| Definition | Vibrio fischeri MJ11 chromosome I, complete sequence. |
|---|---|
| Accession | NC_011184 |
| Length | 2,905,029 |
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Identifier: 197336315
GI number:
Start: 903887
End: 907294
Strand: Direct
Name: Not Available
Synonym: VFMJ11_0870
Alternate gene names: NA
Gene position: NA
Preceding gene: 197334343
Following gene: 197335815
Centisome position: NA
GC content: NA
Gene sequence:
>3408_bases ATGCTTTTCTTCAGAATACTTACTTTAAGTATTTTTCTCTTTTTCTCTACTTTCACTTTATCACAATCTGAAAGCTCAAT TTTTTACCCAATGCCAATTCATACTGATGGCCAATATATTACCGCTCAACAACTGTTTATGAGAGAAGATGGTGCGGTGT GGATGTATGATATCTATGGGCAACTTCATCTATTTGATGGTGAAAATATTTTTACTATAGGTGAGAAGAGCGATAGAACC TTGCCAAGGAAAATAGCGTATTTTAATGGCGAATTTTGGTTTATTAAAAAAGGAAGTATTCACGCTTGGTCTAAAAAAAC AGGAATGAATGAAGTTTATAGGATGCCAAAAGGCACTAGCATCATAGAAATGAATCAGCAGGATGGTATGCTCTGGGGCA ATGATACCGATAGTTTTTTTGTTTATGACCCAAAGAAAAAGCGTTATTACTCATCTAATATCAATGAAGTAAATACCAGT GCTATTTTAGATGAAATTACGATAACTGGTGCTATACATGTTGATAATCGTTGGTTAGTTTCTACATCTGAGGGGGTTTT TGAGTTTGATATAGCTACAGAAAGCTATACACCTCTTTATCTTGGACAATATATAGATGCTATTTTTTACTCTAAATATA CAGATAAGATATTTTTAGGGACCCATGGCAGTATTTGGTCTTCAGAGCTTTATGATCATGAATTAATCATTAATAAAAAA ATATTAATAAATTCGTCATTACTTTCATTTGCAGAAACAGAAAGTTACTTTTGGTTTGGGACGAGTGATGGGCTATATAA ATGGAATATTTTAAATAGCAAAATAGACCATTTTACTGCGGTTGTTCGTGATGACTACTCTTTAGAAGGTAATAAGGTTT ATTCTGTTATTGCTGATCATAATAATGGCCTTTGGGTTGCCACTGATAATGGTGTGAGTTACTACTCGGACAGCAATCGA TTATTTTCGCGTTTACGCTATAAAGACGTAAACGGATTACTGAATATCAGTGAAATTAATGCGATTACTCAAACATCAGA GAATGATGCGTGGTTAGGTACATCGTCAGGTTTATTATTGATAAACACGGATAACTTATATCAACCAATCGTTACCATAA GTAAGCATTCAATCAATGACCTTACTCATGGTGATCAGTTTGTATGGGCTGCAACGGATAAAGGTATATTGCAAGTCGAT CCACAGTTAAAAAATACCTATATACCTAAAGGCCTCAAACCCGTAGAAGATGAAAGTATCGATCATTTACTATTAAGTGA TGATGATATGTTATGGTTTTCCAGTTCTTATGGTTTGTATAAGTACGACATTCATCAAGATAAATTAGTAAATCTAGGGT TCTCTTGGGCCTTGGATCAGAAGCATTCAATACAAATAACGCACATCTACCAAAATAAGAACAGTCAAATATCCATAGGG ACAAATGTTGGTTTATATCGATATGAGAATGGGGCGTTAACTTTTGATTATGCCTATGTTCATGCTGGCAGTATTTTAGA TATGGTAGATACTGAATATGGAAACTCATGGATTGTCAGTAACTATGGGTTGCAGATCAGTAATAGTAACGGGATAAGAA CGGATATCTCATTACCAACAGAATACACCACACCACATTGTGTATTATCCAGTGATAACGGTGTTTGGCTATCATCAAGT AAAGGGCTTTCTTTATATACCCATCGTGGACGAATCGTAAAGCATTTTGGAACTCAAAGTGGACTTATTAATAATGAGTT ACTTCCTGATCTTTGTTCAATATCCCCAAATGGCGTAATGCTATTTGCAAGTAAAGATGGTGTTATCGTTGCTCATGAGC AGGAGTTAATCGAATACCATCGTCCAAAACCTCACGTAGTATTAGGTCAAATTAAAATTGATTCTGAAATTGTGAATTAT GGAGGTGAGAAAAAGTTAACCAAGCAAGTTCCTTATGGAGCGAATATATCGTTTTTGTTTGGTGTGCTTCCTGAGTTCAA TAACAAATCGCTTTCTTTTCAATTGTTGGGCTCTAATGATGAAGCATGGCAAGATTTTGATGGTAGCTTATTAATCTTTG ATTCGTTGCAATCAGGTAAGTATGAATTACGTATAAAACCACGAAATAATGGTCAGCGAAGAAGTCTTGTGACTGAGGTT GAGTTTTATGTTGAAGTTCCGTGGTTTTTTGCTCCTTGGTTTATCTTCTTTTTATTTAGTTTAGTGAGTGCAATCTTAAT GGGCATTTACTATTGGCGATCTAAAGAAATTAAGAAAAGTAATGAGAAGCTGAAAAAAAGTGTTGAAATCAAAACGAAGC AATTAAGCAATCAAGGTAAAGCGTTAATCTCAAGTAACCGACAATTACAAAAGCTTCTTACTGTTCGTCAGCATGTTATT TCTGAAATGGCAGAACAAGCTAGACAGCCAATAAAAGATATTCAAGCAAATCTACAAAAGAAAGGACTACTTACAAACCT TGCTTTAGCGAATCAATGTGAACACAGTTTACAATTATTAGAGCAACTGACTCATATTGAACCTTTTGTTACGTTACAAA AGAATAAGAGAACCAATCAAGTTTTAGCTCCTTTACTTAGTGCGGCATTAAAAAGTTGGAAAGATGAATACCATACAAAA GGGGTTGAGCTTATCCTTGAGGACAATTCACAAGGCGTTTCTATCTTTGTTCAACCGCTATTGATCGATGCCATTTTTAA TAATGTATTATTTAGTTTATTAAAACGAAGTCAATCAGGTGAGGTAGTCACGATACGTATTCAGTGTGATGACGCACTAG TGGTTGCTTATTTTTTGAGTGAAGGTGCTGAGATATCAGTAACTGAGCTAGATGAATTAGGAAGAGTGGATTTATCACAA ACAATTGAAGTGATTAATCAAGCATTAGGCCTTCCAGCAGTTAAATTACTCACCGTTCAAAATGGTGGGCATTTTGAAAT AATTAAGAACATGTCTGGCTCTAATGAGCTGCAATTTTCGTGGCCAATTGCTATCGATGAATTTATTACGCCTCAAGTAC CAGAGGTTCATTCTAAAGATAAAGACAGTGATGAGCAGAAACAACACCAAGAATGGTTATTAAAAGTCTACCAACTTATT GAAGATAATTACTCTCTGGCGTCTTTTGGTACGAGTGCGGCAGCAAAAGCTCTGTTTATATCGGAACGAAATCTACAACG GAAATTTAAGCAATTAACTCAGCGTTCTTTTATGGAATATTTAATTGATACACGATTAGAAAAAGCGTGTGAACTGCTTA TCTCTGGTCAGAAAGTTGCAGATGCTGCTTTTGAATCAGGTTTTAATGATCCTTCTTATTTTAGTAAGCGTTTTAAGCGT CACTATGGTTTGTCACCAACACAGTTTGTGACTGAGAATGAAGAATAG
Upstream 100 bases:
>100_bases CAGGGCTTTTTTATATCCTTTATCTATGCATTGATTGCTATATAGACGGAGTTTTTCTATGATGTTGATACCCATTCTCT TTTCATTCTAAGGCGAGTAG
Downstream 100 bases:
>100_bases TACGTAACTGAAACGATATAAGATATTTAAAAGAAAATAAGTGATGTATACGATGAAACTTGGTCGATAAATATAGGTAA CGTGTTGAATGTTTGGGCTT
Product: transcriptional regulator, AraC family
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1135_residues MLFFRILTLSIFLFFSTFTLSQSESSIFYPMPIHTDGQYITAQQLFMREDGAVWMYDIYGQLHLFDGENIFTIGEKSDRT LPRKIAYFNGEFWFIKKGSIHAWSKKTGMNEVYRMPKGTSIIEMNQQDGMLWGNDTDSFFVYDPKKKRYYSSNINEVNTS AILDEITITGAIHVDNRWLVSTSEGVFEFDIATESYTPLYLGQYIDAIFYSKYTDKIFLGTHGSIWSSELYDHELIINKK ILINSSLLSFAETESYFWFGTSDGLYKWNILNSKIDHFTAVVRDDYSLEGNKVYSVIADHNNGLWVATDNGVSYYSDSNR LFSRLRYKDVNGLLNISEINAITQTSENDAWLGTSSGLLLINTDNLYQPIVTISKHSINDLTHGDQFVWAATDKGILQVD PQLKNTYIPKGLKPVEDESIDHLLLSDDDMLWFSSSYGLYKYDIHQDKLVNLGFSWALDQKHSIQITHIYQNKNSQISIG TNVGLYRYENGALTFDYAYVHAGSILDMVDTEYGNSWIVSNYGLQISNSNGIRTDISLPTEYTTPHCVLSSDNGVWLSSS KGLSLYTHRGRIVKHFGTQSGLINNELLPDLCSISPNGVMLFASKDGVIVAHEQELIEYHRPKPHVVLGQIKIDSEIVNY GGEKKLTKQVPYGANISFLFGVLPEFNNKSLSFQLLGSNDEAWQDFDGSLLIFDSLQSGKYELRIKPRNNGQRRSLVTEV EFYVEVPWFFAPWFIFFLFSLVSAILMGIYYWRSKEIKKSNEKLKKSVEIKTKQLSNQGKALISSNRQLQKLLTVRQHVI SEMAEQARQPIKDIQANLQKKGLLTNLALANQCEHSLQLLEQLTHIEPFVTLQKNKRTNQVLAPLLSAALKSWKDEYHTK GVELILEDNSQGVSIFVQPLLIDAIFNNVLFSLLKRSQSGEVVTIRIQCDDALVVAYFLSEGAEISVTELDELGRVDLSQ TIEVINQALGLPAVKLLTVQNGGHFEIIKNMSGSNELQFSWPIAIDEFITPQVPEVHSKDKDSDEQKQHQEWLLKVYQLI EDNYSLASFGTSAAAKALFISERNLQRKFKQLTQRSFMEYLIDTRLEKACELLISGQKVADAAFESGFNDPSYFSKRFKR HYGLSPTQFVTENEE
Sequences:
NA
Specific function: NA
COG id: COG3292
COG function: function code T; Predicted periplasmic ligand-binding sensor domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA