Definition Vibrio fischeri MJ11 chromosome I, complete sequence.
Accession NC_011184
Length 2,905,029

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The map label for this gene is rsmD

Identifier: 197336407

GI number:

Start: 2761501

End: 2762103

Strand: Direct

Name: rsmD

Synonym: VFMJ11_2577

Alternate gene names: NA

Gene position: NA

Preceding gene: 197336425

Following gene: 197336404

Centisome position: NA

GC content: NA

Gene sequence:

>603_bases
ATGGTTAAACGTAAACAACACTCACCTCGCACTTCTGGCACAAATGGTCGCTCAGGAAGCATTCGTATTATCAGTGGACG
CTGGCGCGGACGCAAACTTCCAGTACATGATGCAGAAGGGTTACGACCAACCACGGACCGTGTAAAAGAGACTGTTTTTA
ACTGGTTAGCACCTGATATTCCTCGAGCTCGTTGTTTGGATCTTTTTTCTGGTAGCGGCGGTTTAGGTTTTGAAGCCGCT
TCTCGTGGTGCTGAACACGTCGTAATGCTTGAGTTAAATAAACAAGCTCATGCACAACTTAAACAAAATGCAGAGAGTTT
AAAAGCAGATAATATCGAAATTCATCATACCGATGCATTGACGTTTTTAAATCAAGCTGCAACTCCATTTGATGTTGTCT
TTATTGATCCTCCATTTAGAAAAGATTTATTAGAAGAAACCTTAACAAAATTAGAAAATAATGGATGGTTAGCGGCAAAC
GCTATGATATACATTGAAGCAGAAAAAGAGTTAAGCTCATTGCCTGTTCCTGCCCATTGGCATCTAAGCAAAGACAAAAC
CGCAGGACAAGTTACCTTCAAATTATATGAAAGAGAGGAATAG

Upstream 100 bases:

>100_bases
CAATAATCCGCGTTTCTTTTTGCCTGTCATTGGGAAATCCTAGAATTAAATTGGTACAATTTTCTCGTATACTATCACTT
TCTGAGCGGTCAAAAAATCT

Downstream 100 bases:

>100_bases
ATGAAAGGATTGATCATTCTTGCTAAAGCGGCCATTGCCTTTGTATGGTTTATTTTAATTTTAAATTTCTTTATGCCATT
TCCAGGTAAAGCAGCCATTG

Product: RNA methyltransferase, RsmD family

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>200_residues
MVKRKQHSPRTSGTNGRSGSIRIISGRWRGRKLPVHDAEGLRPTTDRVKETVFNWLAPDIPRARCLDLFSGSGGLGFEAA
SRGAEHVVMLELNKQAHAQLKQNAESLKADNIEIHHTDALTFLNQAATPFDVVFIDPPFRKDLLEETLTKLENNGWLAAN
AMIYIEAEKELSSLPVPAHWHLSKDKTAGQVTFKLYEREE

Sequences:
NA

Specific function: NA

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA