| Definition | Vibrio fischeri MJ11 chromosome I, complete sequence. |
|---|---|
| Accession | NC_011184 |
| Length | 2,905,029 |
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The map label for this gene is rsmD
Identifier: 197336407
GI number:
Start: 2761501
End: 2762103
Strand: Direct
Name: rsmD
Synonym: VFMJ11_2577
Alternate gene names: NA
Gene position: NA
Preceding gene: 197336425
Following gene: 197336404
Centisome position: NA
GC content: NA
Gene sequence:
>603_bases ATGGTTAAACGTAAACAACACTCACCTCGCACTTCTGGCACAAATGGTCGCTCAGGAAGCATTCGTATTATCAGTGGACG CTGGCGCGGACGCAAACTTCCAGTACATGATGCAGAAGGGTTACGACCAACCACGGACCGTGTAAAAGAGACTGTTTTTA ACTGGTTAGCACCTGATATTCCTCGAGCTCGTTGTTTGGATCTTTTTTCTGGTAGCGGCGGTTTAGGTTTTGAAGCCGCT TCTCGTGGTGCTGAACACGTCGTAATGCTTGAGTTAAATAAACAAGCTCATGCACAACTTAAACAAAATGCAGAGAGTTT AAAAGCAGATAATATCGAAATTCATCATACCGATGCATTGACGTTTTTAAATCAAGCTGCAACTCCATTTGATGTTGTCT TTATTGATCCTCCATTTAGAAAAGATTTATTAGAAGAAACCTTAACAAAATTAGAAAATAATGGATGGTTAGCGGCAAAC GCTATGATATACATTGAAGCAGAAAAAGAGTTAAGCTCATTGCCTGTTCCTGCCCATTGGCATCTAAGCAAAGACAAAAC CGCAGGACAAGTTACCTTCAAATTATATGAAAGAGAGGAATAG
Upstream 100 bases:
>100_bases CAATAATCCGCGTTTCTTTTTGCCTGTCATTGGGAAATCCTAGAATTAAATTGGTACAATTTTCTCGTATACTATCACTT TCTGAGCGGTCAAAAAATCT
Downstream 100 bases:
>100_bases ATGAAAGGATTGATCATTCTTGCTAAAGCGGCCATTGCCTTTGTATGGTTTATTTTAATTTTAAATTTCTTTATGCCATT TCCAGGTAAAGCAGCCATTG
Product: RNA methyltransferase, RsmD family
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>200_residues MVKRKQHSPRTSGTNGRSGSIRIISGRWRGRKLPVHDAEGLRPTTDRVKETVFNWLAPDIPRARCLDLFSGSGGLGFEAA SRGAEHVVMLELNKQAHAQLKQNAESLKADNIEIHHTDALTFLNQAATPFDVVFIDPPFRKDLLEETLTKLENNGWLAAN AMIYIEAEKELSSLPVPAHWHLSKDKTAGQVTFKLYEREE
Sequences:
NA
Specific function: NA
COG id: COG0742
COG function: function code L; N6-adenine-specific methylase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA